PDB 5M1J
ELECTRON MICROSCOPY0 chains95 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain A1view chain
3 domainsChain a2view chain
1 domainChain A2view chain
1 domainChain a5view chain
1 domainChain A5view chain
2 domainsChain A6view chain
4 domainsChain b2view chain
1 domainChain B2view chain
2 domainsChain b5view chain
1 domainChain B5view chain
1 domainChain c2view chain
1 domainChain c5view chain
1 domainChain C5view chain
2 domainsChain d2view chain
1 domainChain D2view chain
2 domainsChain d5view chain
1 domainChain D5view chain
1 domainChain e2view chain
1 domainChain E2view chain
3 domainsChain e5view chain
1 domainChain E5view chain
1 domainChain f2view chain
1 domainChain F2view chain
1 domainChain f5view chain
1 domainChain F5view chain
1 domainChain g2view chain
1 domainChain G2view chain
1 domainChain g5view chain
1 domainChain G5view chain
1 domainChain H2view chain
2 domainsChain h5view chain
1 domainChain H5view chain
2 domainsChain I2view chain
1 domainChain i5view chain
1 domainChain I5view chain
1 domainChain J2view chain
1 domainChain j5view chain
1 domainChain J5view chain
1 domainChain K2view chain
1 domainChain k5view chain
1 domainChain K5view chain
1 domainChain L2view chain
1 domainChain l5view chain
1 domainChain L5view chain
1 domainChain M2view chain
1 domainChain m5view chain
1 domainChain M5view chain
1 domainChain N2view chain
2 domainsChain n5view chain
1 domainChain N5view chain
1 domainChain O2view chain
1 domainChain o5view chain
1 domainChain P2view chain
1 domainChain p5view chain
1 domainChain P5view chain
1 domainChain Q2view chain
1 domainChain Q5view chain
1 domainChain R2view chain
1 domainChain R5view chain
2 domainsChain S2view chain
1 domainChain S5view chain
2 domainsChain T2view chain
1 domainChain T5view chain
1 domainChain U2view chain
1 domainChain U5view chain
1 domainChain V2view chain
1 domainChain V5view chain
1 domainChain W2view chain
2 domainsChain W5view chain
1 domainChain X2view chain
1 domainChain X5view chain
1 domainChain Y2view chain
1 domainChain Y5view chain
1 domainChain Z2view chain
1 domainChain Z5view chain
1 domainAll Domains (95)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A1 | e5m1jA11 | A1:136-277 | eRF1_2 | 2484 → 2484.1 → 2484.1.1 |
| 2 | A1 | e5m1jA12 | A1:278-381 | eRF1_3 | 301 → 301.1 → 301.1.1 |
| 3 | A1 | e5m1jA13 | A1:1-135 | PF26356 | 4 → 4.23 → 4.23.1 |
| 4 | a2 | e5m1ja21 | a2:2-99 | Ribosomal_S26e | 377 → 377.1 → 377.1.1 |
| 5 | A2 | e5m1jA21 | A2:2-208 | Ribosomal_S2 | 2007 → 2007.6 → 2007.6.1 |
| 6 | a5 | e5m1ja51 | a5:2-149 | Ribosomal_L27A | 2490 → 2490.3 → 2490.3.1 |
| 7 | A5 | e5m1jA51 | A5:2-98 | Ribosomal_L2 | 2 → 2.1 → 2.1.1 |
| 8 | A5 | e5m1jA52 | A5:99-253 | Ribosomal_L2_C | 4 → 4.1 → 4.1.1 |
| 9 | A6 | e5m1jA61 | A6:502-611 | GTP-eEF1A_C | 1 → 1.1 → 1.1.8 |
| 10 | A6 | e5m1jA62 | A6:391-501 | GTP_EFTU_D2 | 1 → 1.1 → 1.1.7 |
| 11 | A6 | e5m1jA63 | A6:148-390 | GTP_EFTU | 2004 → 2004.1 → 2004.1.1 |
| 12 | A6 | e5m1jA64 | A6:12-77,A6:139-147 | HBS1_N | 103 → 103.1 → 103.1.1 |
| 13 | b2 | e5m1jb21 | b2:30-82 | Ribosomal_S27e | 375 → 375.1 → 375.1.1 |
| 14 | B2 | e5m1jB21 | B2:20-113 | Ribosomal_S3Ae | 239 → 239.5 → 239.5.1 |
| 15 | B2 | e5m1jB22 | B2:114-233 | Ribosomal_S3Ae | 230 → 230.6 → 230.6.1 |
| 16 | b5 | e5m1jb51 | b5:2-59 | Ribosomal_L29e | 3212 → 3212.1 → 3212.1.1 |
| 17 | B5 | e5m1jB51 | B5:2-366 | Ribosomal_L3 | 1 → 1.1 → 1.1.7 |
| 18 | c2 | e5m1jc21 | c2:5-67 | Ribosomal_S28e | 2 → 2.1 → 2.1.1 |
| 19 | C2 | e5m1jC21 | C2:109-175 | Ribosomal_S5 | 330 → 330.1 → 330.1.1 |
| 20 | C2 | e5m1jC22 | C2:176-250 | Ribosomal_S5_C | 212 → 212.1 → 212.1.1 |
| 21 | C2 | e5m1jC23 | C2:34-108 | Ribosomal_S5 | 3274 → 3274.1 → 3274.1.1 |
| 22 | c5 | e5m1jc51 | c5:9-105 | Ribosomal_L7Ae | 301 → 301.1 → 301.1.1 |
| 23 | C5 | e5m1jC51 | C5:2-269 | Ribosomal_L4 | 7559 → 7559.1 → 7559.1.1 |
| 24 | C5 | e5m1jC52 | C5:270-362 | Ribos_L4_asso_C | 3319 → 3319.1 → 3319.1.1 |
| 25 | d2 | e5m1jd21 | d2:4-56 | Ribosomal_S14 | 377 → 377.1 → 377.1.1 |
| 26 | D2 | e5m1jD21 | D2:92-225 | Ribosomal_S3_C | 230 → 230.2 → 230.2.1 |
| 27 | D2 | e5m1jD22 | D2:3-91 | KH_2 | 327 → 327.11 → 327.11.1 |
| 28 | d5 | e5m1jd51 | d5:4-112 | Ribosomal_L31e | 259 → 259.1 → 259.1.1 |
| 29 | D5 | e5m1jD51 | D5:2-297 | Ribosomal_L18_c,Ribosomal_L5e | 2484 → 2484.1 → 2484.1.1 |
| 30 | e2 | e5m1je21 | e2:2-61 | Ribosomal_S30 | 3168 → 3168.1 → 3168.1.1 |
| 31 | E2 | e5m1jE21 | E2:176-261 | KOW,40S_S4_C | 4 → 4.1 → 4.1.1 |
| 32 | E2 | e5m1jE22 | E2:2-116 | Ribosomal_S4e,S4,RS4NT | 221 → 221.1 → 221.1.2 |
| 33 | E2 | e5m1jE23 | E2:117-175 | Ribosomal_S4e | 2 → 2.1 → 2.1.1 |
| 34 | e5 | e5m1je51 | e5:2-128 | Ribosomal_L32e | 2490 → 2490.1 → 2490.1.1 |
| 35 | E5 | e5m1jE51 | E5:2-176 | Ribosomal_L6e | 4 → 4.1 → 4.1.1 |
| 36 | f2 | e5m1jf21 | f2:82-152 | Ribosomal_S27 | 375 → 375.1 → 375.1.1 |
| 37 | F2 | e5m1jF21 | F2:20-225 | Ribosomal_S7 | 167 → 167.1 → 167.1.1 |
| 38 | f5 | e5m1jf51 | f5:2-107 | Ribosomal_L35Ae | 1 → 1.1 → 1.1.7 |
| 39 | F5 | e5m1jF51 | F5:23-244 | Ribosomal_L30,Ribosomal_L30_N | 887 → 887.1 → 887.1.1 |
| 40 | g2 | e5m1jg21 | g2:2-319 | WD40 | 5 → 5.1 → 5.1.4 |
| 41 | G2 | e5m1jG21 | G2:1-226 | Ribosomal_S6e | 239 → 239.1 → 239.1.1 |
| 42 | g5 | e5m1jg51 | g5:2-113 | Ribosomal_L34e | 377 → 377.12 → 377.12.1 |
| 43 | G5 | e5m1jG51 | G5:24-256 | Ribosomal_L7Ae | 301 → 301.1 → 301.1.1 |
| 44 | H2 | e5m1jH21 | H2:4-105 | Ribosomal_S7e | 327 → 327.18 → 327.18.1 |
| 45 | H2 | e5m1jH22 | H2:106-187 | Ribosomal_S7e | 327 → 327.18 → 327.18.1 |
| 46 | h5 | e5m1jh51 | h5:2-120 | Ribosomal_L29 | 192 → 192.4 → 192.4.1 |
| 47 | H5 | e5m1jH51 | H5:86-191 | Ribosomal_L6 | 318 → 318.1 → 318.1.1 |
| 48 | H5 | e5m1jH52 | H5:1-85 | Ribosomal_L6 | 318 → 318.1 → 318.1.1 |
| 49 | I2 | e5m1jI21 | I2:2-200 | Ribosomal_S8e | 3174 → 3174.1 → 3174.1.1 |
| 50 | i5 | e5m1ji51 | i5:24-100 | Ribosomal_L36e | 3166 → 3166.1 → 3166.1.1 |
| 51 | I5 | e5m1jI51 | I5:2-221 | Ribosomal_L16 | 325 → 325.1 → 325.1.5 |
| 52 | J2 | e5m1jJ21 | J2:2-186 | Ribosomal_S4,S4 | 221 → 221.1 → 221.1.2 |
| 53 | j5 | e5m1jj51 | j5:2-88 | Ribosomal_L37e | 375 → 375.1 → 375.1.1 |
| 54 | J5 | e5m1jJ51 | J5:6-112,J5:132-174 | Ribosomal_L5,Ribosomal_L5_C | 882 → 882.1 → 882.1.1 |
| 55 | K2 | e5m1jK21 | K2:1-74 | S10_plectin | 101 → 101.1 → 101.1.2 |
| 56 | k5 | e5m1jk51 | k5:2-78 | Ribosomal_L38e | 896 → 896.1 → 896.1.1 |
| 57 | K5 | e5m1jK51 | K5:3-199 | Ribosomal_L13 | 2490 → 2490.2 → 2490.2.1 |
| 58 | L2 | e5m1jL21 | L2:2-156 | Ribosomal_S17,Ribosomal_S17_N | 2 → 2.1 → 2.1.1 |
| 59 | l5 | e5m1jl51 | l5:2-51 | Ribosomal_L39 | 585 → 585.1 → 585.1.1 |
| 60 | L5 | e5m1jL51 | L5:2-194 | Ribosomal_L13e | 3210 → 3210.1 → 3210.1.1 |
| 61 | M2 | e5m1jM21 | M2:20-143 | Ribosomal_L7Ae | 301 → 301.1 → 301.1.1 |
| 62 | m5 | e5m1jm51 | m5:77-128 | Ribosomal_L40e | 375 → 375.1 → 375.1.1 |
| 63 | M5 | e5m1jM51 | M5:3-138 | KOW,Ribosomal_L14e | 4 → 4.1 → 4.1.1 |
| 64 | N2 | e5m1jN21 | N2:2-82 | Ribosomal_S13_N | 101 → 101.40 → 101.40.1 |
| 65 | N2 | e5m1jN22 | N2:83-151 | Ribosomal_S15 | 616 → 616.1 → 616.1.1 |
| 66 | n5 | e5m1jn51 | n5:1-25 | Ribosomal_L41 | 6069 → 6069.1 → 6069.1.1 |
| 67 | N5 | e5m1jN51 | N5:2-175 | Ribosomal_L15e | 304 → 304.109 → 304.109.1 |
| 68 | O2 | e5m1jO21 | O2:11-137 | Ribosomal_S11 | 2484 → 2484.1 → 2484.1.1 |
| 69 | o5 | e5m1jo51 | o5:2-106 | Ribosomal_L44 | 375 → 375.1 → 375.1.1 |
| 70 | P2 | e5m1jP21 | P2:8-131 | Ribosomal_S19 | 838 → 838.1 → 838.1.1 |
| 71 | p5 | e5m1jp51 | p5:2-92 | Ribosomal_L37ae | 375 → 375.1 → 375.1.1 |
| 72 | P5 | e5m1jP51 | P5:2-184 | Ribosomal_L22 | 218 → 218.2 → 218.2.1 |
| 73 | Q2 | e5m1jQ21 | Q2:3-143 | Ribosomal_S9 | 212 → 212.1 → 212.1.1 |
| 74 | Q5 | e5m1jQ51 | Q5:2-186 | Ribosomal_L18 | 2490 → 2490.3 → 2490.3.1 |
| 75 | R2 | e5m1jR21 | R2:2-126 | Ribosomal_S17e | 101 → 101.1 → 101.1.17 |
| 76 | R5 | e5m1jR51 | R5:2-56 | Ribosomal_L19e | 637 → 637.1 → 637.1.1 |
| 77 | R5 | e5m1jR52 | R5:57-189 | Ribosomal_L19e_C | 3050 → 3050.1 → 3050.1.1 |
| 78 | S2 | e5m1jS21 | S2:2-66,S2:90-146 | Ribosomal_S13 | 102 → 102.2 → 102.2.1 |
| 79 | S5 | e5m1jS51 | S5:1-69 | 3115.1.1.0 | 3115 → 3115.1 → 3115.1.1 |
| 80 | S5 | e5m1jS52 | S5:70-172 | Ribosomal_L18A | 3115 → 3115.1 → 3115.1.1 |
| 81 | T2 | e5m1jT21 | T2:2-144 | Ribosomal_S19e | 101 → 101.1 → 101.1.2 |
| 82 | T5 | e5m1jT51 | T5:2-160 | Ribosomal_L21e | 4 → 4.1 → 4.1.1 |
| 83 | U2 | e5m1jU21 | U2:15-121 | Ribosomal_S10 | 304 → 304.44 → 304.44.1 |
| 84 | U5 | e5m1jU51 | U5:9-108 | Ribosomal_L22e | 3715 → 3715.1 → 3715.1.1 |
| 85 | V2 | e5m1jV21 | V2:1-87 | Ribosomal_S21e | 3167 → 3167.1 → 3167.1.1 |
| 86 | V5 | e5m1jV51 | V5:2-137 | Ribosomal_L14 | 3174 → 3174.1 → 3174.1.1 |
| 87 | W2 | e5m1jW21 | W2:2-67 | Ribosomal_S8 | 320 → 320.2 → 320.2.1 |
| 88 | W2 | e5m1jW22 | W2:68-130 | Ribosomal_S8 | 4988 → 4988.1 → 4988.1.1 |
| 89 | W5 | e5m1jW51 | W5:1-98 | Ribosomal_L24e | 377 → 377.1 → 377.1.1 |
| 90 | X2 | e5m1jX21 | X2:2-145 | Ribosom_S12_S23 | 2 → 2.1 → 2.1.1 |
| 91 | X5 | e5m1jX51 | X5:22-142 | Ribosomal_L23,Ribosomal_L23eN | 304 → 304.109 → 304.109.1 |
| 92 | Y2 | e5m1jY21 | Y2:2-135 | Ribosomal_S24e | 304 → 304.109 → 304.109.1 |
| 93 | Y5 | e5m1jY51 | Y5:2-127 | KOW, Ribosomal_L26 | 4 → 4.1 → 4.1.1 |
| 94 | Z2 | e5m1jZ21 | Z2:36-105 | Ribosomal_S25 | 101 → 101.1 → 101.1.2 |
| 95 | Z5 | e5m1jZ51 | Z5:2-136 | Ribosomal_L27e | 4 → 4.1 → 4.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors