PDB 5LJ5
ELECTRON MICROSCOPY0 chains65 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Aview chain
6 domainsChain bview chain
1 domainChain Bview chain
12 domainsChain Cview chain
5 domainsChain dview chain
1 domainChain eview chain
1 domainChain fview chain
1 domainChain gview chain
1 domainChain Gview chain
1 domainChain hview chain
1 domainChain Hview chain
2 domainsChain jview chain
1 domainChain Jview chain
1 domainChain kview chain
1 domainChain lview chain
1 domainChain Lview chain
1 domainChain mview chain
1 domainChain Mview chain
2 domainsChain nview chain
1 domainChain Nview chain
2 domainsChain Oview chain
2 domainsChain pview chain
1 domainChain qview chain
1 domainChain Qview chain
4 domainsChain rview chain
1 domainChain Rview chain
1 domainChain Sview chain
1 domainChain tview chain
2 domainsChain Tview chain
1 domainChain uview chain
2 domainsChain vview chain
2 domainsChain wview chain
2 domainsChain Wview chain
1 domainChain Yview chain
1 domainAll Domains (65)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e5lj5A1 | A:1829-2085 | PRP8_domainIV | 2484 → 2484.1 → 2484.1.1 |
| 2 | A | e5lj5A2 | A:1575-1828 | U6-snRNA_bdg | 2008 → 2008.1 → 2008.1.1 |
| 3 | A | e5lj5A3 | A:884-1255 | RRM_4 | 304 → 304.48 → 304.48.1 |
| 4 | A | e5lj5A4 | A:1256-1574 | U6-snRNA_bdg,U5_2-snRNA_bdg | 4967 → 4967.1 → 4967.1.1 |
| 5 | A | e5lj5A5 | A:2150-2395 | PROCT | 2492 → 2492.1 → 2492.1.1 |
| 6 | A | e5lj5A6 | A:128-428,A:456-883 | PRO8NT,PROCN | 1038 → 1038.1 → 1038.1.1 |
| 7 | b | e5lj5b1 | b:4-53,b:77-102 | LSM | 4 → 4.1 → 4.1.1 |
| 8 | B | e5lj5B1 | B:1334-1541 | DEAD | 2004 → 2004.1 → 2004.1.1 |
| 9 | B | e5lj5B2 | B:442-700 | DEAD | 2004 → 2004.1 → 2004.1.1 |
| 10 | B | e5lj5B3 | B:1199-1333 | Sec63 | 11 → 11.1 → 11.1.1 |
| 11 | B | e5lj5B4 | B:1542-1740 | 2004.1.1.0 | 2004 → 2004.1 → 2004.1.1 |
| 12 | B | e5lj5B5 | B:1741-1824,B:1846-1858 | SNRNP200_wHTH | 101 → 101.1 → 101.1.2 |
| 13 | B | e5lj5B6 | B:1992-2049 | 102.5.1.0 | 102 → 102.5 → 102.5.1 |
| 14 | B | e5lj5B7 | B:1859-1991 | Sec63 | 4156 → 4156.1 → 4156.1.1 |
| 15 | B | e5lj5B8 | B:1143-1198 | 102.5.1.0 | 102 → 102.5 → 102.5.1 |
| 16 | B | e5lj5B9 | B:2050-2163 | Sec63 | 11 → 11.1 → 11.1.1 |
| 17 | B | e5lj5B10 | B:701-905 | Helicase_C | 2004 → 2004.1 → 2004.1.1 |
| 18 | B | e5lj5B11 | B:906-1010 | SNRNP200_wHTH | 101 → 101.1 → 101.1.2 |
| 19 | B | e5lj5B12 | B:1011-1142 | Sec63 | 4156 → 4156.1 → 4156.1.1 |
| 20 | C | e5lj5C1 | C:856-976 | EFG_C | 304 → 304.24 → 304.24.1 |
| 21 | C | e5lj5C2 | C:443-508,C:529-593 | 1.1.7.0 | 1 → 1.1 → 1.1.7 |
| 22 | C | e5lj5C3 | C:708-855 | EFG_IV | 212 → 212.1 → 212.1.1 |
| 23 | C | e5lj5C4 | C:118-442 | GTP_EFTU | 2004 → 2004.1 → 2004.1.1 |
| 24 | C | e5lj5C5 | C:594-693 | 304.24.1.0 | 304 → 304.24 → 304.24.1 |
| 25 | d | e5lj5d1 | d:4-85 | LSM | 4 → 4.1 → 4.1.1 |
| 26 | e | e5lj5e1 | e:10-92 | LSM | 4 → 4.1 → 4.1.1 |
| 27 | f | e5lj5f1 | f:12-83 | LSM | 4 → 4.1 → 4.1.1 |
| 28 | g | e5lj5g1 | g:2-76 | LSM | 4 → 4.1 → 4.1.1 |
| 29 | G | e5lj5G1 | G:30-96 | Isy1 | 192 → 192.13 → 192.13.1 |
| 30 | h | e5lj5h1 | h:1-48,h:76-109 | LSM | 4 → 4.1 → 4.1.1 |
| 31 | H | e5lj5H1 | H:11-207 | 109.4.1.0 | 109 → 109.4 → 109.4.1 |
| 32 | H | e5lj5H2 | H:289-451 | MA3 | 109 → 109.4 → 109.4.1 |
| 33 | j | e5lj5j1 | j:15-108 | LSM | 4 → 4.1 → 4.1.1 |
| 34 | J | e5lj5J1 | J:111-429,J:438-445 | WD40, Beta-prop_NOL10_N | 5 → 5.1 → 5.1.4 |
| 35 | k | e5lj5k1 | k:4-53,k:77-102 | LSM | 4 → 4.1 → 4.1.1 |
| 36 | l | e5lj5l1 | l:1-48,l:76-106 | LSM | 4 → 4.1 → 4.1.1 |
| 37 | L | e5lj5L1 | L:2-156 | BUD31 | 3952 → 3952.1 → 3952.1.1 |
| 38 | m | e5lj5m1 | m:15-108 | LSM | 4 → 4.1 → 4.1.1 |
| 39 | M | e5lj5M1 | M:130-227 | RRM_1 | 304 → 304.9 → 304.9.1 |
| 40 | M | e5lj5M2 | M:1-129 | Torus | 906 → 906.1 → 906.1.1 |
| 41 | n | e5lj5n1 | n:4-85 | LSM | 4 → 4.1 → 4.1.1 |
| 42 | N | e5lj5N1 | N:204-266,N:289-296,N:306-324 | 304.9.1.0 | 304 → 304.9 → 304.9.1 |
| 43 | N | e5lj5N2 | N:6-143 | STL11_N | 376 → 376.1 → 376.1.3 |
| 44 | O | e5lj5O1 | O:13-58 | Myb_DNA-binding | 101 → 101.1 → 101.1.1 |
| 45 | O | e5lj5O2 | O:62-109,O:230-252 | Myb_DNA-binding | 101 → 101.1 → 101.1.1 |
| 46 | p | e5lj5p1 | p:10-92 | LSM | 4 → 4.1 → 4.1.1 |
| 47 | q | e5lj5q1 | q:12-83 | LSM | 4 → 4.1 → 4.1.1 |
| 48 | Q | e5lj5Q1 | Q:748-895 | HA2_N,HA2_C | 4156 → 4156.1 → 4156.1.1 |
| 49 | Q | e5lj5Q2 | Q:529-711 | Helicase_C | 2004 → 2004.1 → 2004.1.1 |
| 50 | Q | e5lj5Q3 | Q:338-528,Q:712-747 | DEAD | 2004 → 2004.1 → 2004.1.1 |
| 51 | Q | e5lj5Q4 | Q:896-978 | OB_NTP_bind | 2 → 2.1 → 2.1.1 |
| 52 | r | e5lj5r1 | r:2-76 | LSM | 4 → 4.1 → 4.1.1 |
| 53 | R | e5lj5R1 | R:60-111 | cwf21 | 6026 → 6026.1 → 6026.1.1 |
| 54 | S | e5lj5S1 | S:37-556 | HAT, HAT_Syf1_CNRKL1_N, HAT_PRP39_N | 109 → 109.4 → 109.4.1 |
| 55 | t | e5lj5t1 | t:1-61 | U-box | 376 → 376.1 → 376.1.1 |
| 56 | t | e5lj5t2 | t:144-493 | 5.1.5.0 | 5 → 5.1 → 5.1.5 |
| 57 | T | e5lj5T1 | T:21-163,T:196-349,T:375-790 | HAT_Syf1_M, HAT_Syf1_CNRKL1_C, HAT_Syf1_CNRKL1_N | 109 → 109.4 → 109.4.1 |
| 58 | u | e5lj5u1 | u:1-61 | U-box | 376 → 376.1 → 376.1.1 |
| 59 | u | e5lj5u2 | u:144-493 | 5.1.5.0 | 5 → 5.1 → 5.1.5 |
| 60 | v | e5lj5v1 | v:1-61 | U-box | 376 → 376.1 → 376.1.1 |
| 61 | v | e5lj5v2 | v:144-493 | 5.1.5.0 | 5 → 5.1 → 5.1.5 |
| 62 | w | e5lj5w1 | w:1-61 | U-box | 376 → 376.1 → 376.1.1 |
| 63 | w | e5lj5w2 | w:144-493 | 5.1.5.0 | 5 → 5.1 → 5.1.5 |
| 64 | W | e5lj5W1 | W:1-167 | LRR_9 | 207 → 207.1 → 207.1.1 |
| 65 | Y | e5lj5Y1 | Y:28-111 | RRM_5 | 304 → 304.9 → 304.9.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors