PDB 4YDJ
X-RAY DIFFRACTION2.30 Å0 chains12 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Aview chain
2 domainsChain Bview chain
2 domainsChain Hview chain
2 domainsChain Lview chain
2 domainsAll Domains (12)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e4ydjA2 | A:1-113 | V-set | 11 → 11.1 → 11.1.1 |
| 2 | A | e4ydjA3 | A:114-216 | C1-set | 11 → 11.1 → 11.1.1 |
| 3 | B | e4ydjB1 | B:108-211 | C1-set | 11 → 11.1 → 11.1.1 |
| 4 | B | e4ydjB2 | B:1-107 | V-set | 11 → 11.1 → 11.1.1 |
| 5 | G | e4ydjG1 | G:44-113,G:210-255,G:474-491 | GP120 | 1061 → 1061.1 → 1061.1.1 |
| 6 | G | e4ydjG2 | G:256-317,G:324-473 | GP120 | 259 → 259.1 → 259.1.1 |
| 7 | H | e4ydjH1 | H:1-113 | V-set | 11 → 11.1 → 11.1.1 |
| 8 | H | e4ydjH2 | H:114-216 | C1-set | 11 → 11.1 → 11.1.1 |
| 9 | I | e4ydjI1 | I:256-317,I:324-473 | GP120 | 259 → 259.1 → 259.1.1 |
| 10 | I | e4ydjI2 | I:44-113,I:210-255,I:474-492 | GP120 | 1061 → 1061.1 → 1061.1.1 |
| 11 | L | e4ydjL1 | L:108-211 | C1-set | 11 → 11.1 → 11.1.1 |
| 12 | L | e4ydjL2 | L:1-107 | V-set | 11 → 11.1 → 11.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors