PDB 5DYI
X-RAY DIFFRACTION3.71 Å0 chains48 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
All Domains (48)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e5dyiA1 | A:372-460 | AAA_lid_3 | 148 → 148.1 → 148.1.3 |
| 2 | A | e5dyiA2 | A:107-200 | CDC48_2 | 229 → 229.1 → 229.1.1 |
| 3 | A | e5dyiA3 | A:201-371 | AAA | 2004 → 2004.1 → 2004.1.1 |
| 4 | A | e5dyiA4 | A:21-106 | CDC48_N | 1 → 1.1 → 1.1.2 |
| 5 | B | e5dyiB1 | B:21-106 | CDC48_N | 1 → 1.1 → 1.1.2 |
| 6 | B | e5dyiB2 | B:201-371 | AAA | 2004 → 2004.1 → 2004.1.1 |
| 7 | B | e5dyiB3 | B:107-200 | CDC48_2 | 229 → 229.1 → 229.1.1 |
| 8 | B | e5dyiB4 | B:372-458 | AAA_lid_3 | 148 → 148.1 → 148.1.3 |
| 9 | C | e5dyiC1 | C:372-458 | AAA_lid_3 | 148 → 148.1 → 148.1.3 |
| 10 | C | e5dyiC2 | C:201-371 | AAA | 2004 → 2004.1 → 2004.1.1 |
| 11 | C | e5dyiC3 | C:21-106 | CDC48_N | 1 → 1.1 → 1.1.2 |
| 12 | C | e5dyiC4 | C:107-200 | CDC48_2 | 229 → 229.1 → 229.1.1 |
| 13 | D | e5dyiD1 | D:21-106 | CDC48_N | 1 → 1.1 → 1.1.2 |
| 14 | D | e5dyiD2 | D:107-200 | CDC48_2 | 229 → 229.1 → 229.1.1 |
| 15 | D | e5dyiD3 | D:372-459 | AAA_lid_3 | 148 → 148.1 → 148.1.3 |
| 16 | D | e5dyiD4 | D:201-371 | AAA | 2004 → 2004.1 → 2004.1.1 |
| 17 | E | e5dyiE1 | E:201-371 | AAA | 2004 → 2004.1 → 2004.1.1 |
| 18 | E | e5dyiE2 | E:372-458 | AAA_lid_3 | 148 → 148.1 → 148.1.3 |
| 19 | E | e5dyiE3 | E:21-106 | CDC48_N | 1 → 1.1 → 1.1.2 |
| 20 | E | e5dyiE4 | E:107-200 | CDC48_2 | 229 → 229.1 → 229.1.1 |
| 21 | F | e5dyiF1 | F:21-106 | CDC48_N | 1 → 1.1 → 1.1.2 |
| 22 | F | e5dyiF2 | F:107-200 | CDC48_2 | 229 → 229.1 → 229.1.1 |
| 23 | F | e5dyiF3 | F:372-458 | AAA_lid_3 | 148 → 148.1 → 148.1.3 |
| 24 | F | e5dyiF4 | F:201-371 | AAA | 2004 → 2004.1 → 2004.1.1 |
| 25 | G | e5dyiG1 | G:21-106 | CDC48_N | 1 → 1.1 → 1.1.2 |
| 26 | G | e5dyiG2 | G:372-458 | AAA_lid_3 | 148 → 148.1 → 148.1.3 |
| 27 | G | e5dyiG3 | G:201-371 | AAA | 2004 → 2004.1 → 2004.1.1 |
| 28 | G | e5dyiG4 | G:107-200 | CDC48_2 | 229 → 229.1 → 229.1.1 |
| 29 | H | e5dyiH1 | H:21-106 | CDC48_N | 1 → 1.1 → 1.1.2 |
| 30 | H | e5dyiH2 | H:107-200 | CDC48_2 | 229 → 229.1 → 229.1.1 |
| 31 | H | e5dyiH3 | H:372-459 | AAA_lid_3 | 148 → 148.1 → 148.1.3 |
| 32 | H | e5dyiH4 | H:201-371 | AAA | 2004 → 2004.1 → 2004.1.1 |
| 33 | I | e5dyiI1 | I:372-459 | AAA_lid_3 | 148 → 148.1 → 148.1.3 |
| 34 | I | e5dyiI2 | I:21-106 | CDC48_N | 1 → 1.1 → 1.1.2 |
| 35 | I | e5dyiI3 | I:201-371 | AAA | 2004 → 2004.1 → 2004.1.1 |
| 36 | I | e5dyiI4 | I:107-200 | CDC48_2 | 229 → 229.1 → 229.1.1 |
| 37 | J | e5dyiJ1 | J:372-461 | AAA_lid_3 | 148 → 148.1 → 148.1.3 |
| 38 | J | e5dyiJ2 | J:201-371 | AAA | 2004 → 2004.1 → 2004.1.1 |
| 39 | J | e5dyiJ3 | J:21-106 | CDC48_N | 1 → 1.1 → 1.1.2 |
| 40 | J | e5dyiJ4 | J:107-200 | CDC48_2 | 229 → 229.1 → 229.1.1 |
| 41 | K | e5dyiK1 | K:107-200 | CDC48_2 | 229 → 229.1 → 229.1.1 |
| 42 | K | e5dyiK2 | K:21-106 | CDC48_N | 1 → 1.1 → 1.1.2 |
| 43 | K | e5dyiK3 | K:372-459 | AAA_lid_3 | 148 → 148.1 → 148.1.3 |
| 44 | K | e5dyiK4 | K:201-371 | AAA | 2004 → 2004.1 → 2004.1.1 |
| 45 | L | e5dyiL1 | L:201-371 | AAA | 2004 → 2004.1 → 2004.1.1 |
| 46 | L | e5dyiL2 | L:372-458 | AAA_lid_3 | 148 → 148.1 → 148.1.3 |
| 47 | L | e5dyiL3 | L:107-200 | CDC48_2 | 229 → 229.1 → 229.1.1 |
| 48 | L | e5dyiL4 | L:21-106 | CDC48_N | 1 → 1.1 → 1.1.2 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors