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PDB 5FYW

ELECTRON MICROSCOPY0 chains47 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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All Domains (47)

#ChainDomain IDRangeFamilyClassification
1Ae5fywA1A:1113-1141,A:1273-1330RNA_pol_Rpb1_54956 → 4956.1 → 4956.1.1
2Ae5fywA2A:375-435RNA_pol_Rpb1_2275 → 275.1 → 275.1.1
3Ae5fywA3A:520-662RNA_pol_Rpb1_34959 → 4959.1 → 4959.1.1
4Ae5fywA4A:663-871RNA_pol_Rpb1_5,RNA_pol_Rpb1_44958 → 4958.1 → 4958.1.1
5Ae5fywA5A:3-336RNA_pol_Rpb1_14246 → 4246.1 → 4246.1.1
6Ae5fywA6A:872-1059RNA_pol_Rpb1_64957 → 4957.1 → 4957.1.1
7Ae5fywA7A:1060-1112,A:1331-1452RNA_pol_Rpb1_54954 → 4954.1 → 4954.1.1
8Ae5fywA8A:337-374,A:436-519RNA_pol_Rpb1_21 → 1.1 → 1.1.2
9Ae5fywA9A:1142-1272RNA_pol_Rpb1_74955 → 4955.1 → 4955.1.1
10Be5fywB1B:20-218,B:405-541RNA_pol_Rpb2_1,RNA_pol_Rpb2_34010 → 4010.1 → 4010.1.1
11Be5fywB2B:1098-1223RNA_pol_Rpb2_6,RNA_pol_Rpb2_74043 → 4043.1 → 4043.1.1
12Be5fywB3B:542-630RNA_pol_Rpb2_44961 → 4961.1 → 4961.1.1
13Be5fywB4B:851-974RNA_pol_Rpb2_6325 → 325.1 → 325.1.7
14Be5fywB5B:814-850,B:975-1097RNA_pol_Rpb2_61 → 1.1 → 1.1.2
15Be5fywB6B:219-404RNA_pol_Rpb2_24041 → 4041.1 → 4041.1.1
16Be5fywB7B:631-8134042.1.1.04042 → 4042.1 → 4042.1.1
17Ce5fywC1C:4-41,C:173-265RNA_pol_L305 → 305.1 → 305.1.1
18Ce5fywC2C:42-172RNA_pol_A_bac240 → 240.2 → 240.2.1
19De5fywD1D:46-74,D:118-221RNA_pol_Rpb4102 → 102.1 → 102.1.1
20Ee5fywE1E:144-215RNA_pol_Rpb5_C840 → 840.1 → 840.1.1
21Ee5fywE2E:3-143RNA_pol_Rpb5_N2008 → 2008.3 → 2008.3.1
22Fe5fywF1F:72-154RNA_pol_Rpb6152 → 152.1 → 152.1.1
23Ge5fywG1G:81-171S12 → 2.1 → 2.1.1
24Ge5fywG2G:1-80SHS2_Rpb7-N872 → 872.1 → 872.1.1
25He5fywH1H:2-146RNA_pol_Rpb82 → 2.1 → 2.1.1
26Ie5fywI1I:50-117TFIIS_C375 → 375.1 → 375.1.1
27Ie5fywI2I:2-49RNA_POL_M_15KD375 → 375.1 → 375.1.1
28Je5fywJ1J:1-65RNA_pol_N101 → 101.4 → 101.4.1
29Ke5fywK1K:1-112RNA_pol_L_2305 → 305.1 → 305.1.1
30Le5fywL1L:26-70DNA_RNApol_7kD375 → 375.1 → 375.1.1
31Me5fywM1M:229-326TFIIB101 → 101.1 → 101.1.10
32Me5fywM2M:128-228TFIIB101 → 101.1 → 101.1.10
33Me5fywM3M:16-58,M:124-127TF_Zn_Ribbon375 → 375.1 → 375.1.1
34Oe5fywO1O:158-240TBP331 → 331.1 → 331.1.1
35Oe5fywO2O:61-157TBP331 → 331.1 → 331.1.1
36Qe5fywQ1Q:21-35,Q:97-142,Q:327-415TFIIF_alpha59 → 59.1 → 59.1.1
37Re5fywR1R:58-138,R:207-227TFIIF_beta_N59 → 59.1 → 59.1.1
38Re5fywR2R:291-370TFIIF_beta101 → 101.1 → 101.1.2
39Ue5fywU1U:241-286TFIIA74 → 74.1 → 74.1.1
40Ue5fywU2U:2-47TFIIA104 → 104.1 → 104.1.1
41Ve5fywV1V:55-119TFIIA_gamma_C74 → 74.1 → 74.1.1
42Ve5fywV2V:5-54TFIIA_gamma_N104 → 104.1 → 104.1.1
43We5fywW1W:100-169375.1.1.0375 → 375.1 → 375.1.1
44We5fywW2W:6-99TFIIE_alpha101 → 101.1 → 101.1.2
45Xe5fywX1X:188-249TFA2_Winged_2101 → 101.1 → 101.1.2
46Xe5fywX2X:123-187TFIIE_beta101 → 101.1 → 101.1.2
47Xe5fywX3X:256-280TFA2_E-tether101 → 101.1 → 101.1.2

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors