Home/PDB

PDB 5GPN

ELECTRON MICROSCOPY0 chains92 ECOD domains
View in RCSB PDB

3D Structure(domains colored, ligands/nucleic acids shown)

Loading viewer...

Domains by Chain

All Domains (92)

#ChainDomain IDRangeFamilyClassification
10e5gpn010:1-261COX35039 → 5039.1 → 5039.1.1
21e5gpn111:4-147COX45003 → 5003.1 → 5003.1.1
32e5gpn212:1-109COX5A109 → 109.7 → 109.7.1
43e5gpn313:1-98COX5B375 → 375.1 → 375.1.8
54e5gpn414:1-84COX6A5004 → 5004.1 → 5004.1.1
65e5gpn515:11-85COX6B540 → 540.1 → 540.1.1
76e5gpn616:1-73COX6C5005 → 5005.1 → 5005.1.1
87e5gpn717:1-56COX7a5006 → 5006.1 → 5006.1.1
98e5gpn818:6-54COX7B5007 → 5007.1 → 5007.1.1
109e5gpn919:1-47COX7C5008 → 5008.1 → 5008.1.1
11ae5gpna1a:61-207Oxidored_q62007 → 2007.1 → 2007.1.3
12Ae5gpnA1A:234-446Peptidase_M16_C309 → 309.1 → 309.1.1
13Ae5gpnA2A:1-233Peptidase_M16,Peptidase_M16_C309 → 309.1 → 309.1.1
14Aae5gpnAa1Aa:74-154PP-binding132 → 132.1 → 132.1.1
15Ace5gpnAc1Ac:1-55MWFE1126 → 1126.1 → 1126.1.1
16Aee5gpnAe1Ae:11-98ETC_C1_NDUFA56004 → 6004.1 → 6004.1.1
17Afe5gpnAf1Af:24-113Complex1_LYR1128 → 1128.1 → 1128.1.1
18Aie5gpnAi1Ai:52-189NDUF_B51127 → 1127.1 → 1127.1.1
19Aje5gpnAj1Aj:29-161NDUFB101130 → 1130.1 → 1130.1.1
20Ake5gpnAk1Ak:10-160Complex1_LYR1128 → 1128.1 → 1128.1.1
21Ale5gpnAl1Al:5-100NDUF_C21131 → 1131.1 → 1131.1.1
22Ame5gpnAm1Am:46-72NADH_dh_m_C11124 → 1124.1 → 1124.1.1
23Ane5gpnAn1An:4-172CHCH568 → 568.1 → 568.1.1
24be5gpnb1b:64-212Fer4+Fer4_7205 → 205.1 → 205.1.1
25Be5gpnB1B:21-235Peptidase_M16309 → 309.1 → 309.1.1
26Be5gpnB2B:236-439Peptidase_M16_C309 → 309.1 → 309.1.1
27ce5gpnc1c:47-273Complex1_51K4335 → 4335.1 → 4335.1.1
28ce5gpnc2c:274-359SLBB_2221 → 221.1 → 221.1.4
29ce5gpnc3c:360-456NADH_4Fe-4S633 → 633.11 → 633.11.1
30Ce5gpnC1C:261-379Cytochrom_B_C5068 → 5068.1 → 5068.1.1
31Ce5gpnC2C:1-260Cytochrome_B, Cytochrom_B_N_25069 → 5069.1 → 5069.1.1
32de5gpnd1d:127-2162Fe-2S_thioredx2485 → 2485.1 → 2485.1.1
33de5gpnd2d:48-1262Fe-2S_thioredx3697 → 3697.1 → 3697.1.1
34De5gpnD1D:196-2415013.1.1.05013 → 5013.1 → 5013.1.1
35De5gpnD2D:1-195Cytochrom_C1107 → 107.1 → 107.1.1
36ee5gpne1e:1-315NADHdh3281 → 3281.1 → 3281.1.2
37Ee5gpnE1E:1-69UCR_TM5014 → 5014.1 → 5014.1.1
38Ee5gpnE2E:70-196Rieske66 → 66.1 → 66.1.1
39fe5gpnf1f:2-347Proton_antipo_M,NADH_dehy_S2_C3281 → 3281.1 → 3281.1.1
40Fe5gpnF1F:5-110UCR_14kD5070 → 5070.1 → 5070.1.1
41ge5gpng1g:4-109Oxidored_q43456 → 3456.1 → 3456.1.1
42Ge5gpnG1G:1-81UcrQ5016 → 5016.1 → 5016.1.1
43he5gpnh1h:2-458Proton_antipo_M,Oxidored_q5_N3281 → 3281.1 → 3281.1.1
44He5gpnH1H:15-78UCR_hinge5071 → 5071.1 → 5071.1.1
45ie5gpni1i:1-90Oxidored_q23843 → 3843.1 → 3843.1.1
46Ie5gpnI1I:46-78Ubiq-Cytc-red_N852 → 852.1 → 852.1.1
47je5gpnj1j:5-598Proton_antipo_M,Proton_antipo_N,NADH5_C3281 → 3281.1 → 3281.1.1
48Je5gpnJ1J:1-62UCR_UQCRX_QCR95017 → 5017.1 → 5017.1.1
49ke5gpnk1k:2-106,k:137-173Oxidored_q33579 → 3579.1 → 3579.1.1
50Ke5gpnK1K:2-44UCR_6-4kD5018 → 5018.1 → 5018.1.1
51le5gpnl1l:2-106,l:137-173Oxidored_q33579 → 3579.1 → 3579.1.1
52Le5gpnL1L:1-62UCR_UQCRX_QCR95017 → 5017.1 → 5017.1.1
53me5gpnm1m:4-56NADHdh_A31122 → 1122.1 → 1122.1.1
54Me5gpnM1M:1-233Peptidase_M16,Peptidase_M16_C309 → 309.1 → 309.1.1
55Me5gpnM2M:234-446Peptidase_M16_C309 → 309.1 → 309.1.1
56ne5gpnn1n:14-96L51_S25_CI-B82485 → 2485.1 → 2485.1.1
57Ne5gpnN1N:21-235Peptidase_M16309 → 309.1 → 309.1.1
58Ne5gpnN2N:236-439Peptidase_M16_C309 → 309.1 → 309.1.1
59oe5gpno1o:18-68Ndufs55071 → 5071.2 → 5071.2.1
60Oe5gpnO1O:261-379Cytochrom_B_C5068 → 5068.1 → 5068.1.1
61Oe5gpnO2O:1-260Cytochrome_B, Cytochrom_B_N_25069 → 5069.1 → 5069.1.1
62pe5gpnp1p:45-287,p:312-358Epimerase2003 → 2003.1 → 2003.1.1
63Pe5gpnP1P:1-195Cytochrom_C1107 → 107.1 → 107.1.1
64Pe5gpnP2P:196-2415013.1.1.05013 → 5013.1 → 5013.1.1
65qe5gpnq1q:61-256dNK2004 → 2004.1 → 2004.1.1
66Qe5gpnQ1Q:1-69UCR_TM5014 → 5014.1 → 5014.1.1
67Qe5gpnQ2Q:70-196Rieske66 → 66.1 → 66.1.1
68re5gpnr1r:30-92GRIM-196055 → 6055.1 → 6055.1.1
69Re5gpnR1R:5-110UCR_14kD5070 → 5070.1 → 5070.1.1
70se5gpns1s:1-43COX85009 → 5009.1 → 5009.1.1
71Se5gpnS1S:1-78UcrQ5016 → 5016.1 → 5016.1.1
72te5gpnt1t:74-154PP-binding132 → 132.1 → 132.1.1
73Te5gpnT1T:15-78UCR_hinge5071 → 5071.1 → 5071.1.1
74ue5gpnu1u:52-189NDUF_B51127 → 1127.1 → 1127.1.1
75Ue5gpnU1U:46-78Ubiq-Cytc-red_N852 → 852.1 → 852.1.1
76ve5gpnv1v:61-256dNK2004 → 2004.1 → 2004.1.1
77Ve5gpnV1V:9-45UCR_6-4kD5018 → 5018.1 → 5018.1.1
78we5gpnw1w:60-166NDUS43203 → 3203.1 → 3203.1.1
79We5gpnW1W:51-219Complex1_30kDa4272 → 4272.1 → 4272.1.1
80xe5gpnx1x:74-119zf-CHCC375 → 375.1 → 375.1.8
81ye5gpny1y:1-514COX15038 → 5038.1 → 5038.1.1
82Ye5gpnY1Y:105-159NADH-G_4Fe-4S_35100 → 5100.1 → 5100.1.1
83Ye5gpnY2Y:160-240Nqo3_Fer4205 → 205.1 → 205.1.1
84Ye5gpnY3Y:31-104Fer2_4221 → 221.1 → 221.1.1
85Ye5gpnY4Y:301-370,Y:519-716Molybdopterin,NADH_dhqG_C2003 → 2003.2 → 2003.2.1
86Ye5gpnY5Y:371-518Molybdopterin2003 → 2003.2 → 2003.2.1
87Ye5gpnY6Y:241-300NDSU1_4Fe-4S1001 → 1001.1 → 1001.1.1
88ze5gpnz1z:91-227COX23156 → 3156.1 → 3156.1.1
89ze5gpnz2z:1-90COX2_TM5040 → 5040.1 → 5040.1.1
90Ze5gpnZ1Z:162-359Complex1_49kDa4025 → 4025.1 → 4025.1.1
91Ze5gpnZ2Z:119-161,Z:360-432Complex1_49kDa244 → 244.4 → 244.4.1
92Ze5gpnZ3Z:89-118,Z:433-463Complex1_49kDa244 → 244.4 → 244.4.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors