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PDB 5DFE

X-RAY DIFFRACTION3.10 Å0 chains118 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

All Domains (118)

#ChainDomain IDRangeFamilyClassification
1QBe5dfeQB1QB:7-237Ribosomal_S22007 → 2007.6 → 2007.6.1
2QCe5dfeQC1QC:2-106KH_2327 → 327.11 → 327.11.1
3QCe5dfeQC2QC:107-207Ribosomal_S3_C230 → 230.2 → 230.2.1
4QDe5dfeQD1QD:2-209Ribosomal_S4,S4221 → 221.1 → 221.1.2
5QEe5dfeQE1QE:74-152Ribosomal_S5_C212 → 212.1 → 212.1.1
6QEe5dfeQE2QE:5-73Ribosomal_S5330 → 330.1 → 330.1.1
7QFe5dfeQF1QF:1-100Ribosomal_S6304 → 304.12 → 304.12.1
8QGe5dfeQG1QG:2-156Ribosomal_S7167 → 167.1 → 167.1.1
9QHe5dfeQH1QH:67-138Ribosomal_S84988 → 4988.1 → 4988.1.1
10QHe5dfeQH2QH:2-66Ribosomal_S8320 → 320.2 → 320.2.1
11QIe5dfeQI1QI:2-128Ribosomal_S9212 → 212.1 → 212.1.1
12QJe5dfeQJ1QJ:4-100Ribosomal_S10304 → 304.44 → 304.44.1
13QKe5dfeQK1QK:13-126Ribosomal_S112484 → 2484.1 → 2484.1.1
14QLe5dfeQL1QL:5-126Ribosom_S12_S232 → 2.1 → 2.1.1
15QMe5dfeQM1QM:2-117Ribosomal_S13102 → 102.2 → 102.2.1
16QNe5dfeQN1QN:2-61Ribosomal_S14377 → 377.1 → 377.1.1
17QOe5dfeQO1QO:2-89Ribosomal_S15616 → 616.1 → 616.1.1
18QPe5dfeQP1QP:1-82Ribosomal_S16837 → 837.1 → 837.1.1
19QQe5dfeQQ1QQ:2-100Ribosomal_S172 → 2.1 → 2.1.1
20QRe5dfeQR1QR:20-87Ribosomal_S18101 → 101.1 → 101.1.1
21QSe5dfeQS1QS:2-84Ribosomal_S19838 → 838.1 → 838.1.1
22QTe5dfeQT1QT:8-103Ribosomal_S20p604 → 604.9 → 604.9.1
23QYe5dfeQY1QY:6-120PCRF4006 → 4006.1 → 4006.1.1
24QYe5dfeQY2QY:313-362330.3.1.0330 → 330.3 → 330.3.1
25QYe5dfeQY3QY:226-312RF-1330 → 330.3 → 330.3.1
26QYe5dfeQY4QY:121-225PCRF304 → 304.116 → 304.116.1
27R0e5dfeR01R0:8-84Ribosomal_L27325 → 325.1 → 325.1.8
28R1e5dfeR11R1:2-98Ribosomal_L284232 → 4232.1 → 4232.1.1
29R2e5dfeR21R2:1-70Ribosomal_L29192 → 192.4 → 192.4.1
30R3e5dfeR31R3:2-60Ribosomal_L30887 → 887.1 → 887.1.1
31R4e5dfeR41R4:1-69Ribosomal_L314987 → 4987.1 → 4987.1.1
32R5e5dfeR51R5:2-60Ribosomal_L32p375 → 375.1 → 375.1.1
33R6e5dfeR61R6:2-54Ribosomal_L33375 → 375.1 → 375.1.1
34R7e5dfeR71R7:1-48Ribosomal_L343074 → 3074.1 → 3074.1.1
35R8e5dfeR81R8:2-65Ribosomal_L35p4281 → 4281.1 → 4281.1.1
36R9e5dfeR91R9:1-37Ribosomal_L36919 → 919.1 → 919.1.1
37RDe5dfeRD1RD:127-276Ribosomal_L2_C4 → 4.1 → 4.1.1
38RDe5dfeRD2RD:2-126Ribosomal_L22 → 2.1 → 2.1.1
39REe5dfeRE1RE:1-204Ribosomal_L31 → 1.1 → 1.1.7
40RFe5dfeRF1RF:6-208Ribosomal_L47559 → 7559.1 → 7559.1.1
41RGe5dfeRG1RG:2-182Ribosomal_L5,Ribosomal_L5_C882 → 882.1 → 882.1.1
42RHe5dfeRH1RH:2-82Ribosomal_L6318 → 318.1 → 318.1.1
43RHe5dfeRH2RH:83-175Ribosomal_L6318 → 318.1 → 318.1.1
44RIe5dfeRI1RI:1-55Ribosomal_L9_N4076 → 4076.1 → 4076.1.1
45RIe5dfeRI2RI:56-147Ribosomal_L9_C523 → 523.1 → 523.1.1
46RNe5dfeRN1RN:1-140Ribosomal_L132490 → 2490.2 → 2490.2.1
47ROe5dfeRO1RO:1-122Ribosomal_L143174 → 3174.1 → 3174.1.1
48RPe5dfeRP1RP:1-149Ribosomal_L27A, PF294712490 → 2490.3 → 2490.3.1
49RQe5dfeRQ1RQ:1-141Ribosomal_L16325 → 325.1 → 325.1.5
50RRe5dfeRR1RR:1-118Ribosomal_L17218 → 218.3 → 218.3.1
51RSe5dfeRS1RS:3-112Ribosomal_L18p2484 → 2484.1 → 2484.1.1
52RTe5dfeRT1RT:1-131Ribosomal_L194 → 4.1 → 4.1.1
53RUe5dfeRU1RU:2-117Ribosomal_L20143 → 143.2 → 143.2.1
54RVe5dfeRV1RV:1-101Ribosomal_L21p4186 → 4186.1 → 4186.1.1
55RWe5dfeRW1RW:1-112Ribosomal_L22218 → 218.2 → 218.2.1
56RXe5dfeRX1RX:1-95Ribosomal_L23304 → 304.109 → 304.109.1
57RYe5dfeRY1RY:1-107KOW,ribosomal_L244 → 4.1 → 4.1.1
58RZe5dfeRZ1RZ:1-92Ribosomal_L25p239 → 239.1 → 239.1.1
59RZe5dfeRZ2RZ:93-203Ribosomal_TL5_C240 → 240.1 → 240.1.1
60XBe5dfeXB1XB:7-237Ribosomal_S22007 → 2007.6 → 2007.6.1
61XCe5dfeXC1XC:107-207Ribosomal_S3_C230 → 230.2 → 230.2.1
62XCe5dfeXC2XC:2-106KH_2327 → 327.11 → 327.11.1
63XDe5dfeXD1XD:2-209Ribosomal_S4,S4221 → 221.1 → 221.1.2
64XEe5dfeXE1XE:5-73Ribosomal_S5330 → 330.1 → 330.1.1
65XEe5dfeXE2XE:74-152Ribosomal_S5_C212 → 212.1 → 212.1.1
66XFe5dfeXF1XF:1-100Ribosomal_S6304 → 304.12 → 304.12.1
67XGe5dfeXG1XG:2-156Ribosomal_S7167 → 167.1 → 167.1.1
68XHe5dfeXH1XH:2-66Ribosomal_S8320 → 320.2 → 320.2.1
69XHe5dfeXH2XH:67-138Ribosomal_S84988 → 4988.1 → 4988.1.1
70XIe5dfeXI1XI:2-127Ribosomal_S9212 → 212.1 → 212.1.1
71XJe5dfeXJ1XJ:5-100Ribosomal_S10304 → 304.44 → 304.44.1
72XKe5dfeXK1XK:13-126Ribosomal_S112484 → 2484.1 → 2484.1.1
73XLe5dfeXL1XL:5-126Ribosom_S12_S232 → 2.1 → 2.1.1
74XMe5dfeXM1XM:3-116Ribosomal_S13102 → 102.2 → 102.2.1
75XNe5dfeXN1XN:2-61Ribosomal_S14377 → 377.1 → 377.1.1
76XOe5dfeXO1XO:2-89Ribosomal_S15616 → 616.1 → 616.1.1
77XPe5dfeXP1XP:1-82Ribosomal_S16837 → 837.1 → 837.1.1
78XQe5dfeXQ1XQ:2-100Ribosomal_S172 → 2.1 → 2.1.1
79XRe5dfeXR1XR:20-87Ribosomal_S18101 → 101.1 → 101.1.1
80XSe5dfeXS1XS:2-84Ribosomal_S19838 → 838.1 → 838.1.1
81XTe5dfeXT1XT:6-103Ribosomal_S20p604 → 604.9 → 604.9.1
82XYe5dfeXY1XY:6-120PCRF4006 → 4006.1 → 4006.1.1
83XYe5dfeXY2XY:313-362330.3.1.0330 → 330.3 → 330.3.1
84XYe5dfeXY3XY:121-225PCRF304 → 304.116 → 304.116.1
85XYe5dfeXY4XY:226-312RF-1330 → 330.3 → 330.3.1
86Y0e5dfeY01Y0:8-84Ribosomal_L27325 → 325.1 → 325.1.8
87Y1e5dfeY11Y1:2-98Ribosomal_L284232 → 4232.1 → 4232.1.1
88Y2e5dfeY21Y2:1-70Ribosomal_L29192 → 192.4 → 192.4.1
89Y3e5dfeY31Y3:2-60Ribosomal_L30887 → 887.1 → 887.1.1
90Y4e5dfeY41Y4:1-69Ribosomal_L314987 → 4987.1 → 4987.1.1
91Y5e5dfeY51Y5:2-60Ribosomal_L32p375 → 375.1 → 375.1.1
92Y6e5dfeY61Y6:2-54Ribosomal_L33375 → 375.1 → 375.1.1
93Y7e5dfeY71Y7:1-48Ribosomal_L343074 → 3074.1 → 3074.1.1
94Y8e5dfeY81Y8:2-65Ribosomal_L35p4281 → 4281.1 → 4281.1.1
95Y9e5dfeY91Y9:1-37Ribosomal_L36919 → 919.1 → 919.1.1
96YDe5dfeYD1YD:2-126Ribosomal_L22 → 2.1 → 2.1.1
97YDe5dfeYD2YD:127-276Ribosomal_L2_C4 → 4.1 → 4.1.1
98YEe5dfeYE1YE:1-204Ribosomal_L31 → 1.1 → 1.1.7
99YFe5dfeYF1YF:6-208Ribosomal_L47559 → 7559.1 → 7559.1.1
100YGe5dfeYG1YG:2-182Ribosomal_L5,Ribosomal_L5_C882 → 882.1 → 882.1.1
101YHe5dfeYH1YH:3-82Ribosomal_L6318 → 318.1 → 318.1.1
102YHe5dfeYH2YH:83-175Ribosomal_L6318 → 318.1 → 318.1.1
103YIe5dfeYI1YI:1-55Ribosomal_L9_N4076 → 4076.1 → 4076.1.1
104YIe5dfeYI2YI:56-146Ribosomal_L9_C523 → 523.1 → 523.1.1
105YNe5dfeYN1YN:1-140Ribosomal_L132490 → 2490.2 → 2490.2.1
106YOe5dfeYO1YO:1-122Ribosomal_L143174 → 3174.1 → 3174.1.1
107YPe5dfeYP1YP:1-149Ribosomal_L27A, PF294712490 → 2490.3 → 2490.3.1
108YQe5dfeYQ1YQ:1-141Ribosomal_L16325 → 325.1 → 325.1.5
109YRe5dfeYR1YR:1-118Ribosomal_L17218 → 218.3 → 218.3.1
110YSe5dfeYS1YS:3-112Ribosomal_L18p2484 → 2484.1 → 2484.1.1
111YTe5dfeYT1YT:1-131Ribosomal_L194 → 4.1 → 4.1.1
112YUe5dfeYU1YU:2-117Ribosomal_L20143 → 143.2 → 143.2.1
113YVe5dfeYV1YV:1-101Ribosomal_L21p4186 → 4186.1 → 4186.1.1
114YWe5dfeYW1YW:1-112Ribosomal_L22218 → 218.2 → 218.2.1
115YXe5dfeYX1YX:1-95Ribosomal_L23304 → 304.109 → 304.109.1
116YYe5dfeYY1YY:1-107KOW,ribosomal_L244 → 4.1 → 4.1.1
117YZe5dfeYZ1YZ:1-93Ribosomal_L25p239 → 239.1 → 239.1.1
118YZe5dfeYZ2YZ:94-201Ribosomal_TL5_C240 → 240.1 → 240.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors