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PDB 5GJR

ELECTRON MICROSCOPY0 chains117 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

All Domains (117)

#ChainDomain IDRangeFamilyClassification
10e5gjr010:357-439AAA_lid_3148 → 148.1 → 148.1.3
20e5gjr020:167-356AAA2004 → 2004.1 → 2004.1.1
30e5gjr030:85-166Prot_ATP_ID_OB_C2 → 2.1 → 2.1.1
41e5gjr111:785-816,1:878-939RPN2_C3792 → 3792.1 → 3792.1.1
51e5gjr121:346-784PC_rep, HEAT_2109 → 109.35 → 109.35.1
61e5gjr131:3-272,1:321-345RPN2_N109 → 109.34 → 109.34.1
72e5gjr212:340-3763749.1.1.03749 → 3749.1 → 3749.1.1
82e5gjr222:260-339PCI101 → 101.1 → 101.1.2
92e5gjr232:3-259PSD13_N109 → 109.4 → 109.4.1
103e5gjr313:421-454RPN5_C3749 → 3749.2 → 3749.2.1
113e5gjr323:5-341PSMD12-CSN4_N109 → 109.4 → 109.4.1
123e5gjr333:342-420PCI101 → 101.1 → 101.1.2
134e5gjr414:2-316RPN6_N109 → 109.4 → 109.4.1
144e5gjr424:314-393PCI101 → 101.1 → 101.1.2
154e5gjr434:393-422RPN6_C_helix3749 → 3749.3 → 3749.3.1
165e5gjr515:283-362PCI101 → 101.1 → 101.1.2
175e5gjr525:363-389RPN7_PSMD6_C3749 → 3749.4 → 3749.4.1
185e5gjr535:14-282RPN7109 → 109.4 → 109.4.1
196e5gjr616:464-496Rpn3_C3749 → 3749.5 → 3749.5.1
206e5gjr626:57-116,6:160-394TPR_PSMD3_N109 → 109.4 → 109.4.1
216e5gjr636:394-463PCI101 → 101.1 → 101.1.2
227e5gjr717:89-265CSN8_PSD8_EIF3K109 → 109.4 → 109.4.1
237e5gjr727:266-350CSN8_PSD8_EIF3K101 → 101.1 → 101.1.2
248e5gjr818:185-295MitMem_reg3748 → 3748.1 → 3748.1.1
258e5gjr828:4-184JAB2492 → 2492.1 → 2492.1.1
269e5gjr919:28-209JAB2492 → 2492.1 → 2492.1.1
279e5gjr929:210-310RPN11_C3748 → 3748.1 → 3748.1.1
28ae5gjra1a:1-202Proteasome210 → 210.1 → 210.1.1
29AAe5gjrAA1AA:1-193VWA_22006 → 2006.1 → 2006.1.6
30ACe5gjrAC2AC:350-618,AC:653-827PC_rep109 → 109.35 → 109.35.1
31ACe5gjrAC3AC:106-356RPN1_RPN2_N109 → 109.34 → 109.34.1
32be5gjrb1b:1-220Proteasome,Pr_beta_C210 → 210.1 → 210.1.1
33Be5gjrB1B:2-245Proteasome,Proteasome_A_N210 → 210.1 → 210.1.1
34ce5gjrc1c:2-205Proteasome210 → 210.1 → 210.1.1
35Ce5gjrC1C:1-231Proteasome,Proteasome_A_N210 → 210.1 → 210.1.1
36de5gjrd1d:1-199Proteasome210 → 210.1 → 210.1.1
37De5gjrD1D:2-251Proteasome,Proteasome_A_N210 → 210.1 → 210.1.1
38ee5gjre1e:1-201Proteasome210 → 210.1 → 210.1.1
39Ee5gjrE1E:2-244Proteasome,Proteasome_A_N210 → 210.1 → 210.1.1
40fe5gjrf1f:1-213Proteasome210 → 210.1 → 210.1.1
41Fe5gjrF1F:8-241Proteasome,Proteasome_A_N210 → 210.1 → 210.1.1
42ge5gjrg1g:1-216Proteasome210 → 210.1 → 210.1.1
43Ge5gjrG1G:4-241Proteasome,Proteasome_A_N210 → 210.1 → 210.1.1
44he5gjrh1h:2-245Proteasome,Proteasome_A_N210 → 210.1 → 210.1.1
45He5gjrH2H:327-433AAA_lid_3148 → 148.1 → 148.1.3
46He5gjrH3H:140-326AAA2004 → 2004.1 → 2004.1.1
47ie5gjri1i:1-231Proteasome,Proteasome_A_N210 → 210.1 → 210.1.1
48Ie5gjrI1I:65-166Prot_ATP_ID_OB_C2 → 2.1 → 2.1.1
49Ie5gjrI2I:355-429AAA_lid_3148 → 148.1 → 148.1.3
50Ie5gjrI3I:167-354AAA, DUF8152004 → 2004.1 → 2004.1.1
51je5gjrj1j:2-251Proteasome,Proteasome_A_N210 → 210.1 → 210.1.1
52Je5gjrJ1J:130-319AAA2004 → 2004.1 → 2004.1.1
53Je5gjrJ2J:68-129Prot_ATP_ID_OB_C2 → 2.1 → 2.1.1
54Je5gjrJ3J:320-397AAA_lid_3148 → 148.1 → 148.1.3
55ke5gjrk1k:2-244Proteasome,Proteasome_A_N210 → 210.1 → 210.1.1
56Ke5gjrK1K:84-145Prot_ATP_ID_OB_C2 → 2.1 → 2.1.1
57Ke5gjrK2K:336-418AAA_lid_3148 → 148.1 → 148.1.3
58Ke5gjrK3K:146-335AAA2004 → 2004.1 → 2004.1.1
59le5gjrl1l:8-241Proteasome,Proteasome_A_N210 → 210.1 → 210.1.1
60Le5gjrL1L:304-389AAA_lid_3148 → 148.1 → 148.1.3
61Le5gjrL2L:115-304AAA2004 → 2004.1 → 2004.1.1
62Le5gjrL3L:15-114Prot_ATP_ID_OB_C2 → 2.1 → 2.1.1
63me5gjrm1m:4-241Proteasome,Proteasome_A_N210 → 210.1 → 210.1.1
64Me5gjrM1M:167-356AAA2004 → 2004.1 → 2004.1.1
65Me5gjrM2M:357-420AAA_lid_3148 → 148.1 → 148.1.3
66Me5gjrM3M:85-166Prot_ATP_ID_OB_C2 → 2.1 → 2.1.1
67Me5gjrM4M:421-439148.1.3.0148 → 148.1 → 148.1.3
68ne5gjrn1n:3-245Proteasome,Proteasome_A_N210 → 210.1 → 210.1.1
69Ne5gjrN1N:346-784PC_rep, HEAT_2109 → 109.35 → 109.35.1
70Ne5gjrN2N:3-272,N:321-345RPN2_N109 → 109.34 → 109.34.1
71Ne5gjrN3N:785-816,N:878-939RPN2_C3792 → 3792.1 → 3792.1.1
72oe5gjro1o:1-202Proteasome210 → 210.1 → 210.1.1
73Oe5gjrO1O:340-3763749.1.1.03749 → 3749.1 → 3749.1.1
74Oe5gjrO2O:3-259PSD13_N109 → 109.4 → 109.4.1
75Oe5gjrO3O:260-339PCI101 → 101.1 → 101.1.2
76pe5gjrp1p:1-220Proteasome,Pr_beta_C210 → 210.1 → 210.1.1
77Pe5gjrP1P:5-341PSMD12-CSN4_N109 → 109.4 → 109.4.1
78Pe5gjrP2P:342-420PCI101 → 101.1 → 101.1.2
79Pe5gjrP3P:421-454RPN5_C3749 → 3749.2 → 3749.2.1
80qe5gjrq1q:2-205Proteasome210 → 210.1 → 210.1.1
81Qe5gjrQ1Q:393-422RPN6_C_helix3749 → 3749.3 → 3749.3.1
82Qe5gjrQ2Q:314-393PCI101 → 101.1 → 101.1.2
83Qe5gjrQ3Q:2-316RPN6_N109 → 109.4 → 109.4.1
84re5gjrr1r:1-199Proteasome210 → 210.1 → 210.1.1
85Re5gjrR1R:283-362PCI101 → 101.1 → 101.1.2
86Re5gjrR2R:14-282RPN7109 → 109.4 → 109.4.1
87Re5gjrR3R:363-389RPN7_PSMD6_C3749 → 3749.4 → 3749.4.1
88se5gjrs1s:1-201Proteasome210 → 210.1 → 210.1.1
89Se5gjrS1S:394-463PCI101 → 101.1 → 101.1.2
90Se5gjrS2S:464-496Rpn3_C3749 → 3749.5 → 3749.5.1
91Se5gjrS3S:57-116,S:160-394TPR_PSMD3_N109 → 109.4 → 109.4.1
92te5gjrt1t:1-213Proteasome210 → 210.1 → 210.1.1
93Te5gjrT1T:266-350CSN8_PSD8_EIF3K101 → 101.1 → 101.1.2
94Te5gjrT2T:89-265CSN8_PSD8_EIF3K109 → 109.4 → 109.4.1
95ue5gjru1u:1-217Proteasome210 → 210.1 → 210.1.1
96Ue5gjrU1U:4-184JAB2492 → 2492.1 → 2492.1.1
97Ue5gjrU2U:185-295MitMem_reg3748 → 3748.1 → 3748.1.1
98ve5gjrv2v:140-326AAA2004 → 2004.1 → 2004.1.1
99ve5gjrv3v:327-433AAA_lid_3148 → 148.1 → 148.1.3
100Ve5gjrV1V:210-310RPN11_C3748 → 3748.1 → 3748.1.1
101Ve5gjrV2V:28-209JAB2492 → 2492.1 → 2492.1.1
102we5gjrw1w:65-166Prot_ATP_ID_OB_C2 → 2.1 → 2.1.1
103we5gjrw2w:167-354AAA, DUF8152004 → 2004.1 → 2004.1.1
104we5gjrw3w:355-429AAA_lid_3148 → 148.1 → 148.1.3
105We5gjrW1W:1-193VWA_22006 → 2006.1 → 2006.1.6
106xe5gjrx1x:130-319AAA2004 → 2004.1 → 2004.1.1
107xe5gjrx2x:320-397AAA_lid_3148 → 148.1 → 148.1.3
108xe5gjrx3x:68-129Prot_ATP_ID_OB_C2 → 2.1 → 2.1.1
109Xe5gjrX1X:3-245Proteasome,Proteasome_A_N210 → 210.1 → 210.1.1
110ye5gjry1y:146-335AAA2004 → 2004.1 → 2004.1.1
111ye5gjry2y:336-418AAA_lid_3148 → 148.1 → 148.1.3
112ye5gjry3y:84-145Prot_ATP_ID_OB_C2 → 2.1 → 2.1.1
113ze5gjrz1z:15-114Prot_ATP_ID_OB_C2 → 2.1 → 2.1.1
114ze5gjrz2z:304-389AAA_lid_3148 → 148.1 → 148.1.3
115ze5gjrz3z:115-304AAA2004 → 2004.1 → 2004.1.1
116Ze5gjrZ1Z:106-356RPN1_RPN2_N109 → 109.34 → 109.34.1
117Ze5gjrZ3Z:350-618,Z:653-827PC_rep109 → 109.35 → 109.35.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors