PDB 4V8O
X-RAY DIFFRACTION3.80 Å0 chains58 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain ABview chain
1 domainChain ACview chain
2 domainsChain ADview chain
1 domainChain AEview chain
2 domainsChain AFview chain
1 domainChain AGview chain
1 domainChain AHview chain
2 domainsChain AIview chain
1 domainChain AJview chain
1 domainChain AKview chain
1 domainChain ALview chain
1 domainChain AMview chain
1 domainChain ANview chain
1 domainChain AOview chain
1 domainChain APview chain
1 domainChain AQview chain
1 domainChain ARview chain
1 domainChain ASview chain
1 domainChain ATview chain
1 domainChain B0view chain
1 domainChain B1view chain
1 domainChain B2view chain
1 domainChain B3view chain
1 domainChain B4view chain
1 domainChain B5view chain
1 domainChain B6view chain
1 domainChain B7view chain
1 domainChain B8view chain
1 domainChain B9view chain
1 domainChain BCview chain
2 domainsChain BDview chain
2 domainsChain BEview chain
1 domainChain BFview chain
1 domainChain BGview chain
1 domainChain BHview chain
2 domainsChain BNview chain
1 domainChain BOview chain
1 domainChain BPview chain
1 domainChain BQview chain
1 domainChain BRview chain
1 domainChain BSview chain
1 domainChain BTview chain
1 domainChain BUview chain
1 domainChain BVview chain
1 domainChain BWview chain
1 domainChain BXview chain
1 domainChain BYview chain
1 domainChain BZview chain
2 domainsAll Domains (58)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | AB | e4v8oAB1 | AB:7-127,AB:157-241 | Ribosomal_S2 | 2007 → 2007.6 → 2007.6.1 |
| 2 | AC | e4v8oAC1 | AC:107-208 | Ribosomal_S3_C | 230 → 230.2 → 230.2.1 |
| 3 | AC | e4v8oAC2 | AC:2-106 | KH_2 | 327 → 327.11 → 327.11.1 |
| 4 | AD | e4v8oAD1 | AD:2-209 | Ribosomal_S4,S4 | 221 → 221.1 → 221.1.2 |
| 5 | AE | e4v8oAE1 | AE:5-73 | Ribosomal_S5 | 330 → 330.1 → 330.1.1 |
| 6 | AE | e4v8oAE2 | AE:74-155 | Ribosomal_S5_C | 212 → 212.1 → 212.1.1 |
| 7 | AF | e4v8oAF1 | AF:1-101 | Ribosomal_S6 | 304 → 304.12 → 304.12.1 |
| 8 | AG | e4v8oAG1 | AG:2-156 | Ribosomal_S7 | 167 → 167.1 → 167.1.1 |
| 9 | AH | e4v8oAH1 | AH:1-66 | Ribosomal_S8 | 320 → 320.2 → 320.2.1 |
| 10 | AH | e4v8oAH2 | AH:67-138 | Ribosomal_S8 | 4988 → 4988.1 → 4988.1.1 |
| 11 | AI | e4v8oAI1 | AI:2-128 | Ribosomal_S9 | 212 → 212.1 → 212.1.1 |
| 12 | AJ | e4v8oAJ1 | AJ:3-101 | Ribosomal_S10 | 304 → 304.44 → 304.44.1 |
| 13 | AK | e4v8oAK1 | AK:11-129 | Ribosomal_S11 | 2484 → 2484.1 → 2484.1.1 |
| 14 | AL | e4v8oAL1 | AL:5-129 | Ribosom_S12_S23 | 2 → 2.1 → 2.1.1 |
| 15 | AM | e4v8oAM1 | AM:2-126 | Ribosomal_S13 | 102 → 102.2 → 102.2.1 |
| 16 | AN | e4v8oAN1 | AN:2-61 | Ribosomal_S14 | 377 → 377.1 → 377.1.1 |
| 17 | AO | e4v8oAO1 | AO:2-89 | Ribosomal_S15 | 616 → 616.1 → 616.1.1 |
| 18 | AP | e4v8oAP1 | AP:1-84 | Ribosomal_S16 | 837 → 837.1 → 837.1.1 |
| 19 | AQ | e4v8oAQ1 | AQ:2-78 | Ribosomal_S17 | 2 → 2.1 → 2.1.1 |
| 20 | AR | e4v8oAR1 | AR:19-88 | Ribosomal_S18 | 101 → 101.1 → 101.1.1 |
| 21 | AS | e4v8oAS1 | AS:4-82 | Ribosomal_S19 | 838 → 838.1 → 838.1.1 |
| 22 | AT | e4v8oAT1 | AT:8-106 | Ribosomal_S20p | 604 → 604.9 → 604.9.1 |
| 23 | AY | e4v8oAY1 | AY:3-38,AY:62-280 | GTP_EFTU, MMR_HSR1 | 2004 → 2004.1 → 2004.1.1 |
| 24 | AY | e4v8oAY2 | AY:281-390 | EF-G_D2 | 1 → 1.1 → 1.1.7 |
| 25 | AY | e4v8oAY3 | AY:391-529 | RF3_C | 304 → 304.24 → 304.24.1 |
| 26 | B0 | e4v8oB01 | B0:2-85 | Ribosomal_L27 | 325 → 325.1 → 325.1.8 |
| 27 | B1 | e4v8oB11 | B1:3-96 | Ribosomal_L28 | 4232 → 4232.1 → 4232.1.1 |
| 28 | B2 | e4v8oB21 | B2:2-72 | Ribosomal_L29 | 192 → 192.4 → 192.4.1 |
| 29 | B3 | e4v8oB31 | B3:1-60 | Ribosomal_L30 | 887 → 887.1 → 887.1.1 |
| 30 | B4 | e4v8oB41 | B4:4-48 | Ribosomal_L31 | 4987 → 4987.1 → 4987.1.1 |
| 31 | B5 | e4v8oB51 | B5:2-60 | Ribosomal_L32p | 375 → 375.1 → 375.1.1 |
| 32 | B6 | e4v8oB61 | B6:5-54 | Ribosomal_L33 | 375 → 375.1 → 375.1.1 |
| 33 | B7 | e4v8oB71 | B7:1-49 | Ribosomal_L34 | 3074 → 3074.1 → 3074.1.1 |
| 34 | B8 | e4v8oB81 | B8:2-65 | Ribosomal_L35p | 4281 → 4281.1 → 4281.1.1 |
| 35 | B9 | e4v8oB91 | B9:1-37 | Ribosomal_L36 | 919 → 919.1 → 919.1.1 |
| 36 | BC | e4v8oBC1 | BC:67-158 | Ribosomal_L1 | 2007 → 2007.25 → 2007.25.1 |
| 37 | BC | e4v8oBC2 | BC:1-66,BC:159-228 | Ribosomal_L1 | 898 → 898.1 → 898.1.1 |
| 38 | BD | e4v8oBD1 | BD:127-276 | Ribosomal_L2_C | 4 → 4.1 → 4.1.1 |
| 39 | BD | e4v8oBD2 | BD:2-126 | Ribosomal_L2 | 2 → 2.1 → 2.1.1 |
| 40 | BE | e4v8oBE1 | BE:1-205 | Ribosomal_L3 | 1 → 1.1 → 1.1.7 |
| 41 | BF | e4v8oBF1 | BF:1-208 | Ribosomal_L4 | 7559 → 7559.1 → 7559.1.1 |
| 42 | BG | e4v8oBG1 | BG:2-182 | Ribosomal_L5,Ribosomal_L5_C | 882 → 882.1 → 882.1.1 |
| 43 | BH | e4v8oBH1 | BH:12-82 | Ribosomal_L6 | 318 → 318.1 → 318.1.1 |
| 44 | BH | e4v8oBH2 | BH:83-167 | Ribosomal_L6 | 318 → 318.1 → 318.1.1 |
| 45 | BN | e4v8oBN1 | BN:1-139 | Ribosomal_L13 | 2490 → 2490.2 → 2490.2.1 |
| 46 | BO | e4v8oBO1 | BO:1-122 | Ribosomal_L14 | 3174 → 3174.1 → 3174.1.1 |
| 47 | BP | e4v8oBP1 | BP:5-150 | Ribosomal_L27A, PF29471 | 2490 → 2490.3 → 2490.3.1 |
| 48 | BQ | e4v8oBQ1 | BQ:1-141 | Ribosomal_L16 | 325 → 325.1 → 325.1.5 |
| 49 | BR | e4v8oBR1 | BR:2-118 | Ribosomal_L17 | 218 → 218.3 → 218.3.1 |
| 50 | BS | e4v8oBS1 | BS:11-109 | Ribosomal_L18p | 2484 → 2484.1 → 2484.1.1 |
| 51 | BT | e4v8oBT1 | BT:1-117 | Ribosomal_L19 | 4 → 4.1 → 4.1.1 |
| 52 | BU | e4v8oBU1 | BU:2-118 | Ribosomal_L20 | 143 → 143.2 → 143.2.1 |
| 53 | BV | e4v8oBV1 | BV:1-101 | Ribosomal_L21p | 4186 → 4186.1 → 4186.1.1 |
| 54 | BW | e4v8oBW1 | BW:1-113 | Ribosomal_L22 | 218 → 218.2 → 218.2.1 |
| 55 | BX | e4v8oBX1 | BX:3-95 | Ribosomal_L23 | 304 → 304.109 → 304.109.1 |
| 56 | BY | e4v8oBY1 | BY:2-102 | KOW,ribosomal_L24 | 4 → 4.1 → 4.1.1 |
| 57 | BZ | e4v8oBZ1 | BZ:93-178 | Ribosomal_TL5_C | 240 → 240.1 → 240.1.1 |
| 58 | BZ | e4v8oBZ2 | BZ:3-92 | Ribosomal_L25p | 239 → 239.1 → 239.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors