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PDB 5HD1

X-RAY DIFFRACTION2.70 Å0 chains110 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

All Domains (110)

#ChainDomain IDRangeFamilyClassification
110e5hd110110:10-84Ribosomal_L27325 → 325.1 → 325.1.8
211e5hd111111:2-98Ribosomal_L284232 → 4232.1 → 4232.1.1
312e5hd112112:1-70Ribosomal_L29192 → 192.4 → 192.4.1
413e5hd113113:2-60Ribosomal_L30887 → 887.1 → 887.1.1
514e5hd114114:1-69Ribosomal_L314987 → 4987.1 → 4987.1.1
615e5hd115115:2-60Ribosomal_L32p375 → 375.1 → 375.1.1
716e5hd116116:2-54Ribosomal_L33375 → 375.1 → 375.1.1
817e5hd117117:1-48Ribosomal_L343074 → 3074.1 → 3074.1.1
918e5hd118118:2-65Ribosomal_L35p4281 → 4281.1 → 4281.1.1
1019e5hd119119:1-37Ribosomal_L36919 → 919.1 → 919.1.1
111be5hd11b11b:7-237Ribosomal_S22007 → 2007.6 → 2007.6.1
121ce5hd11c11c:107-207Ribosomal_S3_C230 → 230.2 → 230.2.1
131ce5hd11c21c:2-106KH_2327 → 327.11 → 327.11.1
141de5hd11d11d:2-209Ribosomal_S4,S4221 → 221.1 → 221.1.2
151De5hd11D11D:127-276Ribosomal_L2_C4 → 4.1 → 4.1.1
161De5hd11D21D:2-126Ribosomal_L22 → 2.1 → 2.1.1
171ee5hd11e11e:5-73Ribosomal_S5330 → 330.1 → 330.1.1
181ee5hd11e21e:74-152Ribosomal_S5_C212 → 212.1 → 212.1.1
191Ee5hd11E11E:1-204Ribosomal_L31 → 1.1 → 1.1.7
201fe5hd11f11f:1-100Ribosomal_S6304 → 304.12 → 304.12.1
211Fe5hd11F11F:6-208Ribosomal_L47559 → 7559.1 → 7559.1.1
221ge5hd11g11g:2-156Ribosomal_S7167 → 167.1 → 167.1.1
231Ge5hd11G11G:2-182Ribosomal_L5,Ribosomal_L5_C882 → 882.1 → 882.1.1
241he5hd11h11h:67-138Ribosomal_S84988 → 4988.1 → 4988.1.1
251he5hd11h21h:2-66Ribosomal_S8320 → 320.2 → 320.2.1
261He5hd11H11H:83-175Ribosomal_L6318 → 318.1 → 318.1.1
271He5hd11H21H:2-82Ribosomal_L6318 → 318.1 → 318.1.1
281ie5hd11i11i:2-128Ribosomal_S9212 → 212.1 → 212.1.1
291Ie5hd11I11I:1-53Ribosomal_L9_N4076 → 4076.1 → 4076.1.1
301Ie5hd11I21I:54-146Ribosomal_L9_C523 → 523.1 → 523.1.1
311je5hd11j11j:4-100Ribosomal_S10304 → 304.44 → 304.44.1
321ke5hd11k11k:13-126Ribosomal_S112484 → 2484.1 → 2484.1.1
331le5hd11l11l:5-126Ribosom_S12_S232 → 2.1 → 2.1.1
341me5hd11m11m:2-119Ribosomal_S13102 → 102.2 → 102.2.1
351ne5hd11n11n:2-61Ribosomal_S14377 → 377.1 → 377.1.1
361Ne5hd11N11N:1-140Ribosomal_L132490 → 2490.2 → 2490.2.1
371oe5hd11o11o:2-89Ribosomal_S15616 → 616.1 → 616.1.1
381Oe5hd11O11O:1-122Ribosomal_L143174 → 3174.1 → 3174.1.1
391pe5hd11p11p:1-82Ribosomal_S16837 → 837.1 → 837.1.1
401Pe5hd11P11P:1-149Ribosomal_L27A, PF294712490 → 2490.3 → 2490.3.1
411qe5hd11q11q:2-100Ribosomal_S172 → 2.1 → 2.1.1
421Qe5hd11Q11Q:1-141Ribosomal_L16325 → 325.1 → 325.1.5
431re5hd11r11r:20-87Ribosomal_S18101 → 101.1 → 101.1.1
441Re5hd11R11R:1-118Ribosomal_L17218 → 218.3 → 218.3.1
451se5hd11s11s:2-85Ribosomal_S19838 → 838.1 → 838.1.1
461Se5hd11S11S:3-112Ribosomal_L18p2484 → 2484.1 → 2484.1.1
471te5hd11t11t:8-103Ribosomal_S20p604 → 604.9 → 604.9.1
481Te5hd11T11T:1-131Ribosomal_L194 → 4.1 → 4.1.1
491Ue5hd11U11U:2-117Ribosomal_L20143 → 143.2 → 143.2.1
501Ve5hd11V11V:1-101Ribosomal_L21p4186 → 4186.1 → 4186.1.1
511We5hd11W11W:1-112Ribosomal_L22218 → 218.2 → 218.2.1
521Xe5hd11X11X:1-95Ribosomal_L23304 → 304.109 → 304.109.1
531Ye5hd11Y11Y:1-107KOW,ribosomal_L244 → 4.1 → 4.1.1
541Ze5hd11Z11Z:93-186Ribosomal_TL5_C240 → 240.1 → 240.1.1
551Ze5hd11Z21Z:1-92Ribosomal_L25p239 → 239.1 → 239.1.1
5620e5hd120120:10-84Ribosomal_L27325 → 325.1 → 325.1.8
5721e5hd121121:2-98Ribosomal_L284232 → 4232.1 → 4232.1.1
5822e5hd122122:1-70Ribosomal_L29192 → 192.4 → 192.4.1
5923e5hd123123:2-60Ribosomal_L30887 → 887.1 → 887.1.1
6024e5hd124124:1-69Ribosomal_L314987 → 4987.1 → 4987.1.1
6125e5hd125125:2-60Ribosomal_L32p375 → 375.1 → 375.1.1
6226e5hd126126:2-54Ribosomal_L33375 → 375.1 → 375.1.1
6327e5hd127127:1-48Ribosomal_L343074 → 3074.1 → 3074.1.1
6428e5hd128128:2-65Ribosomal_L35p4281 → 4281.1 → 4281.1.1
6529e5hd129129:1-37Ribosomal_L36919 → 919.1 → 919.1.1
662be5hd12b12b:7-237Ribosomal_S22007 → 2007.6 → 2007.6.1
672ce5hd12c12c:107-207Ribosomal_S3_C230 → 230.2 → 230.2.1
682ce5hd12c22c:2-106KH_2327 → 327.11 → 327.11.1
692de5hd12d12d:2-209Ribosomal_S4,S4221 → 221.1 → 221.1.2
702De5hd12D12D:127-276Ribosomal_L2_C4 → 4.1 → 4.1.1
712De5hd12D22D:2-126Ribosomal_L22 → 2.1 → 2.1.1
722ee5hd12e12e:5-73Ribosomal_S5330 → 330.1 → 330.1.1
732ee5hd12e22e:74-152Ribosomal_S5_C212 → 212.1 → 212.1.1
742Ee5hd12E12E:1-204Ribosomal_L31 → 1.1 → 1.1.7
752fe5hd12f12f:1-100Ribosomal_S6304 → 304.12 → 304.12.1
762Fe5hd12F12F:6-208Ribosomal_L47559 → 7559.1 → 7559.1.1
772ge5hd12g12g:2-156Ribosomal_S7167 → 167.1 → 167.1.1
782Ge5hd12G12G:2-182Ribosomal_L5,Ribosomal_L5_C882 → 882.1 → 882.1.1
792he5hd12h12h:67-138Ribosomal_S84988 → 4988.1 → 4988.1.1
802he5hd12h22h:2-66Ribosomal_S8320 → 320.2 → 320.2.1
812He5hd12H12H:83-175Ribosomal_L6318 → 318.1 → 318.1.1
822He5hd12H22H:2-82Ribosomal_L6318 → 318.1 → 318.1.1
832ie5hd12i12i:2-128Ribosomal_S9212 → 212.1 → 212.1.1
842Ie5hd12I12I:1-53Ribosomal_L9_N4076 → 4076.1 → 4076.1.1
852Ie5hd12I22I:54-146Ribosomal_L9_C523 → 523.1 → 523.1.1
862je5hd12j12j:5-100Ribosomal_S10304 → 304.44 → 304.44.1
872ke5hd12k12k:13-126Ribosomal_S112484 → 2484.1 → 2484.1.1
882le5hd12l12l:5-126Ribosom_S12_S232 → 2.1 → 2.1.1
892me5hd12m12m:3-118Ribosomal_S13102 → 102.2 → 102.2.1
902ne5hd12n12n:2-61Ribosomal_S14377 → 377.1 → 377.1.1
912Ne5hd12N12N:1-140Ribosomal_L132490 → 2490.2 → 2490.2.1
922oe5hd12o12o:2-89Ribosomal_S15616 → 616.1 → 616.1.1
932Oe5hd12O12O:1-122Ribosomal_L143174 → 3174.1 → 3174.1.1
942pe5hd12p12p:1-82Ribosomal_S16837 → 837.1 → 837.1.1
952Pe5hd12P12P:1-149Ribosomal_L27A, PF294712490 → 2490.3 → 2490.3.1
962qe5hd12q12q:2-100Ribosomal_S172 → 2.1 → 2.1.1
972Qe5hd12Q12Q:1-141Ribosomal_L16325 → 325.1 → 325.1.5
982re5hd12r12r:20-87Ribosomal_S18101 → 101.1 → 101.1.1
992Re5hd12R12R:1-118Ribosomal_L17218 → 218.3 → 218.3.1
1002se5hd12s12s:2-84Ribosomal_S19838 → 838.1 → 838.1.1
1012Se5hd12S12S:3-112Ribosomal_L18p2484 → 2484.1 → 2484.1.1
1022te5hd12t12t:8-103Ribosomal_S20p604 → 604.9 → 604.9.1
1032Te5hd12T12T:1-131Ribosomal_L194 → 4.1 → 4.1.1
1042Ue5hd12U12U:2-117Ribosomal_L20143 → 143.2 → 143.2.1
1052Ve5hd12V12V:1-101Ribosomal_L21p4186 → 4186.1 → 4186.1.1
1062We5hd12W12W:1-112Ribosomal_L22218 → 218.2 → 218.2.1
1072Xe5hd12X12X:1-95Ribosomal_L23304 → 304.109 → 304.109.1
1082Ye5hd12Y12Y:1-107KOW,ribosomal_L244 → 4.1 → 4.1.1
1092Ze5hd12Z12Z:93-186Ribosomal_TL5_C240 → 240.1 → 240.1.1
1102Ze5hd12Z22Z:1-92Ribosomal_L25p239 → 239.1 → 239.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors