PDB 5DMK
X-RAY DIFFRACTION2.45 Å0 chains16 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
Loading viewer...
Domains by Chain
Chain Aview chain
2 domainsChain Bview chain
2 domainsChain Cview chain
2 domainsChain Dview chain
2 domainsChain Eview chain
2 domainsChain Fview chain
2 domainsChain Gview chain
2 domainsChain Hview chain
2 domainsAll Domains (16)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e5dmkA1 | A:2-83 | MHC_II_alpha | 233 → 233.1 → 233.1.1 |
| 2 | A | e5dmkA2 | A:84-172 | C1-set | 11 → 11.1 → 11.1.1 |
| 3 | B | e5dmkB1 | B:88-192 | C1-set | 11 → 11.1 → 11.1.1 |
| 4 | B | e5dmkB2 | B:4-86 | MHC_II_beta | 233 → 233.1 → 233.1.1 |
| 5 | C | e5dmkC1 | C:84-173 | C1-set | 11 → 11.1 → 11.1.1 |
| 6 | C | e5dmkC2 | C:1-83 | MHC_II_alpha | 233 → 233.1 → 233.1.1 |
| 7 | D | e5dmkD1 | D:88-192 | C1-set | 11 → 11.1 → 11.1.1 |
| 8 | D | e5dmkD2 | D:4-86 | MHC_II_beta | 233 → 233.1 → 233.1.1 |
| 9 | E | e5dmkE1 | E:1-83 | MHC_II_alpha | 233 → 233.1 → 233.1.1 |
| 10 | E | e5dmkE2 | E:84-173 | C1-set | 11 → 11.1 → 11.1.1 |
| 11 | F | e5dmkF1 | F:88-192 | C1-set | 11 → 11.1 → 11.1.1 |
| 12 | F | e5dmkF2 | F:4-86 | MHC_II_beta | 233 → 233.1 → 233.1.1 |
| 13 | G | e5dmkG1 | G:84-173 | C1-set | 11 → 11.1 → 11.1.1 |
| 14 | G | e5dmkG2 | G:1-83 | MHC_II_alpha | 233 → 233.1 → 233.1.1 |
| 15 | H | e5dmkH1 | H:87-191 | C1-set | 11 → 11.1 → 11.1.1 |
| 16 | H | e5dmkH2 | H:4-86 | MHC_II_beta | 233 → 233.1 → 233.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors