ECODEvolutionary Classification of Protein Domains

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PDB 5AFQ

X-RAY DIFFRACTION7.00 Å0 chains10 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain Aview chain

5 domains

e5afqA1(A:231-336)e5afqA2(A:1-84)e5afqA3(A:337-403,A:426-429)e5afqA4(A:85-163)e5afqA5(A:427-532)

Chain Bview chain

5 domains

e5afqB1(B:231-336)e5afqB2(B:85-163)e5afqB3(B:1-84)e5afqB4(B:337-404,B:426-429)e5afqB5(B:427-532)

All Domains (10)

#	Chain	Domain ID	Range	Family	Classification
1	A	e5afqA1	A:231-336	RNA_pol_Rpc82	101 → 101.1 → 101.1.2
2	A	e5afqA2	A:1-84	HTH_9	101 → 101.1 → 101.1.2
3	A	e5afqA3	A:337-403,A:426-429	POLR3C_WHD	101 → 101.1 → 101.1.2
4	A	e5afqA4	A:85-163	101.1.2.0	101 → 101.1 → 101.1.2
5	A	e5afqA5	A:427-532	RPC3_helical	192 → 192.24 → 192.24.1
6	B	e5afqB1	B:231-336	RNA_pol_Rpc82	101 → 101.1 → 101.1.2
7	B	e5afqB2	B:85-163	101.1.2.0	101 → 101.1 → 101.1.2
8	B	e5afqB3	B:1-84	HTH_9	101 → 101.1 → 101.1.2
9	B	e5afqB4	B:337-404,B:426-429	POLR3C_WHD	101 → 101.1 → 101.1.2
10	B	e5afqB5	B:427-532	RPC3_helical	192 → 192.24 → 192.24.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors