PDB 5GAP
ELECTRON MICROSCOPY0 chains26 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Aview chain
5 domainsChain Bview chain
12 domainsChain Dview chain
1 domainChain Fview chain
3 domainsChain Gview chain
2 domainsChain Hview chain
1 domainChain Jview chain
1 domainChain Kview chain
1 domainAll Domains (26)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e5gapA1 | A:884-1255 | RRM_4 | 304 → 304.48 → 304.48.1 |
| 2 | A | e5gapA2 | A:1256-1575 | U6-snRNA_bdg,U5_2-snRNA_bdg | 4967 → 4967.1 → 4967.1.1 |
| 3 | A | e5gapA3 | A:1829-2104 | PRP8_domainIV | 2484 → 2484.1 → 2484.1.1 |
| 4 | A | e5gapA4 | A:1575-1828 | U6-snRNA_bdg | 2008 → 2008.1 → 2008.1.1 |
| 5 | A | e5gapA5 | A:751-883 | PROCN | 1038 → 1038.1 → 1038.1.1 |
| 6 | B | e5gapB1 | B:1542-1740 | 2004.1.1.0 | 2004 → 2004.1 → 2004.1.1 |
| 7 | B | e5gapB2 | B:701-905 | Helicase_C | 2004 → 2004.1 → 2004.1.1 |
| 8 | B | e5gapB3 | B:1143-1198 | 102.5.1.0 | 102 → 102.5 → 102.5.1 |
| 9 | B | e5gapB4 | B:442-700 | DEAD | 2004 → 2004.1 → 2004.1.1 |
| 10 | B | e5gapB5 | B:1741-1825,B:1847-1858 | SNRNP200_wHTH | 101 → 101.1 → 101.1.2 |
| 11 | B | e5gapB6 | B:1992-2049 | 102.5.1.0 | 102 → 102.5 → 102.5.1 |
| 12 | B | e5gapB7 | B:2050-2163 | Sec63 | 11 → 11.1 → 11.1.1 |
| 13 | B | e5gapB8 | B:906-1010 | SNRNP200_wHTH | 101 → 101.1 → 101.1.2 |
| 14 | B | e5gapB9 | B:1859-1991 | Sec63 | 4156 → 4156.1 → 4156.1.1 |
| 15 | B | e5gapB10 | B:1199-1333 | Sec63 | 11 → 11.1 → 11.1.1 |
| 16 | B | e5gapB11 | B:1334-1541 | DEAD | 2004 → 2004.1 → 2004.1.1 |
| 17 | B | e5gapB12 | B:1011-1142 | Sec63 | 4156 → 4156.1 → 4156.1.1 |
| 18 | D | e5gapD1 | D:2-141 | DIM1 | 2485 → 2485.1 → 2485.1.1 |
| 19 | F | e5gapF1 | F:43-224 | Nop | 606 → 606.1 → 606.1.1 |
| 20 | F | e5gapF2 | F:225-348 | Nop | 102 → 102.1 → 102.1.4 |
| 21 | F | e5gapF3 | F:349-457 | Prp31_C | 1039 → 1039.1 → 1039.1.1 |
| 22 | G | e5gapG1 | G:332-467 | Prp3_C | 304 → 304.110 → 304.110.1 |
| 23 | G | e5gapG2 | G:150-331 | PRP3 | 1040 → 1040.1 → 1040.1.1 |
| 24 | H | e5gapH1 | H:109-465 | WD40 | 5 → 5.1 → 5.1.4 |
| 25 | J | e5gapJ1 | J:155-898 | PF29376 | 109 → 109.4 → 109.4.1 |
| 26 | K | e5gapK1 | K:3-126 | Ribosomal_L7Ae | 301 → 301.1 → 301.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors