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PDB 5LYB

X-RAY DIFFRACTION3.25 Å0 chains179 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

All Domains (179)

#ChainDomain IDRangeFamilyClassification
1c0e5lybc01c0:1-98S10_plectin101 → 101.1 → 101.1.2
2C0e5lybC01C0:1-96S10_plectin101 → 101.1 → 101.1.2
3c1e5lybc11c1:2-147Ribosomal_S17,Ribosomal_S17_N2 → 2.1 → 2.1.1
4C1e5lybC11C1:2-156Ribosomal_S17,Ribosomal_S17_N2 → 2.1 → 2.1.1
5c2e5lybc21c2:20-143Ribosomal_L7Ae301 → 301.1 → 301.1.1
6C2e5lybC21C2:20-143Ribosomal_L7Ae301 → 301.1 → 301.1.1
7c3e5lybc31c3:83-151Ribosomal_S15616 → 616.1 → 616.1.1
8c3e5lybc32c3:2-82Ribosomal_S13_N101 → 101.40 → 101.40.1
9C3e5lybC31C3:2-82Ribosomal_S13_N101 → 101.40 → 101.40.1
10C3e5lybC32C3:83-151Ribosomal_S15616 → 616.1 → 616.1.1
11c4e5lybc41c4:10-137Ribosomal_S112484 → 2484.1 → 2484.1.1
12C4e5lybC41C4:11-137Ribosomal_S112484 → 2484.1 → 2484.1.1
13c5e5lybc51c5:4-138Ribosomal_S19838 → 838.1 → 838.1.1
14C5e5lybC51C5:8-131Ribosomal_S19838 → 838.1 → 838.1.1
15c6e5lybc61c6:2-143Ribosomal_S9212 → 212.1 → 212.1.1
16C6e5lybC61C6:3-143Ribosomal_S9212 → 212.1 → 212.1.1
17c7e5lybc71c7:2-122Ribosomal_S17e101 → 101.1 → 101.1.17
18C7e5lybC71C7:2-126Ribosomal_S17e101 → 101.1 → 101.1.17
19c8e5lybc81c8:2-146Ribosomal_S13102 → 102.2 → 102.2.1
20C8e5lybC81C8:2-146Ribosomal_S13102 → 102.2 → 102.2.1
21c9e5lybc91c9:2-144Ribosomal_S19e101 → 101.1 → 101.1.2
22C9e5lybC91C9:2-144Ribosomal_S19e101 → 101.1 → 101.1.2
23d0e5lybd01d0:12-121Ribosomal_S10304 → 304.44 → 304.44.1
24D0e5lybD01D0:15-121Ribosomal_S10304 → 304.44 → 304.44.1
25d1e5lybd11d1:1-87Ribosomal_S21e3167 → 3167.1 → 3167.1.1
26D1e5lybD11D1:1-87Ribosomal_S21e3167 → 3167.1 → 3167.1.1
27d2e5lybd21d2:68-130Ribosomal_S84988 → 4988.1 → 4988.1.1
28d2e5lybd22d2:2-67Ribosomal_S8320 → 320.2 → 320.2.1
29D2e5lybD21D2:2-67Ribosomal_S8320 → 320.2 → 320.2.1
30D2e5lybD22D2:68-130Ribosomal_S84988 → 4988.1 → 4988.1.1
31d3e5lybd31d3:2-145Ribosom_S12_S232 → 2.1 → 2.1.1
32D3e5lybD31D3:2-145Ribosom_S12_S232 → 2.1 → 2.1.1
33d4e5lybd41d4:2-135Ribosomal_S24e304 → 304.109 → 304.109.1
34D4e5lybD41D4:2-135Ribosomal_S24e304 → 304.109 → 304.109.1
35d5e5lybd51d5:37-105Ribosomal_S25101 → 101.1 → 101.1.2
36D5e5lybD51D5:36-105Ribosomal_S25101 → 101.1 → 101.1.2
37d6e5lybd61d6:2-98Ribosomal_S26e377 → 377.1 → 377.1.1
38D6e5lybD61D6:2-98Ribosomal_S26e377 → 377.1 → 377.1.1
39d7e5lybd71d7:2-82Ribosomal_S27e375 → 375.1 → 375.1.1
40D7e5lybD71D7:2-82Ribosomal_S27e375 → 375.1 → 375.1.1
41d8e5lybd81d8:5-67Ribosomal_S28e2 → 2.1 → 2.1.1
42D8e5lybD81D8:5-67Ribosomal_S28e2 → 2.1 → 2.1.1
43d9e5lybd91d9:4-56Ribosomal_S14377 → 377.1 → 377.1.1
44D9e5lybD91D9:4-56Ribosomal_S14377 → 377.1 → 377.1.1
45e0e5lybe01e0:2-63Ribosomal_S303168 → 3168.1 → 3168.1.1
46E0e5lybE01E0:2-61Ribosomal_S303168 → 3168.1 → 3168.1.1
47e1e5lybe11e1:77-152Ribosomal_S27375 → 375.1 → 375.1.1
48E1e5lybE11E1:82-152Ribosomal_S27375 → 375.1 → 375.1.1
49l2e5lybl21l2:2-98Ribosomal_L22 → 2.1 → 2.1.1
50l2e5lybl22l2:99-253Ribosomal_L2_C4 → 4.1 → 4.1.1
51L2e5lybL21L2:99-253Ribosomal_L2_C4 → 4.1 → 4.1.1
52L2e5lybL22L2:2-98Ribosomal_L22 → 2.1 → 2.1.1
53l3e5lybl31l3:2-387Ribosomal_L31 → 1.1 → 1.1.7
54L3e5lybL31L3:2-387Ribosomal_L31 → 1.1 → 1.1.7
55l4e5lybl41l4:2-269Ribosomal_L47559 → 7559.1 → 7559.1.1
56l4e5lybl42l4:270-362Ribos_L4_asso_C3319 → 3319.1 → 3319.1.1
57L4e5lybL41L4:2-269Ribosomal_L47559 → 7559.1 → 7559.1.1
58L4e5lybL42L4:270-362Ribos_L4_asso_C3319 → 3319.1 → 3319.1.1
59l5e5lybl51l5:4-297Ribosomal_L18_c,Ribosomal_L5e2484 → 2484.1 → 2484.1.1
60L5e5lybL51L5:2-297Ribosomal_L18_c,Ribosomal_L5e2484 → 2484.1 → 2484.1.1
61l6e5lybl61l6:2-176Ribosomal_L6e4 → 4.1 → 4.1.1
62L6e5lybL61L6:2-109,L6:129-176Ribosomal_L6e4 → 4.1 → 4.1.1
63l7e5lybl71l7:22-244Ribosomal_L30,Ribosomal_L30_N887 → 887.1 → 887.1.1
64L7e5lybL71L7:23-244Ribosomal_L30,Ribosomal_L30_N887 → 887.1 → 887.1.1
65l8e5lybl81l8:24-254Ribosomal_L7Ae301 → 301.1 → 301.1.1
66L8e5lybL81L8:24-256Ribosomal_L7Ae301 → 301.1 → 301.1.1
67l9e5lybl91l9:86-191Ribosomal_L6318 → 318.1 → 318.1.1
68l9e5lybl92l9:1-85Ribosomal_L6318 → 318.1 → 318.1.1
69L9e5lybL91L9:86-191Ribosomal_L6318 → 318.1 → 318.1.1
70L9e5lybL92L9:1-85Ribosomal_L6318 → 318.1 → 318.1.1
71m0e5lybm01m0:2-221Ribosomal_L16325 → 325.1 → 325.1.5
72M0e5lybM01M0:2-221Ribosomal_L16325 → 325.1 → 325.1.5
73m1e5lybm11m1:6-174Ribosomal_L5,Ribosomal_L5_C882 → 882.1 → 882.1.1
74M1e5lybM11M1:6-174Ribosomal_L5,Ribosomal_L5_C882 → 882.1 → 882.1.1
75m3e5lybm31m3:2-195Ribosomal_L13e3210 → 3210.1 → 3210.1.1
76M3e5lybM31M3:2-194Ribosomal_L13e3210 → 3210.1 → 3210.1.1
77m4e5lybm41m4:2-138KOW,Ribosomal_L14e4 → 4.1 → 4.1.1
78M4e5lybM41M4:3-138KOW,Ribosomal_L14e4 → 4.1 → 4.1.1
79m5e5lybm51m5:2-204Ribosomal_L15e304 → 304.109 → 304.109.1
80M5e5lybM51M5:2-204Ribosomal_L15e304 → 304.109 → 304.109.1
81m6e5lybm61m6:3-199Ribosomal_L132490 → 2490.2 → 2490.2.1
82M6e5lybM61M6:3-199Ribosomal_L132490 → 2490.2 → 2490.2.1
83m7e5lybm71m7:2-156Ribosomal_L22218 → 218.2 → 218.2.1
84M7e5lybM71M7:2-184Ribosomal_L22218 → 218.2 → 218.2.1
85m8e5lybm81m8:2-186Ribosomal_L182490 → 2490.3 → 2490.3.1
86M8e5lybM81M8:2-186Ribosomal_L182490 → 2490.3 → 2490.3.1
87m9e5lybm91m9:57-189Ribosomal_L19e_C3050 → 3050.1 → 3050.1.1
88m9e5lybm92m9:2-56Ribosomal_L19e637 → 637.1 → 637.1.1
89M9e5lybM91M9:57-189Ribosomal_L19e_C3050 → 3050.1 → 3050.1.1
90M9e5lybM92M9:2-56Ribosomal_L19e637 → 637.1 → 637.1.1
91n0e5lybn01n0:70-172Ribosomal_L18A3115 → 3115.1 → 3115.1.1
92n0e5lybn02n0:1-693115.1.1.03115 → 3115.1 → 3115.1.1
93N0e5lybN01N0:1-693115.1.1.03115 → 3115.1 → 3115.1.1
94N0e5lybN02N0:70-172Ribosomal_L18A3115 → 3115.1 → 3115.1.1
95n1e5lybn11n1:2-160Ribosomal_L21e4 → 4.1 → 4.1.1
96N1e5lybN11N1:2-160Ribosomal_L21e4 → 4.1 → 4.1.1
97n2e5lybn21n2:11-108Ribosomal_L22e3715 → 3715.1 → 3715.1.1
98N2e5lybN21N2:9-108Ribosomal_L22e3715 → 3715.1 → 3715.1.1
99n3e5lybn31n3:2-137Ribosomal_L143174 → 3174.1 → 3174.1.1
100N3e5lybN31N3:2-137Ribosomal_L143174 → 3174.1 → 3174.1.1
101n4e5lybn41n4:1-135Ribosomal_L24e377 → 377.1 → 377.1.1
102N4e5lybN41N4:1-98Ribosomal_L24e377 → 377.1 → 377.1.1
103n5e5lybn51n5:23-142Ribosomal_L23,Ribosomal_L23eN304 → 304.109 → 304.109.1
104N5e5lybN51N5:22-142Ribosomal_L23,Ribosomal_L23eN304 → 304.109 → 304.109.1
105n6e5lybn61n6:2-127KOW, Ribosomal_L264 → 4.1 → 4.1.1
106N6e5lybN61N6:2-127KOW, Ribosomal_L264 → 4.1 → 4.1.1
107n7e5lybn71n7:2-136Ribosomal_L27e4 → 4.1 → 4.1.1
108N7e5lybN71N7:2-136Ribosomal_L27e4 → 4.1 → 4.1.1
109n8e5lybn81n8:2-149Ribosomal_L27A2490 → 2490.3 → 2490.3.1
110N8e5lybN81N8:2-149Ribosomal_L27A2490 → 2490.3 → 2490.3.1
111n9e5lybn91n9:2-59Ribosomal_L29e3212 → 3212.1 → 3212.1.1
112N9e5lybN91N9:2-59Ribosomal_L29e3212 → 3212.1 → 3212.1.1
113o0e5lybo01o0:6-105Ribosomal_L7Ae301 → 301.1 → 301.1.1
114O0e5lybO01O0:9-105Ribosomal_L7Ae301 → 301.1 → 301.1.1
115o1e5lybo11o1:4-112Ribosomal_L31e259 → 259.1 → 259.1.1
116O1e5lybO11O1:4-112Ribosomal_L31e259 → 259.1 → 259.1.1
117o2e5lybo21o2:2-128Ribosomal_L32e2490 → 2490.1 → 2490.1.1
118O2e5lybO21O2:2-128Ribosomal_L32e2490 → 2490.1 → 2490.1.1
119o3e5lybo31o3:2-107Ribosomal_L35Ae1 → 1.1 → 1.1.7
120O3e5lybO31O3:2-107Ribosomal_L35Ae1 → 1.1 → 1.1.7
121o4e5lybo41o4:2-113Ribosomal_L34e377 → 377.12 → 377.12.1
122O4e5lybO41O4:2-113Ribosomal_L34e377 → 377.12 → 377.12.1
123o5e5lybo51o5:2-120Ribosomal_L29192 → 192.4 → 192.4.1
124O5e5lybO51O5:2-120Ribosomal_L29192 → 192.4 → 192.4.1
125o6e5lybo61o6:24-100Ribosomal_L36e3166 → 3166.1 → 3166.1.1
126O6e5lybO61O6:24-100Ribosomal_L36e3166 → 3166.1 → 3166.1.1
127o7e5lybo71o7:2-88Ribosomal_L37e375 → 375.1 → 375.1.1
128O7e5lybO71O7:2-88Ribosomal_L37e375 → 375.1 → 375.1.1
129o8e5lybo81o8:2-78Ribosomal_L38e896 → 896.1 → 896.1.1
130O8e5lybO81O8:2-78Ribosomal_L38e896 → 896.1 → 896.1.1
131o9e5lybo91o9:2-51Ribosomal_L39585 → 585.1 → 585.1.1
132O9e5lybO91O9:2-51Ribosomal_L39585 → 585.1 → 585.1.1
133p0e5lybp01p0:3-107,p0:184-198Ribosomal_L10304 → 304.60 → 304.60.1
134q0e5lybq01q0:77-128Ribosomal_L40e375 → 375.1 → 375.1.1
135Q0e5lybQ01Q0:77-128Ribosomal_L40e375 → 375.1 → 375.1.1
136q1e5lybq11q1:1-25Ribosomal_L416069 → 6069.1 → 6069.1.1
137Q1e5lybQ11Q1:1-25Ribosomal_L416069 → 6069.1 → 6069.1.1
138q2e5lybq21q2:2-106Ribosomal_L44375 → 375.1 → 375.1.1
139Q2e5lybQ21Q2:2-106Ribosomal_L44375 → 375.1 → 375.1.1
140q3e5lybq31q3:2-92Ribosomal_L37ae375 → 375.1 → 375.1.1
141Q3e5lybQ31Q3:2-92Ribosomal_L37ae375 → 375.1 → 375.1.1
142s0e5lybs01s0:2-207Ribosomal_S22007 → 2007.6 → 2007.6.1
143S0e5lybS01S0:2-207Ribosomal_S22007 → 2007.6 → 2007.6.1
144s1e5lybs11s1:20-113Ribosomal_S3Ae239 → 239.5 → 239.5.1
145s1e5lybs12s1:114-235Ribosomal_S3Ae230 → 230.6 → 230.6.1
146S1e5lybS11S1:20-113Ribosomal_S3Ae239 → 239.5 → 239.5.1
147S1e5lybS12S1:114-233Ribosomal_S3Ae230 → 230.6 → 230.6.1
148s2e5lybs21s2:34-108Ribosomal_S53274 → 3274.1 → 3274.1.1
149s2e5lybs22s2:109-175Ribosomal_S5330 → 330.1 → 330.1.1
150s2e5lybs23s2:176-250Ribosomal_S5_C212 → 212.1 → 212.1.1
151S2e5lybS21S2:109-175Ribosomal_S5330 → 330.1 → 330.1.1
152S2e5lybS22S2:176-250Ribosomal_S5_C212 → 212.1 → 212.1.1
153S2e5lybS23S2:34-108Ribosomal_S53274 → 3274.1 → 3274.1.1
154s3e5lybs31s3:92-225Ribosomal_S3_C230 → 230.2 → 230.2.1
155s3e5lybs32s3:3-91KH_2327 → 327.11 → 327.11.1
156S3e5lybS31S3:3-91KH_2327 → 327.11 → 327.11.1
157S3e5lybS32S3:92-225Ribosomal_S3_C230 → 230.2 → 230.2.1
158s4e5lybs41s4:117-175Ribosomal_S4e2 → 2.1 → 2.1.1
159s4e5lybs42s4:2-116Ribosomal_S4e,S4,RS4NT221 → 221.1 → 221.1.2
160s4e5lybs43s4:176-261KOW,40S_S4_C4 → 4.1 → 4.1.1
161S4e5lybS41S4:2-116Ribosomal_S4e,S4,RS4NT221 → 221.1 → 221.1.2
162S4e5lybS42S4:117-175Ribosomal_S4e2 → 2.1 → 2.1.1
163S4e5lybS43S4:176-261KOW,40S_S4_C4 → 4.1 → 4.1.1
164s5e5lybs51s5:20-225Ribosomal_S7167 → 167.1 → 167.1.1
165S5e5lybS51S5:20-225Ribosomal_S7167 → 167.1 → 167.1.1
166s6e5lybs61s6:1-218Ribosomal_S6e239 → 239.1 → 239.1.1
167S6e5lybS61S6:1-226Ribosomal_S6e239 → 239.1 → 239.1.1
168s7e5lybs71s7:106-187Ribosomal_S7e327 → 327.18 → 327.18.1
169s7e5lybs72s7:2-105Ribosomal_S7e327 → 327.18 → 327.18.1
170S7e5lybS71S7:4-105Ribosomal_S7e327 → 327.18 → 327.18.1
171S7e5lybS72S7:106-187Ribosomal_S7e327 → 327.18 → 327.18.1
172s8e5lybs81s8:2-200Ribosomal_S8e3174 → 3174.1 → 3174.1.1
173S8e5lybS81S8:2-200Ribosomal_S8e3174 → 3174.1 → 3174.1.1
174s9e5lybs91s9:2-186Ribosomal_S4,S4221 → 221.1 → 221.1.2
175S9e5lybS91S9:2-186Ribosomal_S4,S4221 → 221.1 → 221.1.2
176sMe5lybsM1sM:23-853451.1.1.03451 → 3451.1 → 3451.1.1
177SMe5lybSM1SM:9-1413451.1.1.03451 → 3451.1 → 3451.1.1
178sRe5lybsR1sR:2-319WD405 → 5.1 → 5.1.4
179SRe5lybSR1SR:2-319WD405 → 5.1 → 5.1.4

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors