PDB 5IKN
X-RAY DIFFRACTION4.80 Å0 chains36 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Aview chain
4 domainsChain Bview chain
4 domainsChain Cview chain
4 domainsChain Dview chain
3 domainsChain Eview chain
3 domainsChain Fview chain
3 domainsChain Gview chain
3 domainsChain Hview chain
3 domainsChain Iview chain
3 domainsChain Jview chain
3 domainsChain Kview chain
1 domainChain Lview chain
1 domainChain Mview chain
1 domainAll Domains (36)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e5iknA1 | A:463-490,A:614-704 | DNA_pol_A | 304 → 304.48 → 304.48.1 |
| 2 | A | e5iknA2 | A:491-613 | DNA_pol_A | 4964 → 4964.1 → 4964.1.1 |
| 3 | A | e5iknA3 | A:211-263,A:329-462 | DNA_pol_A | 4970 → 4970.1 → 4970.1.1 |
| 4 | A | e5iknA4 | A:1-210 | 2484.1.1.0 | 2484 → 2484.1 → 2484.1.1 |
| 5 | B | e5iknB1 | B:463-490,B:614-704 | DNA_pol_A | 304 → 304.48 → 304.48.1 |
| 6 | B | e5iknB2 | B:211-264,B:333-462 | DNA_pol_A | 4970 → 4970.1 → 4970.1.1 |
| 7 | B | e5iknB3 | B:1-210 | 2484.1.1.0 | 2484 → 2484.1 → 2484.1.1 |
| 8 | B | e5iknB4 | B:491-613 | DNA_pol_A | 4964 → 4964.1 → 4964.1.1 |
| 9 | C | e5iknC1 | C:491-613 | DNA_pol_A | 4964 → 4964.1 → 4964.1.1 |
| 10 | C | e5iknC2 | C:463-490,C:614-704 | DNA_pol_A | 304 → 304.48 → 304.48.1 |
| 11 | C | e5iknC3 | C:1-210 | 2484.1.1.0 | 2484 → 2484.1 → 2484.1.1 |
| 12 | C | e5iknC4 | C:211-263,C:335-462 | DNA_pol_A | 4970 → 4970.1 → 4970.1.1 |
| 13 | D | e5iknD1 | D:267-548 | DnaB_C | 2004 → 2004.1 → 2004.1.1 |
| 14 | D | e5iknD2 | D:136-266 | Toprim_2 | 2006 → 2006.1 → 2006.1.3 |
| 15 | D | e5iknD3 | D:64-135 | Helic-prim_T7_N | 4023 → 4023.1 → 4023.1.1 |
| 16 | E | e5iknE1 | E:136-262 | Toprim_2 | 2006 → 2006.1 → 2006.1.3 |
| 17 | E | e5iknE2 | E:64-135 | Helic-prim_T7_N | 4023 → 4023.1 → 4023.1.1 |
| 18 | E | e5iknE3 | E:263-548 | DnaB_C | 2004 → 2004.1 → 2004.1.1 |
| 19 | F | e5iknF1 | F:136-262 | Toprim_2 | 2006 → 2006.1 → 2006.1.3 |
| 20 | F | e5iknF2 | F:64-135 | Helic-prim_T7_N | 4023 → 4023.1 → 4023.1.1 |
| 21 | F | e5iknF3 | F:263-549 | DnaB_C | 2004 → 2004.1 → 2004.1.1 |
| 22 | G | e5iknG1 | G:265-547 | DnaB_C | 2004 → 2004.1 → 2004.1.1 |
| 23 | G | e5iknG2 | G:136-264 | Toprim_2 | 2006 → 2006.1 → 2006.1.3 |
| 24 | G | e5iknG3 | G:64-135 | Helic-prim_T7_N | 4023 → 4023.1 → 4023.1.1 |
| 25 | H | e5iknH1 | H:136-261 | Toprim_2 | 2006 → 2006.1 → 2006.1.3 |
| 26 | H | e5iknH2 | H:262-549 | DnaB_C | 2004 → 2004.1 → 2004.1.1 |
| 27 | H | e5iknH3 | H:64-135 | Helic-prim_T7_N | 4023 → 4023.1 → 4023.1.1 |
| 28 | I | e5iknI1 | I:64-135 | Helic-prim_T7_N | 4023 → 4023.1 → 4023.1.1 |
| 29 | I | e5iknI2 | I:261-541 | DnaB_C | 2004 → 2004.1 → 2004.1.1 |
| 30 | I | e5iknI3 | I:136-260 | Toprim_2 | 2006 → 2006.1 → 2006.1.3 |
| 31 | J | e5iknJ1 | J:64-135 | Helic-prim_T7_N | 4023 → 4023.1 → 4023.1.1 |
| 32 | J | e5iknJ2 | J:136-261 | Toprim_2 | 2006 → 2006.1 → 2006.1.3 |
| 33 | J | e5iknJ3 | J:262-546 | DnaB_C | 2004 → 2004.1 → 2004.1.1 |
| 34 | K | e5iknK1 | K:3-107 | Thioredoxin | 2485 → 2485.1 → 2485.1.1 |
| 35 | L | e5iknL1 | L:3-107 | Thioredoxin | 2485 → 2485.1 → 2485.1.1 |
| 36 | M | e5iknM1 | M:3-107 | Thioredoxin | 2485 → 2485.1 → 2485.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors