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PDB 5GM6

ELECTRON MICROSCOPY0 chains73 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

All Domains (73)

#ChainDomain IDRangeFamilyClassification
1ae5gm6a1a:172-259zf-C3HC4_2376 → 376.1 → 376.1.1
2ae5gm6a2a:126-171zf-CCCH906 → 906.1 → 906.1.1
3Ae5gm6A1A:1829-2085PRP8_domainIV2484 → 2484.1 → 2484.1.1
4Ae5gm6A2A:2149-2413PROCT2492 → 2492.1 → 2492.1.1
5Ae5gm6A3A:127-431,A:451-883PRO8NT,PROCN1038 → 1038.1 → 1038.1.1
6Ae5gm6A4A:884-1255RRM_4304 → 304.48 → 304.48.1
7Ae5gm6A5A:1256-1574U6-snRNA_bdg,U5_2-snRNA_bdg4967 → 4967.1 → 4967.1.1
8Ae5gm6A6A:1575-1828U6-snRNA_bdg2008 → 2008.1 → 2008.1.1
9be5gm6b1b:4-170Pro_isomerase75 → 75.1 → 75.1.1
10Be5gm6B1B:420-700DEAD2004 → 2004.1 → 2004.1.1
11Be5gm6B2B:1341-1541DEAD2004 → 2004.1 → 2004.1.1
12Be5gm6B3B:701-907Helicase_C2004 → 2004.1 → 2004.1.1
13Be5gm6B4B:1542-17412004.1.1.02004 → 2004.1 → 2004.1.1
14Be5gm6B6B:1199-1340Sec6311 → 11.1 → 11.1.1
15Be5gm6B7B:1004-1142Sec634156 → 4156.1 → 4156.1.1
16Be5gm6B8B:907-1003SNRNP200_wHTH101 → 101.1 → 101.1.2
17Be5gm6B9B:2049-2163Sec6311 → 11.1 → 11.1.1
18Be5gm6B11B:113-192BRR2_plug592 → 592.6 → 592.6.1
19Be5gm6B12B:1142-1199102.5.1.0102 → 102.5 → 102.5.1
20Be5gm6B13B:1989-2049102.5.1.0102 → 102.5 → 102.5.1
21Be5gm6B5B:1825-1989Sec634156 → 4156.1 → 4156.1.1
22Be5gm6B10B:1740-1824SNRNP200_wHTH101 → 101.1 → 101.1.2
23ce5gm6c1c:9-59Myb_DNA-binding101 → 101.1 → 101.1.1
24ce5gm6c2c:60-111Myb_DNA-binding101 → 101.1 → 101.1.1
25Ce5gm6C1C:118-456GTP_EFTU2004 → 2004.1 → 2004.1.1
26Ce5gm6C2C:677-857EFG_IV212 → 212.1 → 212.1.1
27Ce5gm6C3C:588-676304.24.1.0304 → 304.24 → 304.24.1
28Ce5gm6C4C:858-975EFG_C304 → 304.24 → 304.24.1
29Ce5gm6C5C:457-510,C:530-5871.1.7.01 → 1.1 → 1.1.7
30de5gm6d1d:40-275,d:295-297HAT, HAT_Syf1_CNRKL1_N109 → 109.4 → 109.4.1
31ee5gm6e1e:9-94RRM_1304 → 304.9 → 304.9.1
32ee5gm6e2e:96-182RRM_1304 → 304.9 → 304.9.1
33Fe5gm6F1F:56-299,F:324-451,F:472-483MMS1_N5 → 5.1 → 5.1.4
34Fe5gm6F2F:852-890,F:918-1231CPSF_A5 → 5.1 → 5.1.4
35Fe5gm6F3F:1232-1261,F:1298-1361CPSF_A101 → 101.1 → 101.1.1
36Fe5gm6F4F:452-784,F:815-851Beta-prop_RSE1_2nd5 → 5.1 → 5.1.4
37ge5gm6g1g:15-108LSM4 → 4.1 → 4.1.1
38Ge5gm6G1G:16-74,G:156-971PPP2R1A-like_HEAT109 → 109.4 → 109.4.1
39he5gm6h1h:12-83LSM4 → 4.1 → 4.1.1
40ie5gm6i1i:10-92LSM4 → 4.1 → 4.1.1
41Ie5gm6I1I:1-105zf-met386 → 386.1 → 386.1.1
42je5gm6j1j:2-76LSM4 → 4.1 → 4.1.1
43Je5gm6J1J:2-18,J:42-54,J:82-104PHF5377 → 377.1 → 377.1.1
44Je5gm6J2J:28-43,J:71-83377.1.1.0377 → 377.1 → 377.1.1
45Je5gm6J3J:21-27,J:55-70377.1.1.0377 → 377.1 → 377.1.1
46ke5gm6k1k:4-55,k:75-102LSM4 → 4.1 → 4.1.1
47Ke5gm6K1K:1-84SF3b101106 → 1106.1 → 1106.1.1
48le5gm6l1l:4-85LSM4 → 4.1 → 4.1.1
49me5gm6m1m:1-48,m:76-109LSM4 → 4.1 → 4.1.1
50ne5gm6n1n:151-455WD405 → 5.1 → 5.1.4
51oe5gm6o1o:1-61U-box376 → 376.1 → 376.1.1
52oe5gm6o2o:144-4935.1.5.05 → 5.1 → 5.1.5
53Oe5gm6O1O:111-447WD40, Beta-prop_NOL10_N5 → 5.1 → 5.1.4
54pe5gm6p1p:1-61U-box376 → 376.1 → 376.1.1
55pe5gm6p2p:144-4935.1.5.05 → 5.1 → 5.1.5
56qe5gm6q1q:1-61U-box376 → 376.1 → 376.1.1
57qe5gm6q2q:144-4935.1.5.05 → 5.1 → 5.1.5
58Qe5gm6Q1Q:3-126STL11_N376 → 376.1 → 376.1.3
59Qe5gm6Q2Q:202-264,Q:288-296304.9.1.0304 → 304.9 → 304.9.1
60re5gm6r1r:1-51U-box376 → 376.1 → 376.1.1
61Re5gm6R1R:130-227RRM_1304 → 304.9 → 304.9.1
62Re5gm6R2R:1-129Torus906 → 906.1 → 906.1.1
63Te5gm6T1T:1-157BUD313952 → 3952.1 → 3952.1.1
64Ue5gm6U1U:22-206FHA73 → 73.1 → 73.1.1
65ve5gm6v1v:551-753HAT_Syf1_CNRKL1_C109 → 109.4 → 109.4.1
66Ve5gm6V1V:2-129RRM_1304 → 304.9 → 304.9.1
67Xe5gm6X1X:60-111cwf216026 → 6026.1 → 6026.1.1
68Ye5gm6Y1Y:610-755HA2_N,HA2_C4156 → 4156.1 → 4156.1.1
69Ye5gm6Y2Y:402-574Helicase_C2004 → 2004.1 → 2004.1.1
70Ye5gm6Y3Y:210-401,Y:575-609DEAD2004 → 2004.1 → 2004.1.1
71Ye5gm6Y4Y:756-868OB_NTP_bind2 → 2.1 → 2.1.1
72Ze5gm6Z1Z:8-247109.4.1.0109 → 109.4 → 109.4.1
73Ze5gm6Z2Z:279-485MA3109 → 109.4 → 109.4.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors