PDB 5GKZ
ELECTRON MICROSCOPY0 chains56 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Aview chain
13 domainse5gkzA1(A:4068-4131)e5gkzA2(A:206-394)e5gkzA3(A:1243-1297,A:1432-1654)e5gkzA4(A:394-632)e5gkzA5(A:4545-4583,A:4628-4742,A:4765-5033)e5gkzA6(A:1070-1246)e5gkzA7(A:633-849)e5gkzA8(A:2145-2386,A:2419-2562)e5gkzA9(A:3645-3852,A:3877-4064)e5gkzA10(A:2734-2940)e5gkzA11(A:12-209)e5gkzA12(A:1655-1869,A:1925-1976,A:2033-2072,A:2093-2144)e5gkzA13(A:850-1055)
Chain Bview chain
1 domainChain Cview chain
13 domainse5gkzC1(C:1070-1246)e5gkzC2(C:4545-4583,C:4628-4742,C:4765-5033)e5gkzC3(C:3645-3852,C:3877-4064)e5gkzC4(C:4068-4131)e5gkzC5(C:206-394)e5gkzC6(C:633-849)e5gkzC7(C:394-632)e5gkzC8(C:2734-2940)e5gkzC9(C:850-1055)e5gkzC10(C:1655-1869,C:1925-1976,C:2033-2072,C:2093-2144)e5gkzC11(C:2145-2386,C:2419-2562)e5gkzC12(C:12-209)e5gkzC13(C:1243-1297,C:1432-1654)
Chain Dview chain
1 domainChain Eview chain
13 domainse5gkzE1(E:1655-1869,E:1925-1976,E:2033-2072,E:2093-2144)e5gkzE2(E:2145-2386,E:2419-2562)e5gkzE3(E:1070-1246)e5gkzE4(E:633-849)e5gkzE5(E:394-632)e5gkzE6(E:3645-3852,E:3877-4064)e5gkzE7(E:12-209)e5gkzE8(E:850-1055)e5gkzE9(E:4068-4131)e5gkzE10(E:1243-1297,E:1432-1654)e5gkzE11(E:2734-2940)e5gkzE12(E:206-394)e5gkzE13(E:4545-4583,E:4628-4742,E:4765-5033)
Chain Fview chain
1 domainChain Gview chain
13 domainse5gkzG1(G:4545-4583,G:4628-4742,G:4765-5033)e5gkzG2(G:12-209)e5gkzG3(G:850-1055)e5gkzG4(G:394-632)e5gkzG5(G:1655-1869,G:1925-1976,G:2033-2072,G:2093-2144)e5gkzG6(G:633-849)e5gkzG7(G:1243-1297,G:1432-1654)e5gkzG8(G:1070-1246)e5gkzG9(G:2145-2386,G:2419-2562)e5gkzG10(G:4068-4131)e5gkzG11(G:3645-3852,G:3877-4064)e5gkzG12(G:206-394)e5gkzG13(G:2734-2940)
Chain Hview chain
1 domainAll Domains (56)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e5gkzA1 | A:4068-4131 | EF-hand_7 | 108 → 108.1 → 108.1.1 |
| 2 | A | e5gkzA2 | A:206-394 | MIR | 6 → 6.1 → 6.1.1 |
| 3 | A | e5gkzA3 | A:1243-1297,A:1432-1654 | SPRY | 10 → 10.1 → 10.1.1 |
| 4 | A | e5gkzA4 | A:394-632 | RYDR_ITPR | 109 → 109.4 → 109.4.1 |
| 5 | A | e5gkzA5 | A:4545-4583,A:4628-4742,A:4765-5033 | Ion_trans,RR_TM4-6 | 5054 → 5054.1 → 5054.1.1 |
| 6 | A | e5gkzA6 | A:1070-1246 | SPRY | 10 → 10.1 → 10.1.1 |
| 7 | A | e5gkzA7 | A:633-849 | SPRY | 10 → 10.1 → 10.1.1 |
| 8 | A | e5gkzA8 | A:2145-2386,A:2419-2562 | RYDR_ITPR | 109 → 109.4 → 109.4.1 |
| 9 | A | e5gkzA9 | A:3645-3852,A:3877-4064 | RIH_assoc | 109 → 109.4 → 109.4.1 |
| 10 | A | e5gkzA10 | A:2734-2940 | RyR | 3191 → 3191.1 → 3191.1.1 |
| 11 | A | e5gkzA11 | A:12-209 | Ins145_P3_rec | 6 → 6.1 → 6.1.1 |
| 12 | A | e5gkzA12 | A:1655-1869,A:1925-1976,A:2033-2072,A:2093-2144 | RYDR_Jsol | 109 → 109.4 → 109.4.1 |
| 13 | A | e5gkzA13 | A:850-1055 | RyR | 3191 → 3191.1 → 3191.1.1 |
| 14 | B | e5gkzB1 | B:1-107 | FKBP_C | 284 → 284.1 → 284.1.1 |
| 15 | C | e5gkzC1 | C:1070-1246 | SPRY | 10 → 10.1 → 10.1.1 |
| 16 | C | e5gkzC2 | C:4545-4583,C:4628-4742,C:4765-5033 | Ion_trans,RR_TM4-6 | 5054 → 5054.1 → 5054.1.1 |
| 17 | C | e5gkzC3 | C:3645-3852,C:3877-4064 | RIH_assoc | 109 → 109.4 → 109.4.1 |
| 18 | C | e5gkzC4 | C:4068-4131 | EF-hand_7 | 108 → 108.1 → 108.1.1 |
| 19 | C | e5gkzC5 | C:206-394 | MIR | 6 → 6.1 → 6.1.1 |
| 20 | C | e5gkzC6 | C:633-849 | SPRY | 10 → 10.1 → 10.1.1 |
| 21 | C | e5gkzC7 | C:394-632 | RYDR_ITPR | 109 → 109.4 → 109.4.1 |
| 22 | C | e5gkzC8 | C:2734-2940 | RyR | 3191 → 3191.1 → 3191.1.1 |
| 23 | C | e5gkzC9 | C:850-1055 | RyR | 3191 → 3191.1 → 3191.1.1 |
| 24 | C | e5gkzC10 | C:1655-1869,C:1925-1976,C:2033-2072,C:2093-2144 | RYDR_Jsol | 109 → 109.4 → 109.4.1 |
| 25 | C | e5gkzC11 | C:2145-2386,C:2419-2562 | RYDR_ITPR | 109 → 109.4 → 109.4.1 |
| 26 | C | e5gkzC12 | C:12-209 | Ins145_P3_rec | 6 → 6.1 → 6.1.1 |
| 27 | C | e5gkzC13 | C:1243-1297,C:1432-1654 | SPRY | 10 → 10.1 → 10.1.1 |
| 28 | D | e5gkzD1 | D:1-107 | FKBP_C | 284 → 284.1 → 284.1.1 |
| 29 | E | e5gkzE1 | E:1655-1869,E:1925-1976,E:2033-2072,E:2093-2144 | RYDR_Jsol | 109 → 109.4 → 109.4.1 |
| 30 | E | e5gkzE2 | E:2145-2386,E:2419-2562 | RYDR_ITPR | 109 → 109.4 → 109.4.1 |
| 31 | E | e5gkzE3 | E:1070-1246 | SPRY | 10 → 10.1 → 10.1.1 |
| 32 | E | e5gkzE4 | E:633-849 | SPRY | 10 → 10.1 → 10.1.1 |
| 33 | E | e5gkzE5 | E:394-632 | RYDR_ITPR | 109 → 109.4 → 109.4.1 |
| 34 | E | e5gkzE6 | E:3645-3852,E:3877-4064 | RIH_assoc | 109 → 109.4 → 109.4.1 |
| 35 | E | e5gkzE7 | E:12-209 | Ins145_P3_rec | 6 → 6.1 → 6.1.1 |
| 36 | E | e5gkzE8 | E:850-1055 | RyR | 3191 → 3191.1 → 3191.1.1 |
| 37 | E | e5gkzE9 | E:4068-4131 | EF-hand_7 | 108 → 108.1 → 108.1.1 |
| 38 | E | e5gkzE10 | E:1243-1297,E:1432-1654 | SPRY | 10 → 10.1 → 10.1.1 |
| 39 | E | e5gkzE11 | E:2734-2940 | RyR | 3191 → 3191.1 → 3191.1.1 |
| 40 | E | e5gkzE12 | E:206-394 | MIR | 6 → 6.1 → 6.1.1 |
| 41 | E | e5gkzE13 | E:4545-4583,E:4628-4742,E:4765-5033 | Ion_trans,RR_TM4-6 | 5054 → 5054.1 → 5054.1.1 |
| 42 | F | e5gkzF1 | F:1-107 | FKBP_C | 284 → 284.1 → 284.1.1 |
| 43 | G | e5gkzG1 | G:4545-4583,G:4628-4742,G:4765-5033 | Ion_trans,RR_TM4-6 | 5054 → 5054.1 → 5054.1.1 |
| 44 | G | e5gkzG2 | G:12-209 | Ins145_P3_rec | 6 → 6.1 → 6.1.1 |
| 45 | G | e5gkzG3 | G:850-1055 | RyR | 3191 → 3191.1 → 3191.1.1 |
| 46 | G | e5gkzG4 | G:394-632 | RYDR_ITPR | 109 → 109.4 → 109.4.1 |
| 47 | G | e5gkzG5 | G:1655-1869,G:1925-1976,G:2033-2072,G:2093-2144 | RYDR_Jsol | 109 → 109.4 → 109.4.1 |
| 48 | G | e5gkzG6 | G:633-849 | SPRY | 10 → 10.1 → 10.1.1 |
| 49 | G | e5gkzG7 | G:1243-1297,G:1432-1654 | SPRY | 10 → 10.1 → 10.1.1 |
| 50 | G | e5gkzG8 | G:1070-1246 | SPRY | 10 → 10.1 → 10.1.1 |
| 51 | G | e5gkzG9 | G:2145-2386,G:2419-2562 | RYDR_ITPR | 109 → 109.4 → 109.4.1 |
| 52 | G | e5gkzG10 | G:4068-4131 | EF-hand_7 | 108 → 108.1 → 108.1.1 |
| 53 | G | e5gkzG11 | G:3645-3852,G:3877-4064 | RIH_assoc | 109 → 109.4 → 109.4.1 |
| 54 | G | e5gkzG12 | G:206-394 | MIR | 6 → 6.1 → 6.1.1 |
| 55 | G | e5gkzG13 | G:2734-2940 | RyR | 3191 → 3191.1 → 3191.1.1 |
| 56 | H | e5gkzH1 | H:1-107 | FKBP_C | 284 → 284.1 → 284.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors