Home/PDB

PDB 5IBB

X-RAY DIFFRACTION2.96 Å0 chains108 ECOD domains
View in RCSB PDB

3D Structure(domains colored, ligands/nucleic acids shown)

Loading viewer...

Domains by Chain

All Domains (108)

#ChainDomain IDRangeFamilyClassification
111e5ibb11111:127-274Ribosomal_L2_C4 → 4.1 → 4.1.1
211e5ibb11211:2-126Ribosomal_L22 → 2.1 → 2.1.1
312e5ibb12112:13-226Ribosomal_S22007 → 2007.6 → 2007.6.1
415e5ibb15115:1-138Ribosomal_L132490 → 2490.2 → 2490.2.1
519e5ibb19119:2-126Ribosomal_L22 → 2.1 → 2.1.1
619e5ibb19219:127-275Ribosomal_L2_C4 → 4.1 → 4.1.1
71Ae5ibb1A11A:11-95Ribosomal_S10304 → 304.44 → 304.44.1
81Ee5ibb1E11E:5-239Ribosomal_S22007 → 2007.6 → 2007.6.1
91Ie5ibb1I11I:7-101Ribosomal_S10304 → 304.44 → 304.44.1
1021e5ibb21121:1-203Ribosomal_L31 → 1.1 → 1.1.7
1122e5ibb22122:3-106KH_2327 → 327.11 → 327.11.1
1222e5ibb22222:107-204Ribosomal_S3_C230 → 230.2 → 230.2.1
1325e5ibb25125:1-122Ribosomal_L143174 → 3174.1 → 3174.1.1
1429e5ibb29129:1-204Ribosomal_L31 → 1.1 → 1.1.7
152Ae5ibb2A12A:14-126Ribosomal_S112484 → 2484.1 → 2484.1.1
162Ee5ibb2E12E:2-106KH_2327 → 327.11 → 327.11.1
172Ee5ibb2E22E:107-206Ribosomal_S3_C230 → 230.2 → 230.2.1
182Ie5ibb2I12I:16-126Ribosomal_S112484 → 2484.1 → 2484.1.1
1931e5ibb31131:6-207Ribosomal_L47559 → 7559.1 → 7559.1.1
2032e5ibb32132:2-209Ribosomal_S4,S4221 → 221.1 → 221.1.2
2135e5ibb35135:1-147Ribosomal_L27A, PF294712490 → 2490.3 → 2490.3.1
2239e5ibb39139:3-206Ribosomal_L47559 → 7559.1 → 7559.1.1
233Ae5ibb3A13A:5-126Ribosom_S12_S232 → 2.1 → 2.1.1
243Ee5ibb3E13E:3-209Ribosomal_S4,S4221 → 221.1 → 221.1.2
253Ie5ibb3I13I:5-126Ribosom_S12_S232 → 2.1 → 2.1.1
2641e5ibb41141:3-181Ribosomal_L5,Ribosomal_L5_C882 → 882.1 → 882.1.1
2742e5ibb42142:74-153Ribosomal_S5_C212 → 212.1 → 212.1.1
2842e5ibb42242:5-73Ribosomal_S5330 → 330.1 → 330.1.1
2945e5ibb45145:2-140Ribosomal_L16325 → 325.1 → 325.1.5
3049e5ibb49149:2-182Ribosomal_L5,Ribosomal_L5_C882 → 882.1 → 882.1.1
314Ae5ibb4A14A:8-118Ribosomal_S13102 → 102.2 → 102.2.1
324Ee5ibb4E14E:5-73Ribosomal_S5330 → 330.1 → 330.1.1
334Ee5ibb4E24E:74-153Ribosomal_S5_C212 → 212.1 → 212.1.1
344Ie5ibb4I14I:2-120Ribosomal_S13102 → 102.2 → 102.2.1
3551e5ibb51151:2-82Ribosomal_L6318 → 318.1 → 318.1.1
3651e5ibb51251:83-175Ribosomal_L6318 → 318.1 → 318.1.1
3752e5ibb52152:1-101Ribosomal_S6304 → 304.12 → 304.12.1
3855e5ibb55155:1-118Ribosomal_L17218 → 218.3 → 218.3.1
3958e5ibb58158:1-137Ribosomal_L132490 → 2490.2 → 2490.2.1
4059e5ibb59159:6-82Ribosomal_L6318 → 318.1 → 318.1.1
4159e5ibb59259:83-172Ribosomal_L6318 → 318.1 → 318.1.1
425Ae5ibb5A15A:3-61Ribosomal_S14377 → 377.1 → 377.1.1
435Ee5ibb5E15E:1-100Ribosomal_S6304 → 304.12 → 304.12.1
445Ie5ibb5I15I:2-61Ribosomal_S14377 → 377.1 → 377.1.1
4561e5ibb61161:54-146Ribosomal_L9_C523 → 523.1 → 523.1.1
4661e5ibb61261:1-53Ribosomal_L9_N4076 → 4076.1 → 4076.1.1
4762e5ibb62162:2-149Ribosomal_S7167 → 167.1 → 167.1.1
4865e5ibb65165:3-112Ribosomal_L18p2484 → 2484.1 → 2484.1.1
4968e5ibb68168:1-122Ribosomal_L143174 → 3174.1 → 3174.1.1
5069e5ibb69169:1-53Ribosomal_L9_N4076 → 4076.1 → 4076.1.1
5169e5ibb69269:54-145Ribosomal_L9_C523 → 523.1 → 523.1.1
526Ae5ibb6A16A:2-88Ribosomal_S15616 → 616.1 → 616.1.1
536Ee5ibb6E16E:2-155Ribosomal_S7167 → 167.1 → 167.1.1
546Ie5ibb6I16I:2-88Ribosomal_S15616 → 616.1 → 616.1.1
5571e5ibb71171:3-69,71:163-228Ribosomal_L1898 → 898.1 → 898.1.1
5672e5ibb72172:67-138Ribosomal_S84988 → 4988.1 → 4988.1.1
5772e5ibb72272:2-66Ribosomal_S8320 → 320.2 → 320.2.1
5875e5ibb75175:1-133Ribosomal_L194 → 4.1 → 4.1.1
5978e5ibb78178:1-147Ribosomal_L27A, PF294712490 → 2490.3 → 2490.3.1
6079e5ibb79179:5-57,79:165-224898.1.1.0898 → 898.1 → 898.1.1
617Ae5ibb7A17A:1-84Ribosomal_S16837 → 837.1 → 837.1.1
627Ee5ibb7E17E:67-138Ribosomal_S84988 → 4988.1 → 4988.1.1
637Ee5ibb7E27E:1-66Ribosomal_S8320 → 320.2 → 320.2.1
647Ie5ibb7I17I:1-83Ribosomal_S16837 → 837.1 → 837.1.1
6582e5ibb82182:5-125Ribosomal_S9212 → 212.1 → 212.1.1
6685e5ibb85185:2-117Ribosomal_L20143 → 143.2 → 143.2.1
6788e5ibb88188:1-141Ribosomal_L16325 → 325.1 → 325.1.5
688Ae5ibb8A18A:2-100Ribosomal_S172 → 2.1 → 2.1.1
698Ee5ibb8E18E:3-128Ribosomal_S9212 → 212.1 → 212.1.1
708Ie5ibb8I18I:2-101Ribosomal_S172 → 2.1 → 2.1.1
7195e5ibb95195:1-100Ribosomal_L21p4186 → 4186.1 → 4186.1.1
7298e5ibb98198:1-118Ribosomal_L17218 → 218.3 → 218.3.1
739Ae5ibb9A19A:20-86Ribosomal_S18101 → 101.1 → 101.1.1
749Ie5ibb9I19I:20-87Ribosomal_S18101 → 101.1 → 101.1.1
75A5e5ibbA51A5:1-111Ribosomal_L22218 → 218.2 → 218.2.1
76A8e5ibbA81A8:2-112Ribosomal_L18p2484 → 2484.1 → 2484.1.1
77AAe5ibbAA1AA:5-77Ribosomal_S19838 → 838.1 → 838.1.1
78AIe5ibbAI1AI:2-83Ribosomal_S19838 → 838.1 → 838.1.1
79B5e5ibbB51B5:1-94Ribosomal_L23304 → 304.109 → 304.109.1
80B8e5ibbB81B8:1-136Ribosomal_L194 → 4.1 → 4.1.1
81BAe5ibbBA1BA:8-106Ribosomal_S20p604 → 604.9 → 604.9.1
82BIe5ibbBI1BI:9-105Ribosomal_S20p604 → 604.9 → 604.9.1
83C5e5ibbC51C5:2-105KOW,ribosomal_L244 → 4.1 → 4.1.1
84C8e5ibbC81C8:2-116Ribosomal_L20143 → 143.2 → 143.2.1
85D5e5ibbD51D5:94-171Ribosomal_TL5_C240 → 240.1 → 240.1.1
86D5e5ibbD52D5:3-93Ribosomal_L25p239 → 239.1 → 239.1.1
87D8e5ibbD81D8:1-100Ribosomal_L21p4186 → 4186.1 → 4186.1.1
88E5e5ibbE51E5:8-83Ribosomal_L27325 → 325.1 → 325.1.8
89E8e5ibbE81E8:1-110Ribosomal_L22218 → 218.2 → 218.2.1
90F5e5ibbF51F5:2-95Ribosomal_L284232 → 4232.1 → 4232.1.1
91F8e5ibbF81F8:1-95Ribosomal_L23304 → 304.109 → 304.109.1
92G5e5ibbG51G5:2-70Ribosomal_L29192 → 192.4 → 192.4.1
93G8e5ibbG81G8:2-104KOW,ribosomal_L244 → 4.1 → 4.1.1
94H5e5ibbH51H5:2-59Ribosomal_L30887 → 887.1 → 887.1.1
95H8e5ibbH81H8:1-93Ribosomal_L25p239 → 239.1 → 239.1.1
96H8e5ibbH82H8:94-170Ribosomal_TL5_C240 → 240.1 → 240.1.1
97I5e5ibbI51I5:1-63Ribosomal_L314987 → 4987.1 → 4987.1.1
98I8e5ibbI81I8:8-84Ribosomal_L27325 → 325.1 → 325.1.8
99J5e5ibbJ51J5:2-57Ribosomal_L32p375 → 375.1 → 375.1.1
100J8e5ibbJ81J8:2-95Ribosomal_L284232 → 4232.1 → 4232.1.1
101K8e5ibbK81K8:2-69Ribosomal_L29192 → 192.4 → 192.4.1
102L5e5ibbL51L5:1-47Ribosomal_L343074 → 3074.1 → 3074.1.1
103L8e5ibbL81L8:2-59Ribosomal_L30887 → 887.1 → 887.1.1
104M5e5ibbM51M5:2-65Ribosomal_L35p4281 → 4281.1 → 4281.1.1
105M8e5ibbM81M8:1-64Ribosomal_L314987 → 4987.1 → 4987.1.1
106N8e5ibbN81N8:3-58Ribosomal_L32p375 → 375.1 → 375.1.1
107P8e5ibbP81P8:1-47Ribosomal_L343074 → 3074.1 → 3074.1.1
108Q8e5ibbQ81Q8:2-65Ribosomal_L35p4281 → 4281.1 → 4281.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors