PDB 4XLR
X-RAY DIFFRACTION4.15 Å0 chains56 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Aview chain
2 domainsChain Bview chain
2 domainsChain Cview chain
7 domainsChain Dview chain
12 domainsChain Eview chain
1 domainChain Fview chain
3 domainsChain Gview chain
2 domainsChain Hview chain
2 domainsChain Iview chain
7 domainsChain Jview chain
10 domainsChain Kview chain
1 domainChain Lview chain
3 domainsChain Mview chain
2 domainsChain Nview chain
2 domainsAll Domains (56)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e4xlrA1 | A:7-49,A:173-233 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 2 | A | e4xlrA2 | A:50-172 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 3 | B | e4xlrB1 | B:7-49,B:173-233 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 4 | B | e4xlrB2 | B:50-172 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 5 | C | e4xlrC1 | C:2-141,C:331-457 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 6 | C | e4xlrC2 | C:699-832 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 7 | C | e4xlrC3 | C:458-591 | RNA_pol_Rpb2_45 | 4042 → 4042.1 → 4042.1.1 |
| 8 | C | e4xlrC4 | C:142-330 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 9 | C | e4xlrC5 | C:663-700,C:827-999 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 10 | C | e4xlrC6 | C:999-1118 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 11 | C | e4xlrC7 | C:592-662 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 12 | D | e4xlrD1 | D:217-340 | RPOC_hybrid | 325 → 325.1 → 325.1.6 |
| 13 | D | e4xlrD2 | D:396-447 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 14 | D | e4xlrD3 | D:622-653,D:697-777 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 15 | D | e4xlrD4 | D:654-696 | 4951.1.1.0 | 4951 → 4951.1 → 4951.1.1 |
| 16 | D | e4xlrD5 | D:166-208,D:389-395 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 17 | D | e4xlrD6 | D:209-216,D:341-388 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 18 | D | e4xlrD7 | D:778-948 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 19 | D | e4xlrD8 | D:1110-1200 | 275.1.1.0 | 275 → 275.1 → 275.1.1 |
| 20 | D | e4xlrD9 | D:949-1109 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 21 | D | e4xlrD10 | D:2-165,D:448-621 | RNA_pol_Rpb1_1 | 4246 → 4246.1 → 4246.1.1 |
| 22 | D | e4xlrD11 | D:1270-1330 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 23 | D | e4xlrD12 | D:1201-1269,D:1331-1505 | RNA_pol_Rpb1_5 | 4954 → 4954.1 → 4954.1.1 |
| 24 | E | e4xlrE1 | E:2-94 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.2 |
| 25 | F | e4xlrF1 | F:273-332 | Sigma70_r3 | 101 → 101.1 → 101.1.1 |
| 26 | F | e4xlrF2 | F:94-272 | Sigma70_r1_2,Sigma70_r2 | 142 → 142.1 → 142.1.1 |
| 27 | F | e4xlrF3 | F:333-438 | Sigma70_r4 | 101 → 101.1 → 101.1.1 |
| 28 | G | e4xlrG1 | G:50-172 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 29 | G | e4xlrG2 | G:7-49,G:173-233 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 30 | H | e4xlrH1 | H:7-49,H:173-233 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 31 | H | e4xlrH2 | H:50-172 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 32 | I | e4xlrI1 | I:663-700,I:827-999 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 33 | I | e4xlrI2 | I:457-591 | RNA_pol_Rpb2_45 | 4042 → 4042.1 → 4042.1.1 |
| 34 | I | e4xlrI3 | I:999-1118 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 35 | I | e4xlrI4 | I:2-141,I:331-456 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 36 | I | e4xlrI5 | I:699-832 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 37 | I | e4xlrI6 | I:592-662 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 38 | I | e4xlrI7 | I:142-330 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 39 | J | e4xlrJ1 | J:949-1109 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 40 | J | e4xlrJ2 | J:1201-1269,J:1331-1505 | RNA_pol_Rpb1_5 | 4954 → 4954.1 → 4954.1.1 |
| 41 | J | e4xlrJ3 | J:654-696 | 4951.1.1.0 | 4951 → 4951.1 → 4951.1.1 |
| 42 | J | e4xlrJ4 | J:166-216,J:364-394 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 43 | J | e4xlrJ5 | J:1110-1200 | 275.1.1.0 | 275 → 275.1 → 275.1.1 |
| 44 | J | e4xlrJ6 | J:395-448 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 45 | J | e4xlrJ7 | J:2-165,J:449-610 | RNA_pol_Rpb1_1 | 4246 → 4246.1 → 4246.1.1 |
| 46 | J | e4xlrJ8 | J:778-948 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 47 | J | e4xlrJ9 | J:1270-1330 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 48 | J | e4xlrJ10 | J:611-653,J:697-777 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 49 | K | e4xlrK1 | K:2-94 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.2 |
| 50 | L | e4xlrL1 | L:94-272 | Sigma70_r1_2,Sigma70_r2 | 142 → 142.1 → 142.1.1 |
| 51 | L | e4xlrL2 | L:273-332 | Sigma70_r3 | 101 → 101.1 → 101.1.1 |
| 52 | L | e4xlrL3 | L:333-438 | Sigma70_r4 | 101 → 101.1 → 101.1.1 |
| 53 | M | e4xlrM1 | M:3-63 | CarD_TRCF_RID | 4 → 4.1 → 4.1.1 |
| 54 | M | e4xlrM2 | M:64-160 | CarD_C | 101 → 101.1 → 101.1.1 |
| 55 | N | e4xlrN1 | N:64-160 | CarD_C | 101 → 101.1 → 101.1.1 |
| 56 | N | e4xlrN2 | N:3-63 | CarD_TRCF_RID | 4 → 4.1 → 4.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors