PDB 5C0X
X-RAY DIFFRACTION3.81 Å0 chains26 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Aview chain
2 domainsChain Bview chain
2 domainsChain Cview chain
2 domainsChain Dview chain
2 domainsChain Eview chain
2 domainsChain Fview chain
2 domainsChain Gview chain
3 domainsChain Iview chain
2 domainsChain Jview chain
5 domainsChain Kview chain
1 domainAll Domains (26)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e5c0xA1 | A:3-186 | RNase_PH | 212 → 212.1 → 212.1.1 |
| 2 | A | e5c0xA2 | A:187-301 | RNase_PH_C | 245 → 245.1 → 245.1.1 |
| 3 | B | e5c0xB1 | B:1-152 | RNase_PH | 212 → 212.1 → 212.1.1 |
| 4 | B | e5c0xB2 | B:153-244 | RNase_PH_C | 245 → 245.1 → 245.1.1 |
| 5 | C | e5c0xC1 | C:8-99,C:121-249,C:270-286 | RNase_PH | 212 → 212.1 → 212.1.1 |
| 6 | C | e5c0xC2 | C:287-394 | 245.1.1.0 | 245 → 245.1 → 245.1.1 |
| 7 | D | e5c0xD1 | D:126-223 | RNase_PH_C | 245 → 245.1 → 245.1.1 |
| 8 | D | e5c0xD2 | D:1-125 | RNase_PH | 212 → 212.1 → 212.1.1 |
| 9 | E | e5c0xE1 | E:181-265 | 245.1.1.0 | 245 → 245.1 → 245.1.1 |
| 10 | E | e5c0xE2 | E:-1-180 | 212.1.1.0 | 212 → 212.1 → 212.1.1 |
| 11 | F | e5c0xF1 | F:183-248 | 245.1.1.0 | 245 → 245.1 → 245.1.1 |
| 12 | F | e5c0xF2 | F:4-22,F:42-185 | RNase_PH | 212 → 212.1 → 212.1.1 |
| 13 | G | e5c0xG1 | G:152-237 | KH_6 | 327 → 327.11 → 327.11.2 |
| 14 | G | e5c0xG2 | G:1-63 | Rrp40_N | 325 → 325.1 → 325.1.8 |
| 15 | G | e5c0xG3 | G:62-151 | RRP40_S1 | 2 → 2.1 → 2.1.1 |
| 16 | H | e5c0xH1 | H:196-245,H:276-356 | KH_6 | 327 → 327.11 → 327.11.2 |
| 17 | H | e5c0xH2 | H:2-17,H:50-101 | ECR1_N | 325 → 325.1 → 325.1.8 |
| 18 | H | e5c0xH3 | H:102-196 | RRP4_S1 | 2 → 2.1 → 2.1.1 |
| 19 | I | e5c0xI1 | I:126-162,I:186-291 | EXOSC1 | 2 → 2.1 → 2.1.1 |
| 20 | I | e5c0xI2 | I:8-68,I:106-115 | CSL4_N | 325 → 325.1 → 325.1.8 |
| 21 | J | e5c0xJ1 | J:911-1001 | Rrp44_S1 | 2 → 2.1 → 2.1.1 |
| 22 | J | e5c0xJ2 | J:9-236 | PIN_4 | 2006 → 2006.1 → 2006.1.4 |
| 23 | J | e5c0xJ3 | J:495-910 | RNB | 2 → 2.9 → 2.9.1 |
| 24 | J | e5c0xJ4 | J:400-494 | OB_Dis3 | 2 → 2.1 → 2.1.1 |
| 25 | J | e5c0xJ5 | J:237-328,J:364-399 | Rrp44_CSD1 | 2 → 2.1 → 2.1.1 |
| 26 | K | e5c0xK1 | K:148-417,K:533-535 | DNA_pol_A_exo1 | 2484 → 2484.1 → 2484.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors