PDB 5CDO
X-RAY DIFFRACTION3.15 Å0 chains16 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Aview chain
3 domainsChain Bview chain
1 domainChain Cview chain
3 domainsChain Dview chain
1 domainChain Rview chain
3 domainsChain Sview chain
1 domainChain Tview chain
3 domainsChain Uview chain
1 domainAll Domains (16)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e5cdoA1 | A:31-161 | DNA_topoisoIV | 101 → 101.1 → 101.1.2 |
| 2 | A | e5cdoA2 | A:346-490 | DNA_topoisoIV | 4016 → 4016.1 → 4016.1.1 |
| 3 | A | e5cdoA3 | A:162-345 | DNA_topoisoIV | 4014 → 4014.1 → 4014.1.1 |
| 4 | B | e5cdoB1 | B:417-638 | DNA_gyraseB_C,Toprim | 2006 → 2006.1 → 2006.1.3 |
| 5 | C | e5cdoC1 | C:162-345 | DNA_topoisoIV | 4014 → 4014.1 → 4014.1.1 |
| 6 | C | e5cdoC2 | C:11-161 | DNA_topoisoIV | 101 → 101.1 → 101.1.2 |
| 7 | C | e5cdoC3 | C:346-490 | DNA_topoisoIV | 4016 → 4016.1 → 4016.1.1 |
| 8 | D | e5cdoD1 | D:417-638 | DNA_gyraseB_C,Toprim | 2006 → 2006.1 → 2006.1.3 |
| 9 | R | e5cdoR1 | R:162-345 | DNA_topoisoIV | 4014 → 4014.1 → 4014.1.1 |
| 10 | R | e5cdoR2 | R:31-161 | DNA_topoisoIV | 101 → 101.1 → 101.1.2 |
| 11 | R | e5cdoR3 | R:346-490 | DNA_topoisoIV | 4016 → 4016.1 → 4016.1.1 |
| 12 | S | e5cdoS1 | S:417-638 | DNA_gyraseB_C,Toprim | 2006 → 2006.1 → 2006.1.3 |
| 13 | T | e5cdoT1 | T:162-345 | DNA_topoisoIV | 4014 → 4014.1 → 4014.1.1 |
| 14 | T | e5cdoT2 | T:31-161 | DNA_topoisoIV | 101 → 101.1 → 101.1.2 |
| 15 | T | e5cdoT3 | T:346-490 | DNA_topoisoIV | 4016 → 4016.1 → 4016.1.1 |
| 16 | U | e5cdoU1 | U:417-637 | DNA_gyraseB_C,Toprim | 2006 → 2006.1 → 2006.1.3 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors