PDB 5C0W
X-RAY DIFFRACTION4.60 Å0 chains29 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Aview chain
2 domainsChain Bview chain
2 domainsChain Cview chain
2 domainsChain Dview chain
2 domainsChain Eview chain
2 domainsChain Fview chain
2 domainsChain Gview chain
3 domainsChain Iview chain
2 domainsChain Jview chain
5 domainsChain Kview chain
3 domainsChain Lview chain
1 domainAll Domains (29)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e5c0wA1 | A:187-300 | RNase_PH_C | 245 → 245.1 → 245.1.1 |
| 2 | A | e5c0wA2 | A:3-186 | RNase_PH | 212 → 212.1 → 212.1.1 |
| 3 | B | e5c0wB1 | B:1-152 | RNase_PH | 212 → 212.1 → 212.1.1 |
| 4 | B | e5c0wB2 | B:153-244 | RNase_PH_C | 245 → 245.1 → 245.1.1 |
| 5 | C | e5c0wC1 | C:287-394 | 245.1.1.0 | 245 → 245.1 → 245.1.1 |
| 6 | C | e5c0wC2 | C:7-99,C:126-249,C:270-286 | RNase_PH | 212 → 212.1 → 212.1.1 |
| 7 | D | e5c0wD1 | D:1-125 | RNase_PH | 212 → 212.1 → 212.1.1 |
| 8 | D | e5c0wD2 | D:126-222 | RNase_PH_C | 245 → 245.1 → 245.1.1 |
| 9 | E | e5c0wE1 | E:181-265 | 245.1.1.0 | 245 → 245.1 → 245.1.1 |
| 10 | E | e5c0wE2 | E:0-180 | 212.1.1.0 | 212 → 212.1 → 212.1.1 |
| 11 | F | e5c0wF1 | F:5-20,F:43-185 | RNase_PH | 212 → 212.1 → 212.1.1 |
| 12 | F | e5c0wF2 | F:183-250 | 245.1.1.0 | 245 → 245.1 → 245.1.1 |
| 13 | G | e5c0wG1 | G:152-238 | KH_6 | 327 → 327.11 → 327.11.2 |
| 14 | G | e5c0wG2 | G:62-151 | RRP40_S1 | 2 → 2.1 → 2.1.1 |
| 15 | G | e5c0wG3 | G:3-63 | Rrp40_N | 325 → 325.1 → 325.1.8 |
| 16 | H | e5c0wH1 | H:196-245,H:276-356 | KH_6 | 327 → 327.11 → 327.11.2 |
| 17 | H | e5c0wH2 | H:102-196 | RRP4_S1 | 2 → 2.1 → 2.1.1 |
| 18 | H | e5c0wH3 | H:2-17,H:52-101 | ECR1_N | 325 → 325.1 → 325.1.8 |
| 19 | I | e5c0wI1 | I:5-68,I:106-115 | CSL4_N | 325 → 325.1 → 325.1.8 |
| 20 | I | e5c0wI2 | I:126-162,I:186-291 | EXOSC1 | 2 → 2.1 → 2.1.1 |
| 21 | J | e5c0wJ1 | J:36-236 | PIN_4 | 2006 → 2006.1 → 2006.1.4 |
| 22 | J | e5c0wJ2 | J:237-399 | Rrp44_CSD1 | 2 → 2.1 → 2.1.1 |
| 23 | J | e5c0wJ3 | J:495-910 | RNB | 2 → 2.9 → 2.9.1 |
| 24 | J | e5c0wJ4 | J:911-1001 | Rrp44_S1 | 2 → 2.1 → 2.1.1 |
| 25 | J | e5c0wJ5 | J:400-494 | OB_Dis3 | 2 → 2.1 → 2.1.1 |
| 26 | K | e5c0wK1 | K:126-420 | DNA_pol_A_exo1 | 2484 → 2484.1 → 2484.1.1 |
| 27 | K | e5c0wK2 | K:5-106 | PMC2NT | 3910 → 3910.1 → 3910.1.1 |
| 28 | K | e5c0wK3 | K:421-516 | HRDC | 102 → 102.1 → 102.1.1 |
| 29 | L | e5c0wL1 | L:5-117 | Sas10_Utp3 | 3911 → 3911.1 → 3911.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors