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PDB 4YLO

X-RAY DIFFRACTION6.00 Å0 chains81 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

All Domains (81)

#ChainDomain IDRangeFamilyClassification
1Ae4yloA1A:53-178RNA_pol_A_bac240 → 240.2 → 240.2.1
2Ae4yloA2A:6-52,A:179-235RNA_pol_L305 → 305.1 → 305.1.1
3Be4yloB2B:6-52,B:168-222RNA_pol_L305 → 305.1 → 305.1.1
4Be4yloB3B:53-167RNA_pol_A_bac240 → 240.2 → 240.2.1
5Ce4yloC1C:2-151,C:452-577RNA_pol_Rpb2_1,RNA_pol_Rpb2_34010 → 4010.1 → 4010.1.1
6Ce4yloC2C:152-225,C:343-451RNA_pol_Rpb2_24041 → 4041.1 → 4041.1.1
7Ce4yloC3C:1240-1342RNA_pol_Rpb2_6,RNA_pol_Rpb2_74043 → 4043.1 → 4043.1.1
8Ce4yloC4C:226-234,C:289-342275.1.1.0275 → 275.1 → 275.1.1
9Ce4yloC5C:713-790RNA_pol_Rpb2_6325 → 325.1 → 325.1.7
10Ce4yloC6C:578-712RNA_pol_Rpb2_454042 → 4042.1 → 4042.1.1
11Ce4yloC7C:939-10443681.1.1.03681 → 3681.1 → 3681.1.1
12Ce4yloC8C:791-827,C:1063-1239RNA_pol_Rpb2_61 → 1.1 → 1.1.2
13Ce4yloC9C:828-938,C:1045-1062RNA_pol_Rpb2_6325 → 325.1 → 325.1.7
14Ce4yloC10C:235-288275.1.1.0275 → 275.1 → 275.1.1
15De4yloD1D:932-1022325.1.7.0325 → 325.1 → 325.1.7
16De4yloD2D:895-931,D:1214-1376RNA_pol_Rpb1_54954 → 4954.1 → 4954.1.1
17De4yloD3D:639-810RNA_pol_Rpb1_5,RNA_pol_Rpb1_44958 → 4958.1 → 4958.1.1
18De4yloD4D:811-894275.1.1.0275 → 275.1 → 275.1.1
19De4yloD5D:1132-1215325.1.7.0325 → 325.1 → 325.1.7
20De4yloD6D:499-638RNA_pol_Rpb1_34959 → 4959.1 → 4959.1.1
21De4yloD7D:1023-1131325.1.7.0325 → 325.1 → 325.1.7
22De4yloD8D:334-498RNA_pol_Rpb1_21 → 1.1 → 1.1.2
23De4yloD9D:15-3414246.1.1.04246 → 4246.1 → 4246.1.1
24Ee4yloE1E:2-91RNA_pol_Rpb6152 → 152.1 → 152.1.2
25Fe4yloF3F:485-613Sigma70_r3,Sigma70_r4101 → 101.1 → 101.1.1
26Fe4yloF1F:79-171,F:210-447Sigma70_r1_2,Sigma70_r2,Sigma70_ner142 → 142.1 → 142.1.1
27Fe4yloF4F:448-479Sigma70_r3101 → 101.1 → 101.1.1
28Ge4yloG1G:6-52,G:179-235RNA_pol_L305 → 305.1 → 305.1.1
29Ge4yloG2G:53-178RNA_pol_A_bac240 → 240.2 → 240.2.1
30He4yloH2H:53-167RNA_pol_A_bac240 → 240.2 → 240.2.1
31He4yloH3H:6-52,H:168-222RNA_pol_L305 → 305.1 → 305.1.1
32Ie4yloI1I:2-151,I:452-577RNA_pol_Rpb2_1,RNA_pol_Rpb2_34010 → 4010.1 → 4010.1.1
33Ie4yloI2I:791-827,I:1063-1239RNA_pol_Rpb2_61 → 1.1 → 1.1.2
34Ie4yloI3I:578-712RNA_pol_Rpb2_454042 → 4042.1 → 4042.1.1
35Ie4yloI4I:828-938,I:1045-1062RNA_pol_Rpb2_6325 → 325.1 → 325.1.7
36Ie4yloI5I:152-225,I:343-451RNA_pol_Rpb2_24041 → 4041.1 → 4041.1.1
37Ie4yloI6I:235-288275.1.1.0275 → 275.1 → 275.1.1
38Ie4yloI7I:1240-1342RNA_pol_Rpb2_6,RNA_pol_Rpb2_74043 → 4043.1 → 4043.1.1
39Ie4yloI8I:226-234,I:289-342275.1.1.0275 → 275.1 → 275.1.1
40Ie4yloI9I:939-10443681.1.1.03681 → 3681.1 → 3681.1.1
41Ie4yloI10I:713-790RNA_pol_Rpb2_6325 → 325.1 → 325.1.7
42Je4yloJ1J:895-931,J:1214-1376RNA_pol_Rpb1_54954 → 4954.1 → 4954.1.1
43Je4yloJ2J:15-3414246.1.1.04246 → 4246.1 → 4246.1.1
44Je4yloJ3J:499-638RNA_pol_Rpb1_34959 → 4959.1 → 4959.1.1
45Je4yloJ4J:1023-1132325.1.7.0325 → 325.1 → 325.1.7
46Je4yloJ5J:811-894275.1.1.0275 → 275.1 → 275.1.1
47Je4yloJ6J:334-498RNA_pol_Rpb1_21 → 1.1 → 1.1.2
48Je4yloJ7J:639-810RNA_pol_Rpb1_5,RNA_pol_Rpb1_44958 → 4958.1 → 4958.1.1
49Je4yloJ8J:1133-1215325.1.7.0325 → 325.1 → 325.1.7
50Je4yloJ9J:932-1022325.1.7.0325 → 325.1 → 325.1.7
51Ke4yloK1K:2-91RNA_pol_Rpb6152 → 152.1 → 152.1.2
52Le4yloL1L:447-479Sigma70_r3101 → 101.1 → 101.1.1
53Le4yloL2L:480-613Sigma70_r3,Sigma70_r4101 → 101.1 → 101.1.1
54Le4yloL3L:79-171,L:210-446Sigma70_r1_2,Sigma70_r2,Sigma70_ner142 → 142.1 → 142.1.1
55Me4yloM1M:6-52,M:179-235RNA_pol_L305 → 305.1 → 305.1.1
56Me4yloM2M:53-178RNA_pol_A_bac240 → 240.2 → 240.2.1
57Ne4yloN1N:6-52,N:168-222RNA_pol_L305 → 305.1 → 305.1.1
58Ne4yloN2N:53-167RNA_pol_A_bac240 → 240.2 → 240.2.1
59Oe4yloO1O:828-938,O:1045-1062RNA_pol_Rpb2_6325 → 325.1 → 325.1.7
60Oe4yloO2O:939-10443681.1.1.03681 → 3681.1 → 3681.1.1
61Oe4yloO3O:578-712RNA_pol_Rpb2_454042 → 4042.1 → 4042.1.1
62Oe4yloO4O:2-151,O:452-577RNA_pol_Rpb2_1,RNA_pol_Rpb2_34010 → 4010.1 → 4010.1.1
63Oe4yloO5O:713-790RNA_pol_Rpb2_6325 → 325.1 → 325.1.7
64Oe4yloO6O:791-827,O:1063-1239RNA_pol_Rpb2_61 → 1.1 → 1.1.2
65Oe4yloO7O:152-225,O:343-451RNA_pol_Rpb2_24041 → 4041.1 → 4041.1.1
66Oe4yloO8O:226-234,O:289-342275.1.1.0275 → 275.1 → 275.1.1
67Oe4yloO9O:235-288275.1.1.0275 → 275.1 → 275.1.1
68Oe4yloO10O:1240-1342RNA_pol_Rpb2_6,RNA_pol_Rpb2_74043 → 4043.1 → 4043.1.1
69Pe4yloP1P:811-894275.1.1.0275 → 275.1 → 275.1.1
70Pe4yloP2P:15-3414246.1.1.04246 → 4246.1 → 4246.1.1
71Pe4yloP3P:1023-1132325.1.7.0325 → 325.1 → 325.1.7
72Pe4yloP4P:639-810RNA_pol_Rpb1_5,RNA_pol_Rpb1_44958 → 4958.1 → 4958.1.1
73Pe4yloP5P:932-1022325.1.7.0325 → 325.1 → 325.1.7
74Pe4yloP6P:895-931,P:1214-1376RNA_pol_Rpb1_54954 → 4954.1 → 4954.1.1
75Pe4yloP7P:499-638RNA_pol_Rpb1_34959 → 4959.1 → 4959.1.1
76Pe4yloP8P:1133-1215325.1.7.0325 → 325.1 → 325.1.7
77Pe4yloP9P:334-498RNA_pol_Rpb1_21 → 1.1 → 1.1.2
78Qe4yloQ1Q:2-91RNA_pol_Rpb6152 → 152.1 → 152.1.2
79Re4yloR1R:79-171,R:210-447Sigma70_r1_2,Sigma70_r2,Sigma70_ner142 → 142.1 → 142.1.1
80Re4yloR2R:448-479Sigma70_r3101 → 101.1 → 101.1.1
81Re4yloR3R:480-613Sigma70_r3,Sigma70_r4101 → 101.1 → 101.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors