PDB 5J4D
X-RAY DIFFRACTION3.10 Å0 chains116 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain AAview chain
1 domainChain ABview chain
1 domainChain ACview chain
1 domainChain ADview chain
1 domainChain BAview chain
1 domainChain BBview chain
1 domainChain BCview chain
2 domainsChain BDview chain
1 domainChain CAview chain
1 domainChain CBview chain
1 domainChain CCview chain
1 domainChain CDview chain
1 domainChain DAview chain
1 domainChain DCview chain
1 domainChain DDview chain
1 domainChain Eview chain
2 domainsChain EAview chain
1 domainChain ECview chain
1 domainChain EDview chain
1 domainChain Fview chain
1 domainChain FAview chain
1 domainChain FCview chain
1 domainChain FDview chain
1 domainChain Gview chain
1 domainChain GAview chain
1 domainChain GCview chain
1 domainChain GDview chain
1 domainChain Hview chain
1 domainChain HCview chain
1 domainChain HDview chain
1 domainChain Iview chain
2 domainsChain ICview chain
1 domainChain Jview chain
2 domainsChain JBview chain
2 domainsChain JCview chain
1 domainChain Kview chain
1 domainChain KAview chain
1 domainChain KBview chain
1 domainChain KCview chain
1 domainChain Lview chain
1 domainChain LAview chain
2 domainsChain LBview chain
1 domainChain LCview chain
1 domainChain Mview chain
1 domainChain MAview chain
1 domainChain MBview chain
1 domainChain Nview chain
1 domainChain NAview chain
2 domainsChain NBview chain
2 domainsChain Oview chain
1 domainChain OAview chain
1 domainChain OBview chain
2 domainsChain Pview chain
1 domainChain PAview chain
1 domainChain PBview chain
1 domainChain PCview chain
1 domainChain Qview chain
1 domainChain QAview chain
2 domainsChain QBview chain
1 domainChain QCview chain
2 domainsChain Rview chain
1 domainChain RAview chain
1 domainChain RBview chain
1 domainChain RCview chain
1 domainChain Sview chain
1 domainChain SAview chain
1 domainChain SBview chain
1 domainChain SCview chain
2 domainsChain Tview chain
1 domainChain TAview chain
1 domainChain TBview chain
1 domainChain TCview chain
1 domainChain Uview chain
1 domainChain UAview chain
1 domainChain UBview chain
1 domainChain UCview chain
1 domainChain Vview chain
1 domainChain VAview chain
1 domainChain VBview chain
1 domainChain VCview chain
2 domainsChain Wview chain
2 domainsChain WAview chain
1 domainChain WBview chain
1 domainChain WCview chain
1 domainChain Xview chain
1 domainChain XAview chain
1 domainChain XBview chain
1 domainChain XCview chain
1 domainChain Yview chain
1 domainChain YAview chain
1 domainChain YBview chain
1 domainChain YCview chain
1 domainChain Zview chain
1 domainChain ZAview chain
1 domainChain ZBview chain
1 domainChain ZCview chain
1 domainAll Domains (116)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | AA | e5j4dAA1 | AA:1-60 | Ribosomal_L30 | 887 → 887.1 → 887.1.1 |
| 2 | AB | e5j4dAB1 | AB:19-88 | Ribosomal_S18 | 101 → 101.1 → 101.1.1 |
| 3 | AC | e5j4dAC1 | AC:1-107 | KOW,ribosomal_L24 | 4 → 4.1 → 4.1.1 |
| 4 | AD | e5j4dAD1 | AD:2-118 | Ribosomal_S13 | 102 → 102.2 → 102.2.1 |
| 5 | BA | e5j4dBA1 | BA:1-69 | Ribosomal_L31 | 4987 → 4987.1 → 4987.1.1 |
| 6 | BB | e5j4dBB1 | BB:2-84 | Ribosomal_S19 | 838 → 838.1 → 838.1.1 |
| 7 | BC | e5j4dBC1 | BC:1-92 | Ribosomal_L25p | 239 → 239.1 → 239.1.1 |
| 8 | BC | e5j4dBC2 | BC:93-189 | Ribosomal_TL5_C | 240 → 240.1 → 240.1.1 |
| 9 | BD | e5j4dBD1 | BD:2-61 | Ribosomal_S14 | 377 → 377.1 → 377.1.1 |
| 10 | CA | e5j4dCA1 | CA:2-60 | Ribosomal_L32p | 375 → 375.1 → 375.1.1 |
| 11 | CB | e5j4dCB1 | CB:8-106 | Ribosomal_S20p | 604 → 604.9 → 604.9.1 |
| 12 | CC | e5j4dCC1 | CC:2-85 | Ribosomal_L27 | 325 → 325.1 → 325.1.8 |
| 13 | CD | e5j4dCD1 | CD:2-89 | Ribosomal_S15 | 616 → 616.1 → 616.1.1 |
| 14 | DA | e5j4dDA1 | DA:2-54 | Ribosomal_L33 | 375 → 375.1 → 375.1.1 |
| 15 | DC | e5j4dDC1 | DC:2-98 | Ribosomal_L28 | 4232 → 4232.1 → 4232.1.1 |
| 16 | DD | e5j4dDD1 | DD:1-83 | Ribosomal_S16 | 837 → 837.1 → 837.1.1 |
| 17 | E | e5j4dE1 | E:127-276 | Ribosomal_L2_C | 4 → 4.1 → 4.1.1 |
| 18 | E | e5j4dE2 | E:2-126 | Ribosomal_L2 | 2 → 2.1 → 2.1.1 |
| 19 | EA | e5j4dEA1 | EA:1-48 | Ribosomal_L34 | 3074 → 3074.1 → 3074.1.1 |
| 20 | EC | e5j4dEC1 | EC:1-70 | Ribosomal_L29 | 192 → 192.4 → 192.4.1 |
| 21 | ED | e5j4dED1 | ED:2-100 | Ribosomal_S17 | 2 → 2.1 → 2.1.1 |
| 22 | F | e5j4dF1 | F:1-204 | Ribosomal_L3 | 1 → 1.1 → 1.1.7 |
| 23 | FA | e5j4dFA1 | FA:2-65 | Ribosomal_L35p | 4281 → 4281.1 → 4281.1.1 |
| 24 | FC | e5j4dFC1 | FC:1-60 | Ribosomal_L30 | 887 → 887.1 → 887.1.1 |
| 25 | FD | e5j4dFD1 | FD:19-88 | Ribosomal_S18 | 101 → 101.1 → 101.1.1 |
| 26 | G | e5j4dG1 | G:6-207 | Ribosomal_L4 | 7559 → 7559.1 → 7559.1.1 |
| 27 | GA | e5j4dGA1 | GA:1-37 | Ribosomal_L36 | 919 → 919.1 → 919.1.1 |
| 28 | GC | e5j4dGC1 | GC:1-69 | Ribosomal_L31 | 4987 → 4987.1 → 4987.1.1 |
| 29 | GD | e5j4dGD1 | GD:2-84 | Ribosomal_S19 | 838 → 838.1 → 838.1.1 |
| 30 | H | e5j4dH1 | H:2-182 | Ribosomal_L5,Ribosomal_L5_C | 882 → 882.1 → 882.1.1 |
| 31 | HC | e5j4dHC1 | HC:2-60 | Ribosomal_L32p | 375 → 375.1 → 375.1.1 |
| 32 | HD | e5j4dHD1 | HD:8-106 | Ribosomal_S20p | 604 → 604.9 → 604.9.1 |
| 33 | I | e5j4dI1 | I:83-175 | Ribosomal_L6 | 318 → 318.1 → 318.1.1 |
| 34 | I | e5j4dI2 | I:2-82 | Ribosomal_L6 | 318 → 318.1 → 318.1.1 |
| 35 | IC | e5j4dIC1 | IC:2-54 | Ribosomal_L33 | 375 → 375.1 → 375.1.1 |
| 36 | J | e5j4dJ1 | J:1-53 | Ribosomal_L9_N | 4076 → 4076.1 → 4076.1.1 |
| 37 | J | e5j4dJ2 | J:54-146 | Ribosomal_L9_C | 523 → 523.1 → 523.1.1 |
| 38 | JA | e5j4dJA1 | JA:101-210 | PCRF | 304 → 304.116 → 304.116.1 |
| 39 | JA | e5j4dJA2 | JA:211-290 | RF-1 | 330 → 330.3 → 330.3.1 |
| 40 | JA | e5j4dJA3 | JA:291-358 | 330.3.1.0 | 330 → 330.3 → 330.3.1 |
| 41 | JB | e5j4dJB1 | JB:2-126 | Ribosomal_L2 | 2 → 2.1 → 2.1.1 |
| 42 | JB | e5j4dJB2 | JB:127-276 | Ribosomal_L2_C | 4 → 4.1 → 4.1.1 |
| 43 | JC | e5j4dJC1 | JC:1-48 | Ribosomal_L34 | 3074 → 3074.1 → 3074.1.1 |
| 44 | K | e5j4dK1 | K:1-140 | Ribosomal_L13 | 2490 → 2490.2 → 2490.2.1 |
| 45 | KA | e5j4dKA1 | KA:7-240 | Ribosomal_S2 | 2007 → 2007.6 → 2007.6.1 |
| 46 | KB | e5j4dKB1 | KB:1-204 | Ribosomal_L3 | 1 → 1.1 → 1.1.7 |
| 47 | KC | e5j4dKC1 | KC:2-65 | Ribosomal_L35p | 4281 → 4281.1 → 4281.1.1 |
| 48 | L | e5j4dL1 | L:1-122 | Ribosomal_L14 | 3174 → 3174.1 → 3174.1.1 |
| 49 | LA | e5j4dLA1 | LA:107-207 | Ribosomal_S3_C | 230 → 230.2 → 230.2.1 |
| 50 | LA | e5j4dLA2 | LA:2-106 | KH_2 | 327 → 327.11 → 327.11.1 |
| 51 | LB | e5j4dLB1 | LB:6-207 | Ribosomal_L4 | 7559 → 7559.1 → 7559.1.1 |
| 52 | LC | e5j4dLC1 | LC:1-37 | Ribosomal_L36 | 919 → 919.1 → 919.1.1 |
| 53 | M | e5j4dM1 | M:1-150 | Ribosomal_L27A, PF29471 | 2490 → 2490.3 → 2490.3.1 |
| 54 | MA | e5j4dMA1 | MA:2-209 | Ribosomal_S4,S4 | 221 → 221.1 → 221.1.2 |
| 55 | MB | e5j4dMB1 | MB:2-182 | Ribosomal_L5,Ribosomal_L5_C | 882 → 882.1 → 882.1.1 |
| 56 | N | e5j4dN1 | N:1-141 | Ribosomal_L16 | 325 → 325.1 → 325.1.5 |
| 57 | NA | e5j4dNA1 | NA:5-73 | Ribosomal_S5 | 330 → 330.1 → 330.1.1 |
| 58 | NA | e5j4dNA2 | NA:74-155 | Ribosomal_S5_C | 212 → 212.1 → 212.1.1 |
| 59 | NB | e5j4dNB1 | NB:83-175 | Ribosomal_L6 | 318 → 318.1 → 318.1.1 |
| 60 | NB | e5j4dNB2 | NB:2-82 | Ribosomal_L6 | 318 → 318.1 → 318.1.1 |
| 61 | O | e5j4dO1 | O:1-118 | Ribosomal_L17 | 218 → 218.3 → 218.3.1 |
| 62 | OA | e5j4dOA1 | OA:1-101 | Ribosomal_S6 | 304 → 304.12 → 304.12.1 |
| 63 | OB | e5j4dOB1 | OB:53-146 | Ribosomal_L9_C | 523 → 523.1 → 523.1.1 |
| 64 | OB | e5j4dOB2 | OB:1-52 | Ribosomal_L9_N | 4076 → 4076.1 → 4076.1.1 |
| 65 | OC | e5j4dOC1 | OC:101-210 | PCRF | 304 → 304.116 → 304.116.1 |
| 66 | OC | e5j4dOC2 | OC:211-290 | RF-1 | 330 → 330.3 → 330.3.1 |
| 67 | OC | e5j4dOC3 | OC:291-358 | 330.3.1.0 | 330 → 330.3 → 330.3.1 |
| 68 | P | e5j4dP1 | P:3-112 | Ribosomal_L18p | 2484 → 2484.1 → 2484.1.1 |
| 69 | PA | e5j4dPA1 | PA:2-156 | Ribosomal_S7 | 167 → 167.1 → 167.1.1 |
| 70 | PB | e5j4dPB1 | PB:1-140 | Ribosomal_L13 | 2490 → 2490.2 → 2490.2.1 |
| 71 | PC | e5j4dPC1 | PC:7-240 | Ribosomal_S2 | 2007 → 2007.6 → 2007.6.1 |
| 72 | Q | e5j4dQ1 | Q:1-137 | Ribosomal_L19 | 4 → 4.1 → 4.1.1 |
| 73 | QA | e5j4dQA1 | QA:67-138 | Ribosomal_S8 | 4988 → 4988.1 → 4988.1.1 |
| 74 | QA | e5j4dQA2 | QA:1-66 | Ribosomal_S8 | 320 → 320.2 → 320.2.1 |
| 75 | QB | e5j4dQB1 | QB:1-122 | Ribosomal_L14 | 3174 → 3174.1 → 3174.1.1 |
| 76 | QC | e5j4dQC1 | QC:2-106 | KH_2 | 327 → 327.11 → 327.11.1 |
| 77 | QC | e5j4dQC2 | QC:107-207 | Ribosomal_S3_C | 230 → 230.2 → 230.2.1 |
| 78 | R | e5j4dR1 | R:2-118 | Ribosomal_L20 | 143 → 143.2 → 143.2.1 |
| 79 | RA | e5j4dRA1 | RA:2-128 | Ribosomal_S9 | 212 → 212.1 → 212.1.1 |
| 80 | RB | e5j4dRB1 | RB:1-150 | Ribosomal_L27A, PF29471 | 2490 → 2490.3 → 2490.3.1 |
| 81 | RC | e5j4dRC1 | RC:2-209 | Ribosomal_S4,S4 | 221 → 221.1 → 221.1.2 |
| 82 | S | e5j4dS1 | S:1-101 | Ribosomal_L21p | 4186 → 4186.1 → 4186.1.1 |
| 83 | SA | e5j4dSA1 | SA:3-100 | Ribosomal_S10 | 304 → 304.44 → 304.44.1 |
| 84 | SB | e5j4dSB1 | SB:1-141 | Ribosomal_L16 | 325 → 325.1 → 325.1.5 |
| 85 | SC | e5j4dSC1 | SC:5-73 | Ribosomal_S5 | 330 → 330.1 → 330.1.1 |
| 86 | SC | e5j4dSC2 | SC:74-155 | Ribosomal_S5_C | 212 → 212.1 → 212.1.1 |
| 87 | T | e5j4dT1 | T:1-112 | Ribosomal_L22 | 218 → 218.2 → 218.2.1 |
| 88 | TA | e5j4dTA1 | TA:11-126 | Ribosomal_S11 | 2484 → 2484.1 → 2484.1.1 |
| 89 | TB | e5j4dTB1 | TB:1-118 | Ribosomal_L17 | 218 → 218.3 → 218.3.1 |
| 90 | TC | e5j4dTC1 | TC:1-101 | Ribosomal_S6 | 304 → 304.12 → 304.12.1 |
| 91 | U | e5j4dU1 | U:1-95 | Ribosomal_L23 | 304 → 304.109 → 304.109.1 |
| 92 | UA | e5j4dUA1 | UA:5-126 | Ribosom_S12_S23 | 2 → 2.1 → 2.1.1 |
| 93 | UB | e5j4dUB1 | UB:3-112 | Ribosomal_L18p | 2484 → 2484.1 → 2484.1.1 |
| 94 | UC | e5j4dUC1 | UC:2-156 | Ribosomal_S7 | 167 → 167.1 → 167.1.1 |
| 95 | V | e5j4dV1 | V:1-107 | KOW,ribosomal_L24 | 4 → 4.1 → 4.1.1 |
| 96 | VA | e5j4dVA1 | VA:2-118 | Ribosomal_S13 | 102 → 102.2 → 102.2.1 |
| 97 | VB | e5j4dVB1 | VB:1-137 | Ribosomal_L19 | 4 → 4.1 → 4.1.1 |
| 98 | VC | e5j4dVC1 | VC:1-66 | Ribosomal_S8 | 320 → 320.2 → 320.2.1 |
| 99 | VC | e5j4dVC2 | VC:67-138 | Ribosomal_S8 | 4988 → 4988.1 → 4988.1.1 |
| 100 | W | e5j4dW1 | W:1-92 | Ribosomal_L25p | 239 → 239.1 → 239.1.1 |
| 101 | W | e5j4dW2 | W:93-189 | Ribosomal_TL5_C | 240 → 240.1 → 240.1.1 |
| 102 | WA | e5j4dWA1 | WA:2-61 | Ribosomal_S14 | 377 → 377.1 → 377.1.1 |
| 103 | WB | e5j4dWB1 | WB:2-118 | Ribosomal_L20 | 143 → 143.2 → 143.2.1 |
| 104 | WC | e5j4dWC1 | WC:2-128 | Ribosomal_S9 | 212 → 212.1 → 212.1.1 |
| 105 | X | e5j4dX1 | X:2-85 | Ribosomal_L27 | 325 → 325.1 → 325.1.8 |
| 106 | XA | e5j4dXA1 | XA:2-89 | Ribosomal_S15 | 616 → 616.1 → 616.1.1 |
| 107 | XB | e5j4dXB1 | XB:1-101 | Ribosomal_L21p | 4186 → 4186.1 → 4186.1.1 |
| 108 | XC | e5j4dXC1 | XC:3-100 | Ribosomal_S10 | 304 → 304.44 → 304.44.1 |
| 109 | Y | e5j4dY1 | Y:2-98 | Ribosomal_L28 | 4232 → 4232.1 → 4232.1.1 |
| 110 | YA | e5j4dYA1 | YA:1-83 | Ribosomal_S16 | 837 → 837.1 → 837.1.1 |
| 111 | YB | e5j4dYB1 | YB:1-112 | Ribosomal_L22 | 218 → 218.2 → 218.2.1 |
| 112 | YC | e5j4dYC1 | YC:11-126 | Ribosomal_S11 | 2484 → 2484.1 → 2484.1.1 |
| 113 | Z | e5j4dZ1 | Z:1-70 | Ribosomal_L29 | 192 → 192.4 → 192.4.1 |
| 114 | ZA | e5j4dZA1 | ZA:2-100 | Ribosomal_S17 | 2 → 2.1 → 2.1.1 |
| 115 | ZB | e5j4dZB1 | ZB:1-95 | Ribosomal_L23 | 304 → 304.109 → 304.109.1 |
| 116 | ZC | e5j4dZC1 | ZC:5-126 | Ribosom_S12_S23 | 2 → 2.1 → 2.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors