ECODEvolutionary Classification of Protein Domains

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PDB 5GJE

ELECTRON MICROSCOPY0 chains10 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain Aview chain

4 domains

e5gjeA1(A:1-262)e5gjeA2(A:308-568)e5gjeA3(A:569-611)e5gjeA4(A:263-307)

Chain Bview chain

4 domains

e5gjeB1(B:890-931)e5gjeB2(B:932-1197)e5gjeB3(B:1198-1243)e5gjeB4(B:631-889)

Chain Cview chain

2 domains

e5gjeC1(C:182-215)e5gjeC2(C:216-266)

All Domains (10)

#	Chain	Domain ID	Range	Family	Classification
1	A	e5gjeA1	A:1-262	Ldl_recept_b	5 → 5.1 → 5.1.3
2	A	e5gjeA2	A:308-568	Ldl_recept_b	5 → 5.1 → 5.1.3
3	A	e5gjeA3	A:569-611	FXa_inhibition	389 → 389.1 → 389.1.1
4	A	e5gjeA4	A:263-307	FXa_inhibition	389 → 389.1 → 389.1.1
5	B	e5gjeB1	B:890-931	FXa_inhibition	389 → 389.1 → 389.1.1
6	B	e5gjeB2	B:932-1197	Ldl_recept_b, DUF5050	5 → 5.1 → 5.1.3
7	B	e5gjeB3	B:1198-1243	FXa_inhibition	389 → 389.1 → 389.1.1
8	B	e5gjeB4	B:631-889	Ldl_recept_b	5 → 5.1 → 5.1.3
9	C	e5gjeC1	C:182-215	DIKK1-2-4_C-subdom1	387 → 387.1 → 387.1.3
10	C	e5gjeC2	C:216-266	DIKK1-2-4_C-subdom2	387 → 387.1 → 387.1.3

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors