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PDB 5DOY

X-RAY DIFFRACTION2.60 Å0 chains110 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

All Domains (110)

#ChainDomain IDRangeFamilyClassification
110e5doy10110:2-84Ribosomal_L27325 → 325.1 → 325.1.8
211e5doy11111:2-98Ribosomal_L284232 → 4232.1 → 4232.1.1
312e5doy12112:1-70Ribosomal_L29192 → 192.4 → 192.4.1
413e5doy13113:2-60Ribosomal_L30887 → 887.1 → 887.1.1
514e5doy14114:1-69Ribosomal_L314987 → 4987.1 → 4987.1.1
615e5doy15115:2-60Ribosomal_L32p375 → 375.1 → 375.1.1
716e5doy16116:2-54Ribosomal_L33375 → 375.1 → 375.1.1
817e5doy17117:1-48Ribosomal_L343074 → 3074.1 → 3074.1.1
918e5doy18118:2-65Ribosomal_L35p4281 → 4281.1 → 4281.1.1
1019e5doy19119:1-37Ribosomal_L36919 → 919.1 → 919.1.1
111be5doy1b11b:7-237Ribosomal_S22007 → 2007.6 → 2007.6.1
121ce5doy1c11c:107-207Ribosomal_S3_C230 → 230.2 → 230.2.1
131ce5doy1c21c:2-106KH_2327 → 327.11 → 327.11.1
141de5doy1d11d:2-209Ribosomal_S4,S4221 → 221.1 → 221.1.2
151De5doy1D11D:2-126Ribosomal_L22 → 2.1 → 2.1.1
161De5doy1D21D:127-276Ribosomal_L2_C4 → 4.1 → 4.1.1
171ee5doy1e11e:74-152Ribosomal_S5_C212 → 212.1 → 212.1.1
181ee5doy1e21e:5-73Ribosomal_S5330 → 330.1 → 330.1.1
191Ee5doy1E11E:1-204Ribosomal_L31 → 1.1 → 1.1.7
201fe5doy1f11f:1-100Ribosomal_S6304 → 304.12 → 304.12.1
211Fe5doy1F11F:6-208Ribosomal_L47559 → 7559.1 → 7559.1.1
221ge5doy1g11g:2-156Ribosomal_S7167 → 167.1 → 167.1.1
231Ge5doy1G11G:2-182Ribosomal_L5,Ribosomal_L5_C882 → 882.1 → 882.1.1
241he5doy1h11h:2-66Ribosomal_S8320 → 320.2 → 320.2.1
251he5doy1h21h:67-138Ribosomal_S84988 → 4988.1 → 4988.1.1
261He5doy1H11H:2-82Ribosomal_L6318 → 318.1 → 318.1.1
271He5doy1H21H:83-175Ribosomal_L6318 → 318.1 → 318.1.1
281ie5doy1i11i:2-128Ribosomal_S9212 → 212.1 → 212.1.1
291Ie5doy1I11I:54-146Ribosomal_L9_C523 → 523.1 → 523.1.1
301Ie5doy1I21I:1-53Ribosomal_L9_N4076 → 4076.1 → 4076.1.1
311je5doy1j11j:4-100Ribosomal_S10304 → 304.44 → 304.44.1
321ke5doy1k11k:13-126Ribosomal_S112484 → 2484.1 → 2484.1.1
331le5doy1l11l:5-126Ribosom_S12_S232 → 2.1 → 2.1.1
341me5doy1m11m:2-124Ribosomal_S13102 → 102.2 → 102.2.1
351ne5doy1n11n:2-61Ribosomal_S14377 → 377.1 → 377.1.1
361Ne5doy1N11N:1-140Ribosomal_L132490 → 2490.2 → 2490.2.1
371oe5doy1o11o:2-89Ribosomal_S15616 → 616.1 → 616.1.1
381Oe5doy1O11O:1-122Ribosomal_L143174 → 3174.1 → 3174.1.1
391pe5doy1p11p:1-82Ribosomal_S16837 → 837.1 → 837.1.1
401Pe5doy1P11P:1-149Ribosomal_L27A, PF294712490 → 2490.3 → 2490.3.1
411qe5doy1q11q:2-100Ribosomal_S172 → 2.1 → 2.1.1
421Qe5doy1Q11Q:1-141Ribosomal_L16325 → 325.1 → 325.1.5
431re5doy1r11r:20-87Ribosomal_S18101 → 101.1 → 101.1.1
441Re5doy1R11R:1-118Ribosomal_L17218 → 218.3 → 218.3.1
451se5doy1s11s:2-84Ribosomal_S19838 → 838.1 → 838.1.1
461Se5doy1S11S:3-112Ribosomal_L18p2484 → 2484.1 → 2484.1.1
471te5doy1t11t:8-103Ribosomal_S20p604 → 604.9 → 604.9.1
481Te5doy1T11T:1-131Ribosomal_L194 → 4.1 → 4.1.1
491Ue5doy1U11U:2-117Ribosomal_L20143 → 143.2 → 143.2.1
501Ve5doy1V11V:1-101Ribosomal_L21p4186 → 4186.1 → 4186.1.1
511We5doy1W11W:1-112Ribosomal_L22218 → 218.2 → 218.2.1
521Xe5doy1X11X:1-95Ribosomal_L23304 → 304.109 → 304.109.1
531Ye5doy1Y11Y:1-107KOW,ribosomal_L244 → 4.1 → 4.1.1
541Ze5doy1Z11Z:93-171Ribosomal_TL5_C240 → 240.1 → 240.1.1
551Ze5doy1Z21Z:1-92Ribosomal_L25p239 → 239.1 → 239.1.1
5620e5doy20120:2-84Ribosomal_L27325 → 325.1 → 325.1.8
5721e5doy21121:2-98Ribosomal_L284232 → 4232.1 → 4232.1.1
5822e5doy22122:1-70Ribosomal_L29192 → 192.4 → 192.4.1
5923e5doy23123:2-60Ribosomal_L30887 → 887.1 → 887.1.1
6024e5doy24124:1-69Ribosomal_L314987 → 4987.1 → 4987.1.1
6125e5doy25125:2-60Ribosomal_L32p375 → 375.1 → 375.1.1
6226e5doy26126:2-54Ribosomal_L33375 → 375.1 → 375.1.1
6327e5doy27127:1-48Ribosomal_L343074 → 3074.1 → 3074.1.1
6428e5doy28128:2-65Ribosomal_L35p4281 → 4281.1 → 4281.1.1
6529e5doy29129:1-37Ribosomal_L36919 → 919.1 → 919.1.1
662be5doy2b12b:7-237Ribosomal_S22007 → 2007.6 → 2007.6.1
672ce5doy2c12c:2-106KH_2327 → 327.11 → 327.11.1
682ce5doy2c22c:107-207Ribosomal_S3_C230 → 230.2 → 230.2.1
692de5doy2d12d:2-209Ribosomal_S4,S4221 → 221.1 → 221.1.2
702De5doy2D12D:2-126Ribosomal_L22 → 2.1 → 2.1.1
712De5doy2D22D:127-276Ribosomal_L2_C4 → 4.1 → 4.1.1
722ee5doy2e12e:74-152Ribosomal_S5_C212 → 212.1 → 212.1.1
732ee5doy2e22e:5-73Ribosomal_S5330 → 330.1 → 330.1.1
742Ee5doy2E12E:1-204Ribosomal_L31 → 1.1 → 1.1.7
752fe5doy2f12f:1-100Ribosomal_S6304 → 304.12 → 304.12.1
762Fe5doy2F12F:6-208Ribosomal_L47559 → 7559.1 → 7559.1.1
772ge5doy2g12g:2-156Ribosomal_S7167 → 167.1 → 167.1.1
782Ge5doy2G12G:2-182Ribosomal_L5,Ribosomal_L5_C882 → 882.1 → 882.1.1
792he5doy2h12h:67-138Ribosomal_S84988 → 4988.1 → 4988.1.1
802he5doy2h22h:2-66Ribosomal_S8320 → 320.2 → 320.2.1
812He5doy2H12H:83-175Ribosomal_L6318 → 318.1 → 318.1.1
822He5doy2H22H:2-82Ribosomal_L6318 → 318.1 → 318.1.1
832ie5doy2i12i:2-128Ribosomal_S9212 → 212.1 → 212.1.1
842Ie5doy2I12I:1-53Ribosomal_L9_N4076 → 4076.1 → 4076.1.1
852Ie5doy2I22I:54-146Ribosomal_L9_C523 → 523.1 → 523.1.1
862je5doy2j12j:5-100Ribosomal_S10304 → 304.44 → 304.44.1
872ke5doy2k12k:13-126Ribosomal_S112484 → 2484.1 → 2484.1.1
882le5doy2l12l:5-126Ribosom_S12_S232 → 2.1 → 2.1.1
892me5doy2m12m:3-124Ribosomal_S13102 → 102.2 → 102.2.1
902ne5doy2n12n:2-61Ribosomal_S14377 → 377.1 → 377.1.1
912Ne5doy2N12N:1-140Ribosomal_L132490 → 2490.2 → 2490.2.1
922oe5doy2o12o:2-89Ribosomal_S15616 → 616.1 → 616.1.1
932Oe5doy2O12O:1-122Ribosomal_L143174 → 3174.1 → 3174.1.1
942pe5doy2p12p:1-82Ribosomal_S16837 → 837.1 → 837.1.1
952Pe5doy2P12P:1-149Ribosomal_L27A, PF294712490 → 2490.3 → 2490.3.1
962qe5doy2q12q:2-100Ribosomal_S172 → 2.1 → 2.1.1
972Qe5doy2Q12Q:1-141Ribosomal_L16325 → 325.1 → 325.1.5
982re5doy2r12r:20-87Ribosomal_S18101 → 101.1 → 101.1.1
992Re5doy2R12R:1-118Ribosomal_L17218 → 218.3 → 218.3.1
1002se5doy2s12s:2-84Ribosomal_S19838 → 838.1 → 838.1.1
1012Se5doy2S12S:3-112Ribosomal_L18p2484 → 2484.1 → 2484.1.1
1022te5doy2t12t:8-103Ribosomal_S20p604 → 604.9 → 604.9.1
1032Te5doy2T12T:1-131Ribosomal_L194 → 4.1 → 4.1.1
1042Ue5doy2U12U:2-117Ribosomal_L20143 → 143.2 → 143.2.1
1052Ve5doy2V12V:1-101Ribosomal_L21p4186 → 4186.1 → 4186.1.1
1062We5doy2W12W:1-112Ribosomal_L22218 → 218.2 → 218.2.1
1072Xe5doy2X12X:1-95Ribosomal_L23304 → 304.109 → 304.109.1
1082Ye5doy2Y12Y:1-107KOW,ribosomal_L244 → 4.1 → 4.1.1
1092Ze5doy2Z12Z:93-174Ribosomal_TL5_C240 → 240.1 → 240.1.1
1102Ze5doy2Z22Z:1-92Ribosomal_L25p239 → 239.1 → 239.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors