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PDB 4YFN

X-RAY DIFFRACTION3.80 Å0 chains52 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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All Domains (52)

#ChainDomain IDRangeFamilyClassification
1Ae4yfnA1A:53-178RNA_pol_A_bac240 → 240.2 → 240.2.1
2Ae4yfnA2A:1-52,A:179-235RNA_pol_L305 → 305.1 → 305.1.1
3Be4yfnB1B:53-178RNA_pol_A_bac240 → 240.2 → 240.2.1
4Be4yfnB2B:234-317RNA_pol_A_CTD102 → 102.1 → 102.1.1
5Be4yfnB3B:6-52,B:179-233RNA_pol_L305 → 305.1 → 305.1.1
6Ce4yfnC1C:226-234,C:289-342275.1.1.0275 → 275.1 → 275.1.1
7Ce4yfnC2C:152-225,C:343-451RNA_pol_Rpb2_24041 → 4041.1 → 4041.1.1
8Ce4yfnC3C:791-827,C:1063-1239RNA_pol_Rpb2_61 → 1.1 → 1.1.2
9Ce4yfnC4C:235-288275.1.1.0275 → 275.1 → 275.1.1
10Ce4yfnC5C:939-10443681.1.1.03681 → 3681.1 → 3681.1.1
11Ce4yfnC6C:3-151,C:452-577RNA_pol_Rpb2_1,RNA_pol_Rpb2_34010 → 4010.1 → 4010.1.1
12Ce4yfnC7C:1240-1342RNA_pol_Rpb2_6,RNA_pol_Rpb2_74043 → 4043.1 → 4043.1.1
13Ce4yfnC8C:578-712RNA_pol_Rpb2_454042 → 4042.1 → 4042.1.1
14Ce4yfnC9C:713-790RNA_pol_Rpb2_6325 → 325.1 → 325.1.7
15Ce4yfnC10C:828-938,C:1045-1062RNA_pol_Rpb2_6325 → 325.1 → 325.1.7
16De4yfnD1D:895-931,D:1135-1151,D:1216-1376RNA_pol_Rpb1_54954 → 4954.1 → 4954.1.1
17De4yfnD2D:639-810RNA_pol_Rpb1_5,RNA_pol_Rpb1_44958 → 4958.1 → 4958.1.1
18De4yfnD3D:8-333RNA_pol_Rpb1_14246 → 4246.1 → 4246.1.1
19De4yfnD4D:811-894275.1.1.0275 → 275.1 → 275.1.1
20De4yfnD5D:334-377,D:418-498RNA_pol_Rpb1_21 → 1.1 → 1.1.2
21De4yfnD6D:378-4174951.1.1.04951 → 4951.1 → 4951.1.1
22De4yfnD7D:1152-1215325.1.7.0325 → 325.1 → 325.1.7
23De4yfnD8D:499-638RNA_pol_Rpb1_34959 → 4959.1 → 4959.1.1
24Ee4yfnE1E:2-90RNA_pol_Rpb6152 → 152.1 → 152.1.2
25Fe4yfnF1F:94-167,F:213-447Sigma70_r1_2,Sigma70_r2,Sigma70_ner142 → 142.1 → 142.1.1
26Fe4yfnF2F:502-612Sigma70_r3,Sigma70_r4101 → 101.1 → 101.1.1
27Fe4yfnF3F:448-501Sigma70_r3101 → 101.1 → 101.1.1
28Ge4yfnG1G:53-178RNA_pol_A_bac240 → 240.2 → 240.2.1
29Ge4yfnG2G:7-52,G:179-233RNA_pol_L305 → 305.1 → 305.1.1
30He4yfnH1H:53-178RNA_pol_A_bac240 → 240.2 → 240.2.1
31He4yfnH2H:6-52,H:179-233RNA_pol_L305 → 305.1 → 305.1.1
32Ie4yfnI1I:235-288275.1.1.0275 → 275.1 → 275.1.1
33Ie4yfnI2I:791-827,I:1063-1239RNA_pol_Rpb2_61 → 1.1 → 1.1.2
34Ie4yfnI3I:939-10443681.1.1.03681 → 3681.1 → 3681.1.1
35Ie4yfnI4I:3-151,I:452-577RNA_pol_Rpb2_1,RNA_pol_Rpb2_34010 → 4010.1 → 4010.1.1
36Ie4yfnI5I:226-234,I:289-342275.1.1.0275 → 275.1 → 275.1.1
37Ie4yfnI6I:713-790RNA_pol_Rpb2_6325 → 325.1 → 325.1.7
38Ie4yfnI7I:828-938,I:1045-1062RNA_pol_Rpb2_6325 → 325.1 → 325.1.7
39Ie4yfnI8I:1240-1342RNA_pol_Rpb2_6,RNA_pol_Rpb2_74043 → 4043.1 → 4043.1.1
40Ie4yfnI9I:152-225,I:343-451RNA_pol_Rpb2_24041 → 4041.1 → 4041.1.1
41Ie4yfnI10I:578-712RNA_pol_Rpb2_454042 → 4042.1 → 4042.1.1
42Je4yfnJ1J:1137-1215325.1.7.0325 → 325.1 → 325.1.7
43Je4yfnJ2J:16-3414246.1.1.04246 → 4246.1 → 4246.1.1
44Je4yfnJ3J:1214-1375RNA_pol_Rpb1_54954 → 4954.1 → 4954.1.1
45Je4yfnJ4J:812-931RNA_pol_Rpb1_5275 → 275.1 → 275.1.1
46Je4yfnJ5J:499-638RNA_pol_Rpb1_34959 → 4959.1 → 4959.1.1
47Je4yfnJ6J:639-811RNA_pol_Rpb1_5,RNA_pol_Rpb1_44958 → 4958.1 → 4958.1.1
48Je4yfnJ7J:334-498RNA_pol_Rpb1_21 → 1.1 → 1.1.2
49Ke4yfnK1K:2-80RNA_pol_Rpb6152 → 152.1 → 152.1.2
50Le4yfnL1L:94-167,L:213-447Sigma70_r1_2,Sigma70_r2,Sigma70_ner142 → 142.1 → 142.1.1
51Le4yfnL2L:502-613Sigma70_r3,Sigma70_r4101 → 101.1 → 101.1.1
52Le4yfnL3L:448-501Sigma70_r3101 → 101.1 → 101.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors