PDB 5J8B
X-RAY DIFFRACTION2.59 Å0 chains62 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
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1 domainChain bview chain
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2 domainsChain Cview chain
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2 domainsChain Hview chain
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1 domainChain Kview chain
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1 domainChain mview chain
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1 domainChain Qview chain
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6 domainsChain Zview chain
1 domainAll Domains (62)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | 0 | e5j8b01 | 0:11-84 | 325.1.8.0 | 325 → 325.1 → 325.1.8 |
| 2 | 1 | e5j8b11 | 1:2-98 | Ribosomal_L28 | 4232 → 4232.1 → 4232.1.1 |
| 3 | 2 | e5j8b21 | 2:1-70 | Ribosomal_L29 | 192 → 192.4 → 192.4.1 |
| 4 | 3 | e5j8b31 | 3:2-60 | Ribosomal_L30 | 887 → 887.1 → 887.1.1 |
| 5 | 4 | e5j8b41 | 4:1-69 | Ribosomal_L31 | 4987 → 4987.1 → 4987.1.1 |
| 6 | 5 | e5j8b51 | 5:2-60 | Ribosomal_L32p | 375 → 375.1 → 375.1.1 |
| 7 | 6 | e5j8b61 | 6:2-54 | Ribosomal_L33 | 375 → 375.1 → 375.1.1 |
| 8 | 7 | e5j8b71 | 7:1-49 | Ribosomal_L34 | 3074 → 3074.1 → 3074.1.1 |
| 9 | 8 | e5j8b81 | 8:2-65 | Ribosomal_L35p | 4281 → 4281.1 → 4281.1.1 |
| 10 | 9 | e5j8b91 | 9:1-37 | Ribosomal_L36 | 919 → 919.1 → 919.1.1 |
| 11 | b | e5j8bb1 | b:7-237 | Ribosomal_S2 | 2007 → 2007.6 → 2007.6.1 |
| 12 | c | e5j8bc1 | c:107-207 | Ribosomal_S3_C | 230 → 230.2 → 230.2.1 |
| 13 | c | e5j8bc2 | c:2-106 | KH_2 | 327 → 327.11 → 327.11.1 |
| 14 | C | e5j8bC1 | C:3-70,C:158-226 | Ribosomal_L1 | 898 → 898.1 → 898.1.1 |
| 15 | d | e5j8bd1 | d:2-209 | Ribosomal_S4,S4 | 221 → 221.1 → 221.1.2 |
| 16 | D | e5j8bD1 | D:2-126 | Ribosomal_L2 | 2 → 2.1 → 2.1.1 |
| 17 | D | e5j8bD2 | D:127-276 | Ribosomal_L2_C | 4 → 4.1 → 4.1.1 |
| 18 | e | e5j8be1 | e:5-73 | Ribosomal_S5 | 330 → 330.1 → 330.1.1 |
| 19 | e | e5j8be2 | e:74-152 | Ribosomal_S5_C | 212 → 212.1 → 212.1.1 |
| 20 | E | e5j8bE1 | E:1-204 | Ribosomal_L3 | 1 → 1.1 → 1.1.7 |
| 21 | f | e5j8bf1 | f:1-100 | Ribosomal_S6 | 304 → 304.12 → 304.12.1 |
| 22 | F | e5j8bF1 | F:6-208 | Ribosomal_L4 | 7559 → 7559.1 → 7559.1.1 |
| 23 | g | e5j8bg1 | g:2-156 | Ribosomal_S7 | 167 → 167.1 → 167.1.1 |
| 24 | G | e5j8bG1 | G:2-182 | Ribosomal_L5,Ribosomal_L5_C | 882 → 882.1 → 882.1.1 |
| 25 | h | e5j8bh1 | h:67-138 | Ribosomal_S8 | 4988 → 4988.1 → 4988.1.1 |
| 26 | h | e5j8bh2 | h:2-66 | Ribosomal_S8 | 320 → 320.2 → 320.2.1 |
| 27 | H | e5j8bH1 | H:83-175 | Ribosomal_L6 | 318 → 318.1 → 318.1.1 |
| 28 | H | e5j8bH2 | H:2-82 | Ribosomal_L6 | 318 → 318.1 → 318.1.1 |
| 29 | i | e5j8bi1 | i:2-128 | Ribosomal_S9 | 212 → 212.1 → 212.1.1 |
| 30 | j | e5j8bj1 | j:5-100 | Ribosomal_S10 | 304 → 304.44 → 304.44.1 |
| 31 | J | e5j8bJ1 | J:4-133 | Ribosomal_L10 | 304 → 304.60 → 304.60.1 |
| 32 | k | e5j8bk1 | k:13-126 | Ribosomal_S11 | 2484 → 2484.1 → 2484.1.1 |
| 33 | K | e5j8bK1 | K:2-72 | Ribosomal_L11_N | 3781 → 3781.1 → 3781.1.1 |
| 34 | K | e5j8bK2 | K:73-140 | Ribosomal_L11 | 101 → 101.1 → 101.1.16 |
| 35 | l | e5j8bl1 | l:5-126 | Ribosom_S12_S23 | 2 → 2.1 → 2.1.1 |
| 36 | m | e5j8bm1 | m:2-120 | Ribosomal_S13 | 102 → 102.2 → 102.2.1 |
| 37 | n | e5j8bn1 | n:2-61 | Ribosomal_S14 | 377 → 377.1 → 377.1.1 |
| 38 | N | e5j8bN1 | N:1-140 | Ribosomal_L13 | 2490 → 2490.2 → 2490.2.1 |
| 39 | o | e5j8bo1 | o:2-89 | Ribosomal_S15 | 616 → 616.1 → 616.1.1 |
| 40 | O | e5j8bO1 | O:1-122 | Ribosomal_L14 | 3174 → 3174.1 → 3174.1.1 |
| 41 | p | e5j8bp1 | p:1-82 | Ribosomal_S16 | 837 → 837.1 → 837.1.1 |
| 42 | P | e5j8bP1 | P:1-149 | Ribosomal_L27A, PF29471 | 2490 → 2490.3 → 2490.3.1 |
| 43 | q | e5j8bq1 | q:2-100 | Ribosomal_S17 | 2 → 2.1 → 2.1.1 |
| 44 | Q | e5j8bQ1 | Q:1-141 | Ribosomal_L16 | 325 → 325.1 → 325.1.5 |
| 45 | r | e5j8br1 | r:20-87 | Ribosomal_S18 | 101 → 101.1 → 101.1.1 |
| 46 | R | e5j8bR1 | R:1-118 | Ribosomal_L17 | 218 → 218.3 → 218.3.1 |
| 47 | s | e5j8bs1 | s:2-84 | Ribosomal_S19 | 838 → 838.1 → 838.1.1 |
| 48 | S | e5j8bS1 | S:3-112 | Ribosomal_L18p | 2484 → 2484.1 → 2484.1.1 |
| 49 | t | e5j8bt1 | t:8-103 | Ribosomal_S20p | 604 → 604.9 → 604.9.1 |
| 50 | T | e5j8bT1 | T:1-131 | Ribosomal_L19 | 4 → 4.1 → 4.1.1 |
| 51 | U | e5j8bU1 | U:2-117 | Ribosomal_L20 | 143 → 143.2 → 143.2.1 |
| 52 | V | e5j8bV1 | V:1-101 | Ribosomal_L21p | 4186 → 4186.1 → 4186.1.1 |
| 53 | W | e5j8bW1 | W:1-112 | Ribosomal_L22 | 218 → 218.2 → 218.2.1 |
| 54 | X | e5j8bX1 | X:1-95 | Ribosomal_L23 | 304 → 304.109 → 304.109.1 |
| 55 | Y | e5j8bY1 | Y:1-107 | KOW,ribosomal_L24 | 4 → 4.1 → 4.1.1 |
| 56 | z | e5j8bz1 | z:6-189 | GTP_EFTU | 2004 → 2004.1 → 2004.1.1 |
| 57 | z | e5j8bz3 | z:190-296 | GTP_EFTU_D2 | 1 → 1.1 → 1.1.7 |
| 58 | z | e5j8bz4 | z:293-373 | EFG_III | 304 → 304.24 → 304.24.1 |
| 59 | z | e5j8bz5 | z:-68--10 | Ribosomal_L9_N | 4076 → 4076.1 → 4076.1.1 |
| 60 | z | e5j8bz6 | z:487-602 | LepA_C | 3986 → 3986.1 → 3986.1.1 |
| 61 | z | e5j8bz7 | z:375-486 | EFG_C | 304 → 304.24 → 304.24.1 |
| 62 | Z | e5j8bZ1 | Z:1-94 | Ribosomal_L25p | 239 → 239.1 → 239.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors