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PDB 4V8S

X-RAY DIFFRACTION4.30 Å0 chains54 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

All Domains (54)

#ChainDomain IDRangeFamilyClassification
1AIe4v8sAI1AI:11-94RNA_pol_Rpb6152 → 152.1 → 152.1.1
2AJe4v8sAJ1AJ:33-81RNA_pol_Rpo134146 → 4146.1 → 4146.1.1
3AMe4v8sAM1AM:1-91RNA_pol_L_2305 → 305.1 → 305.1.1
4AOe4v8sAO1AO:1-65RNA_pol_N101 → 101.4 → 101.4.1
5ARe4v8sAR1AR:753-875RNA_pol_Rpb2_6325 → 325.1 → 325.1.7
6ARe4v8sAR2AR:171-344RNA_pol_Rpb2_24041 → 4041.1 → 4041.1.1
7ARe4v8sAR3AR:7-170,AR:345-475RNA_pol_Rpb2_1,RNA_pol_Rpb2_34010 → 4010.1 → 4010.1.1
8ARe4v8sAR4AR:476-575RNA_pol_Rpb2_44961 → 4961.1 → 4961.1.1
9ARe4v8sAR5AR:576-715RNA_pol_Rpb2_54042 → 4042.1 → 4042.1.1
10ARe4v8sAR6AR:999-1125RNA_pol_Rpb2_6,RNA_pol_Rpb2_74043 → 4043.1 → 4043.1.1
11ARe4v8sAR7AR:716-752,AR:876-998RNA_pol_Rpb2_61 → 1.1 → 1.1.2
12ASe4v8sAS1AS:2-36,AS:159-263RNA_pol_L305 → 305.1 → 305.1.1
13ASe4v8sAS2AS:37-158RNA_pol_A_bac240 → 240.2 → 240.2.1
14ATe4v8sAT1AT:1-78SHS2_Rpb7-N872 → 872.1 → 872.1.1
15ATe4v8sAT2AT:79-178S12 → 2.1 → 2.1.1
16AUe4v8sAU1AU:3-107RNA_pol_Rpb4102 → 102.1 → 102.1.1
17AVe4v8sAV1AV:5-117RNA_pol_RpbG2 → 2.1 → 2.1.1
18AWe4v8sAW1AW:3-306RNA_pol_Rpb1_14246 → 4246.1 → 4246.1.1
19AWe4v8sAW2AW:495-644RNA_pol_Rpb1_34959 → 4959.1 → 4959.1.1
20AWe4v8sAW3AW:645-879RNA_pol_Rpb1_5,RNA_pol_Rpb1_44958 → 4958.1 → 4958.1.1
21AWe4v8sAW4AW:307-494RNA_pol_Rpb1_21 → 1.1 → 1.1.2
22AXe4v8sAX1AX:5-48375.1.1.0375 → 375.1 → 375.1.1
23AYe4v8sAY1AY:116-147,AY:233-2754956.1.1.04956 → 4956.1 → 4956.1.1
24AYe4v8sAY2AY:148-2324955.1.1.04955 → 4955.1 → 4955.1.1
25AYe4v8sAY3AY:66-115,AY:276-394RNA_pol_Rpb1_54954 → 4954.1 → 4954.1.1
26AYe4v8sAY4AY:6-654957.1.1.04957 → 4957.1 → 4957.1.1
27AZe4v8sAZ1AZ:8-83RNA_pol_Rpb5_C840 → 840.1 → 840.1.1
28BAe4v8sBA1BA:3-306RNA_pol_Rpb1_14246 → 4246.1 → 4246.1.1
29BAe4v8sBA2BA:645-879RNA_pol_Rpb1_5,RNA_pol_Rpb1_44958 → 4958.1 → 4958.1.1
30BAe4v8sBA3BA:495-644RNA_pol_Rpb1_34959 → 4959.1 → 4959.1.1
31BAe4v8sBA4BA:307-494RNA_pol_Rpb1_21 → 1.1 → 1.1.2
32BBe4v8sBB1BB:999-1125RNA_pol_Rpb2_6,RNA_pol_Rpb2_74043 → 4043.1 → 4043.1.1
33BBe4v8sBB2BB:753-875RNA_pol_Rpb2_6325 → 325.1 → 325.1.7
34BBe4v8sBB3BB:7-170,BB:345-475RNA_pol_Rpb2_1,RNA_pol_Rpb2_34010 → 4010.1 → 4010.1.1
35BBe4v8sBB4BB:476-575RNA_pol_Rpb2_44961 → 4961.1 → 4961.1.1
36BBe4v8sBB5BB:576-715RNA_pol_Rpb2_54042 → 4042.1 → 4042.1.1
37BBe4v8sBB6BB:716-752,BB:876-998RNA_pol_Rpb2_61 → 1.1 → 1.1.2
38BBe4v8sBB7BB:171-344RNA_pol_Rpb2_24041 → 4041.1 → 4041.1.1
39BCe4v8sBC1BC:116-147,BC:233-2754956.1.1.04956 → 4956.1 → 4956.1.1
40BCe4v8sBC2BC:148-2324955.1.1.04955 → 4955.1 → 4955.1.1
41BCe4v8sBC3BC:6-654957.1.1.04957 → 4957.1 → 4957.1.1
42BCe4v8sBC4BC:66-115,BC:276-394RNA_pol_Rpb1_54954 → 4954.1 → 4954.1.1
43BDe4v8sBD1BD:37-158RNA_pol_A_bac240 → 240.2 → 240.2.1
44BDe4v8sBD2BD:2-36,BD:159-263RNA_pol_L305 → 305.1 → 305.1.1
45BEe4v8sBE1BE:1-78SHS2_Rpb7-N872 → 872.1 → 872.1.1
46BEe4v8sBE2BE:79-178S12 → 2.1 → 2.1.1
47BFe4v8sBF1BF:3-107RNA_pol_Rpb4102 → 102.1 → 102.1.1
48BGe4v8sBG1BG:5-117RNA_pol_RpbG2 → 2.1 → 2.1.1
49BHe4v8sBH1BH:8-83RNA_pol_Rpb5_C840 → 840.1 → 840.1.1
50BKe4v8sBK1BK:11-94RNA_pol_Rpb6152 → 152.1 → 152.1.1
51BLe4v8sBL1BL:1-91RNA_pol_L_2305 → 305.1 → 305.1.1
52BNe4v8sBN1BN:1-65RNA_pol_N101 → 101.4 → 101.4.1
53BPe4v8sBP1BP:5-48375.1.1.0375 → 375.1 → 375.1.1
54BQe4v8sBQ1BQ:32-81RNA_pol_Rpo134146 → 4146.1 → 4146.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors