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PDB 5DGE

X-RAY DIFFRACTION3.45 Å0 chains185 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

All Domains (185)

#ChainDomain IDRangeFamilyClassification
1c0e5dgec01c0:1-98S10_plectin101 → 101.1 → 101.1.2
2C0e5dgeC01C0:1-96S10_plectin101 → 101.1 → 101.1.2
3c1e5dgec11c1:2-147Ribosomal_S17,Ribosomal_S17_N2 → 2.1 → 2.1.1
4C1e5dgeC11C1:2-156Ribosomal_S17,Ribosomal_S17_N2 → 2.1 → 2.1.1
5c2e5dgec21c2:20-143Ribosomal_L7Ae301 → 301.1 → 301.1.1
6C2e5dgeC21C2:20-143Ribosomal_L7Ae301 → 301.1 → 301.1.1
7c3e5dgec31c3:2-82Ribosomal_S13_N101 → 101.40 → 101.40.1
8c3e5dgec32c3:83-151Ribosomal_S15616 → 616.1 → 616.1.1
9C3e5dgeC31C3:83-151Ribosomal_S15616 → 616.1 → 616.1.1
10C3e5dgeC32C3:2-82Ribosomal_S13_N101 → 101.40 → 101.40.1
11c4e5dgec41c4:10-137Ribosomal_S112484 → 2484.1 → 2484.1.1
12C4e5dgeC41C4:11-137Ribosomal_S112484 → 2484.1 → 2484.1.1
13c5e5dgec51c5:4-138Ribosomal_S19838 → 838.1 → 838.1.1
14C5e5dgeC51C5:8-131Ribosomal_S19838 → 838.1 → 838.1.1
15c6e5dgec61c6:2-143Ribosomal_S9212 → 212.1 → 212.1.1
16C6e5dgeC61C6:3-143Ribosomal_S9212 → 212.1 → 212.1.1
17c7e5dgec71c7:2-122Ribosomal_S17e101 → 101.1 → 101.1.17
18C7e5dgeC71C7:2-126Ribosomal_S17e101 → 101.1 → 101.1.17
19c8e5dgec81c8:2-146Ribosomal_S13102 → 102.2 → 102.2.1
20C8e5dgeC81C8:2-146Ribosomal_S13102 → 102.2 → 102.2.1
21c9e5dgec91c9:2-144Ribosomal_S19e101 → 101.1 → 101.1.2
22C9e5dgeC91C9:2-144Ribosomal_S19e101 → 101.1 → 101.1.2
23d0e5dged01d0:12-121Ribosomal_S10304 → 304.44 → 304.44.1
24D0e5dgeD01D0:15-121Ribosomal_S10304 → 304.44 → 304.44.1
25d1e5dged11d1:1-87Ribosomal_S21e3167 → 3167.1 → 3167.1.1
26D1e5dgeD11D1:1-87Ribosomal_S21e3167 → 3167.1 → 3167.1.1
27d2e5dged21d2:2-67Ribosomal_S8320 → 320.2 → 320.2.1
28d2e5dged22d2:68-130Ribosomal_S84988 → 4988.1 → 4988.1.1
29D2e5dgeD21D2:68-130Ribosomal_S84988 → 4988.1 → 4988.1.1
30D2e5dgeD22D2:2-67Ribosomal_S8320 → 320.2 → 320.2.1
31d3e5dged31d3:2-145Ribosom_S12_S232 → 2.1 → 2.1.1
32D3e5dgeD31D3:2-145Ribosom_S12_S232 → 2.1 → 2.1.1
33d4e5dged41d4:2-135Ribosomal_S24e304 → 304.109 → 304.109.1
34D4e5dgeD41D4:2-135Ribosomal_S24e304 → 304.109 → 304.109.1
35d5e5dged51d5:37-105Ribosomal_S25101 → 101.1 → 101.1.2
36D5e5dgeD51D5:36-105Ribosomal_S25101 → 101.1 → 101.1.2
37d6e5dged61d6:2-98Ribosomal_S26e377 → 377.1 → 377.1.1
38D6e5dgeD61D6:2-98Ribosomal_S26e377 → 377.1 → 377.1.1
39d7e5dged71d7:2-82Ribosomal_S27e375 → 375.1 → 375.1.1
40D7e5dgeD71D7:2-82Ribosomal_S27e375 → 375.1 → 375.1.1
41d8e5dged81d8:5-67Ribosomal_S28e2 → 2.1 → 2.1.1
42D8e5dgeD81D8:5-67Ribosomal_S28e2 → 2.1 → 2.1.1
43d9e5dged91d9:4-56Ribosomal_S14377 → 377.1 → 377.1.1
44D9e5dgeD91D9:4-56Ribosomal_S14377 → 377.1 → 377.1.1
45e0e5dgee01e0:1-62Ribosomal_S303168 → 3168.1 → 3168.1.1
46E0e5dgeE01E0:1-60Ribosomal_S303168 → 3168.1 → 3168.1.1
47e1e5dgee11e1:77-152Ribosomal_S27375 → 375.1 → 375.1.1
48E1e5dgeE11E1:82-152Ribosomal_S27375 → 375.1 → 375.1.1
49fe5dgef1f:10-84IF5A-like_N4 → 4.1 → 4.1.1
50fe5dgef2f:85-157eIF-5a2 → 2.1 → 2.1.1
51l2e5dgel21l2:99-253Ribosomal_L2_C4 → 4.1 → 4.1.1
52l2e5dgel22l2:2-98Ribosomal_L22 → 2.1 → 2.1.1
53L2e5dgeL21L2:99-253Ribosomal_L2_C4 → 4.1 → 4.1.1
54L2e5dgeL22L2:2-98Ribosomal_L22 → 2.1 → 2.1.1
55l3e5dgel31l3:2-387Ribosomal_L31 → 1.1 → 1.1.7
56L3e5dgeL31L3:2-387Ribosomal_L31 → 1.1 → 1.1.7
57l4e5dgel41l4:2-269Ribosomal_L47559 → 7559.1 → 7559.1.1
58l4e5dgel42l4:270-362Ribos_L4_asso_C3319 → 3319.1 → 3319.1.1
59L4e5dgeL41L4:2-269Ribosomal_L47559 → 7559.1 → 7559.1.1
60L4e5dgeL42L4:270-362Ribos_L4_asso_C3319 → 3319.1 → 3319.1.1
61l5e5dgel51l5:4-297Ribosomal_L18_c,Ribosomal_L5e2484 → 2484.1 → 2484.1.1
62L5e5dgeL51L5:2-297Ribosomal_L18_c,Ribosomal_L5e2484 → 2484.1 → 2484.1.1
63l6e5dgel61l6:2-176Ribosomal_L6e4 → 4.1 → 4.1.1
64L6e5dgeL61L6:2-109,L6:129-176Ribosomal_L6e4 → 4.1 → 4.1.1
65l7e5dgel71l7:22-244Ribosomal_L30,Ribosomal_L30_N887 → 887.1 → 887.1.1
66L7e5dgeL71L7:23-244Ribosomal_L30,Ribosomal_L30_N887 → 887.1 → 887.1.1
67l8e5dgel81l8:24-254Ribosomal_L7Ae301 → 301.1 → 301.1.1
68L8e5dgeL81L8:24-256Ribosomal_L7Ae301 → 301.1 → 301.1.1
69l9e5dgel91l9:1-85Ribosomal_L6318 → 318.1 → 318.1.1
70l9e5dgel92l9:86-191Ribosomal_L6318 → 318.1 → 318.1.1
71L9e5dgeL91L9:1-85Ribosomal_L6318 → 318.1 → 318.1.1
72L9e5dgeL92L9:86-191Ribosomal_L6318 → 318.1 → 318.1.1
73m0e5dgem01m0:2-221Ribosomal_L16325 → 325.1 → 325.1.5
74M0e5dgeM01M0:2-221Ribosomal_L16325 → 325.1 → 325.1.5
75m1e5dgem11m1:6-174Ribosomal_L5,Ribosomal_L5_C882 → 882.1 → 882.1.1
76M1e5dgeM11M1:6-174Ribosomal_L5,Ribosomal_L5_C882 → 882.1 → 882.1.1
77m2e5dgem21m2:88-163Ribosomal_L11101 → 101.1 → 101.1.16
78m2e5dgem22m2:9-87Ribosomal_L11_N3781 → 3781.1 → 3781.1.1
79m3e5dgem31m3:2-195Ribosomal_L13e3210 → 3210.1 → 3210.1.1
80M3e5dgeM31M3:2-194Ribosomal_L13e3210 → 3210.1 → 3210.1.1
81m4e5dgem41m4:2-138KOW,Ribosomal_L14e4 → 4.1 → 4.1.1
82M4e5dgeM41M4:3-138KOW,Ribosomal_L14e4 → 4.1 → 4.1.1
83m5e5dgem51m5:2-204Ribosomal_L15e304 → 304.109 → 304.109.1
84M5e5dgeM51M5:2-204Ribosomal_L15e304 → 304.109 → 304.109.1
85m6e5dgem61m6:3-199Ribosomal_L132490 → 2490.2 → 2490.2.1
86M6e5dgeM61M6:3-199Ribosomal_L132490 → 2490.2 → 2490.2.1
87m7e5dgem71m7:2-156Ribosomal_L22218 → 218.2 → 218.2.1
88M7e5dgeM71M7:2-184Ribosomal_L22218 → 218.2 → 218.2.1
89m8e5dgem81m8:2-186Ribosomal_L182490 → 2490.3 → 2490.3.1
90M8e5dgeM81M8:2-186Ribosomal_L182490 → 2490.3 → 2490.3.1
91m9e5dgem91m9:57-189Ribosomal_L19e_C3050 → 3050.1 → 3050.1.1
92m9e5dgem92m9:2-56Ribosomal_L19e637 → 637.1 → 637.1.1
93M9e5dgeM91M9:2-56Ribosomal_L19e637 → 637.1 → 637.1.1
94M9e5dgeM92M9:57-189Ribosomal_L19e_C3050 → 3050.1 → 3050.1.1
95n0e5dgen01n0:70-172Ribosomal_L18A3115 → 3115.1 → 3115.1.1
96n0e5dgen02n0:1-693115.1.1.03115 → 3115.1 → 3115.1.1
97N0e5dgeN01N0:1-693115.1.1.03115 → 3115.1 → 3115.1.1
98N0e5dgeN02N0:70-172Ribosomal_L18A3115 → 3115.1 → 3115.1.1
99n1e5dgen11n1:2-160Ribosomal_L21e4 → 4.1 → 4.1.1
100N1e5dgeN11N1:2-160Ribosomal_L21e4 → 4.1 → 4.1.1
101n2e5dgen21n2:11-108Ribosomal_L22e3715 → 3715.1 → 3715.1.1
102N2e5dgeN21N2:9-108Ribosomal_L22e3715 → 3715.1 → 3715.1.1
103n3e5dgen31n3:2-137Ribosomal_L143174 → 3174.1 → 3174.1.1
104N3e5dgeN31N3:2-137Ribosomal_L143174 → 3174.1 → 3174.1.1
105n4e5dgen41n4:1-135Ribosomal_L24e377 → 377.1 → 377.1.1
106N4e5dgeN41N4:1-98Ribosomal_L24e377 → 377.1 → 377.1.1
107n5e5dgen51n5:23-142Ribosomal_L23,Ribosomal_L23eN304 → 304.109 → 304.109.1
108N5e5dgeN51N5:22-142Ribosomal_L23,Ribosomal_L23eN304 → 304.109 → 304.109.1
109n6e5dgen61n6:2-127KOW, Ribosomal_L264 → 4.1 → 4.1.1
110N6e5dgeN61N6:2-127KOW, Ribosomal_L264 → 4.1 → 4.1.1
111n7e5dgen71n7:2-136Ribosomal_L27e4 → 4.1 → 4.1.1
112N7e5dgeN71N7:2-136Ribosomal_L27e4 → 4.1 → 4.1.1
113n8e5dgen81n8:2-149Ribosomal_L27A2490 → 2490.3 → 2490.3.1
114N8e5dgeN81N8:2-149Ribosomal_L27A2490 → 2490.3 → 2490.3.1
115n9e5dgen91n9:2-59Ribosomal_L29e3212 → 3212.1 → 3212.1.1
116N9e5dgeN91N9:2-59Ribosomal_L29e3212 → 3212.1 → 3212.1.1
117o0e5dgeo01o0:6-105Ribosomal_L7Ae301 → 301.1 → 301.1.1
118O0e5dgeO01O0:9-105Ribosomal_L7Ae301 → 301.1 → 301.1.1
119o1e5dgeo11o1:4-112Ribosomal_L31e259 → 259.1 → 259.1.1
120O1e5dgeO11O1:4-112Ribosomal_L31e259 → 259.1 → 259.1.1
121o2e5dgeo21o2:2-128Ribosomal_L32e2490 → 2490.1 → 2490.1.1
122O2e5dgeO21O2:2-128Ribosomal_L32e2490 → 2490.1 → 2490.1.1
123o3e5dgeo31o3:2-107Ribosomal_L35Ae1 → 1.1 → 1.1.7
124O3e5dgeO31O3:2-107Ribosomal_L35Ae1 → 1.1 → 1.1.7
125o4e5dgeo41o4:1-108Ribosomal_L34e377 → 377.12 → 377.12.1
126O4e5dgeO41O4:1-108Ribosomal_L34e377 → 377.12 → 377.12.1
127o5e5dgeo51o5:2-120Ribosomal_L29192 → 192.4 → 192.4.1
128O5e5dgeO51O5:2-120Ribosomal_L29192 → 192.4 → 192.4.1
129o6e5dgeo61o6:2-100Ribosomal_L36e3166 → 3166.1 → 3166.1.1
130O6e5dgeO61O6:2-100Ribosomal_L36e3166 → 3166.1 → 3166.1.1
131o7e5dgeo71o7:2-88Ribosomal_L37e375 → 375.1 → 375.1.1
132O7e5dgeO71O7:2-88Ribosomal_L37e375 → 375.1 → 375.1.1
133o8e5dgeo81o8:2-78Ribosomal_L38e896 → 896.1 → 896.1.1
134O8e5dgeO81O8:2-78Ribosomal_L38e896 → 896.1 → 896.1.1
135o9e5dgeo91o9:2-51Ribosomal_L39585 → 585.1 → 585.1.1
136O9e5dgeO91O9:2-51Ribosomal_L39585 → 585.1 → 585.1.1
137p0e5dgep01p0:3-107,p0:184-221Ribosomal_L10304 → 304.60 → 304.60.1
138p1e5dgep11p1:1-471091.1.1.01091 → 1091.1 → 1091.1.1
139p2e5dgep21p2:1-461091.1.1.01091 → 1091.1 → 1091.1.1
140q0e5dgeq01q0:77-128Ribosomal_L40e375 → 375.1 → 375.1.1
141Q0e5dgeQ01Q0:77-128Ribosomal_L40e375 → 375.1 → 375.1.1
142q1e5dgeq11q1:1-25Ribosomal_L416069 → 6069.1 → 6069.1.1
143Q1e5dgeQ11Q1:1-25Ribosomal_L416069 → 6069.1 → 6069.1.1
144q2e5dgeq21q2:2-106Ribosomal_L44375 → 375.1 → 375.1.1
145Q2e5dgeQ21Q2:2-106Ribosomal_L44375 → 375.1 → 375.1.1
146q3e5dgeq31q3:2-92Ribosomal_L37ae375 → 375.1 → 375.1.1
147Q3e5dgeQ31Q3:2-92Ribosomal_L37ae375 → 375.1 → 375.1.1
148s0e5dges01s0:2-207Ribosomal_S22007 → 2007.6 → 2007.6.1
149S0e5dgeS01S0:2-207Ribosomal_S22007 → 2007.6 → 2007.6.1
150s1e5dges11s1:20-113Ribosomal_S3Ae239 → 239.5 → 239.5.1
151s1e5dges12s1:114-235Ribosomal_S3Ae230 → 230.6 → 230.6.1
152S1e5dgeS11S1:114-233Ribosomal_S3Ae230 → 230.6 → 230.6.1
153S1e5dgeS12S1:20-113Ribosomal_S3Ae239 → 239.5 → 239.5.1
154s2e5dges21s2:34-108Ribosomal_S53274 → 3274.1 → 3274.1.1
155s2e5dges22s2:109-175Ribosomal_S5330 → 330.1 → 330.1.1
156s2e5dges23s2:176-250Ribosomal_S5_C212 → 212.1 → 212.1.1
157S2e5dgeS21S2:34-108Ribosomal_S53274 → 3274.1 → 3274.1.1
158S2e5dgeS22S2:176-250Ribosomal_S5_C212 → 212.1 → 212.1.1
159S2e5dgeS23S2:109-175Ribosomal_S5330 → 330.1 → 330.1.1
160s3e5dges31s3:3-91KH_2327 → 327.11 → 327.11.1
161s3e5dges32s3:92-225Ribosomal_S3_C230 → 230.2 → 230.2.1
162S3e5dgeS31S3:92-225Ribosomal_S3_C230 → 230.2 → 230.2.1
163S3e5dgeS32S3:3-91KH_2327 → 327.11 → 327.11.1
164s4e5dges41s4:2-116Ribosomal_S4e,S4,RS4NT221 → 221.1 → 221.1.2
165s4e5dges42s4:117-175Ribosomal_S4e2 → 2.1 → 2.1.1
166s4e5dges43s4:176-261KOW,40S_S4_C4 → 4.1 → 4.1.1
167S4e5dgeS41S4:176-261KOW,40S_S4_C4 → 4.1 → 4.1.1
168S4e5dgeS42S4:2-116Ribosomal_S4e,S4,RS4NT221 → 221.1 → 221.1.2
169S4e5dgeS43S4:117-175Ribosomal_S4e2 → 2.1 → 2.1.1
170s5e5dges51s5:20-225Ribosomal_S7167 → 167.1 → 167.1.1
171S5e5dgeS51S5:20-225Ribosomal_S7167 → 167.1 → 167.1.1
172s6e5dges61s6:1-218Ribosomal_S6e239 → 239.1 → 239.1.1
173S6e5dgeS61S6:1-226Ribosomal_S6e239 → 239.1 → 239.1.1
174s7e5dges71s7:2-105Ribosomal_S7e327 → 327.18 → 327.18.1
175s7e5dges72s7:106-187Ribosomal_S7e327 → 327.18 → 327.18.1
176S7e5dgeS71S7:4-105Ribosomal_S7e327 → 327.18 → 327.18.1
177S7e5dgeS72S7:106-187Ribosomal_S7e327 → 327.18 → 327.18.1
178s8e5dges81s8:2-200Ribosomal_S8e3174 → 3174.1 → 3174.1.1
179S8e5dgeS81S8:2-200Ribosomal_S8e3174 → 3174.1 → 3174.1.1
180s9e5dges91s9:2-186Ribosomal_S4,S4221 → 221.1 → 221.1.2
181S9e5dgeS91S9:2-186Ribosomal_S4,S4221 → 221.1 → 221.1.2
182sMe5dgesM1sM:23-85,sM:119-1743451.1.1.03451 → 3451.1 → 3451.1.1
183SMe5dgeSM1SM:9-176HABP4_PAI-RBP13451 → 3451.1 → 3451.1.1
184sRe5dgesR1sR:2-319WD405 → 5.1 → 5.1.4
185SRe5dgeSR1SR:2-319WD405 → 5.1 → 5.1.4

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors