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PDB 5MDZ

ELECTRON MICROSCOPY0 chains58 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

All Domains (58)

#ChainDomain IDRangeFamilyClassification
1ae5mdza1a:1-66Ribosomal_L314987 → 4987.1 → 4987.1.1
2be5mdzb1b:2-57Ribosomal_L32p375 → 375.1 → 375.1.1
3Be5mdzB1B:2-125Ribosomal_L22 → 2.1 → 2.1.1
4Be5mdzB2B:126-272Ribosomal_L2_C4 → 4.1 → 4.1.1
5ce5mdzc1c:4-55Ribosomal_L33375 → 375.1 → 375.1.1
6Ce5mdzC1C:1-209Ribosomal_L31 → 1.1 → 1.1.7
7de5mdzd1d:1-46Ribosomal_L343074 → 3074.1 → 3074.1.1
8De5mdzD1D:1-201Ribosomal_L47559 → 7559.1 → 7559.1.1
9ee5mdze1e:2-65Ribosomal_L35p4281 → 4281.1 → 4281.1.1
10Ee5mdzE1E:2-178Ribosomal_L5,Ribosomal_L5_C882 → 882.1 → 882.1.1
11fe5mdzf1f:1-38Ribosomal_L36919 → 919.1 → 919.1.1
12Fe5mdzF1F:83-176Ribosomal_L6318 → 318.1 → 318.1.1
13Fe5mdzF2F:2-82Ribosomal_L6318 → 318.1 → 318.1.1
14ge5mdzg1g:3-227Ribosomal_S22007 → 2007.6 → 2007.6.1
15Ge5mdzG2G:1-55Ribosomal_L9_N4076 → 4076.1 → 4076.1.1
16Ge5mdzG3G:56-149Ribosomal_L9_C523 → 523.1 → 523.1.1
17he5mdzh1h:106-209Ribosomal_S3_C230 → 230.2 → 230.2.1
18he5mdzh2h:2-105KH_2327 → 327.11 → 327.11.1
19He5mdzH1H:2-131Ribosomal_L10304 → 304.60 → 304.60.1
20ie5mdzi1i:2-206Ribosomal_S4,S4221 → 221.1 → 221.1.2
21Ie5mdzI1I:72-139Ribosomal_L11101 → 101.1 → 101.1.16
22Ie5mdzI2I:5-71Ribosomal_L11_N3781 → 3781.1 → 3781.1.1
23je5mdzj1j:10-78Ribosomal_S5330 → 330.1 → 330.1.1
24je5mdzj2j:79-165Ribosomal_S5_C212 → 212.1 → 212.1.1
25Je5mdzJ1J:1-142Ribosomal_L132490 → 2490.2 → 2490.2.1
26ke5mdzk1k:1-104Ribosomal_S6304 → 304.12 → 304.12.1
27Ke5mdzK1K:1-123Ribosomal_L143174 → 3174.1 → 3174.1.1
28le5mdzl1l:2-152Ribosomal_S7167 → 167.1 → 167.1.1
29Le5mdzL1L:1-144Ribosomal_L27A, PF294712490 → 2490.3 → 2490.3.1
30me5mdzm1m:2-66Ribosomal_S8320 → 320.2 → 320.2.1
31me5mdzm2m:67-130Ribosomal_S84988 → 4988.1 → 4988.1.1
32Me5mdzM1M:1-136325.1.5.0325 → 325.1 → 325.1.5
33ne5mdzn1n:4-130Ribosomal_S9212 → 212.1 → 212.1.1
34Ne5mdzN1N:1-119Ribosomal_L17218 → 218.3 → 218.3.1
35oe5mdzo1o:5-103Ribosomal_S10304 → 304.44 → 304.44.1
36Oe5mdzO1O:2-117Ribosomal_L18p2484 → 2484.1 → 2484.1.1
37pe5mdzp1p:13-129Ribosomal_S112484 → 2484.1 → 2484.1.1
38Pe5mdzP1P:2-115Ribosomal_L194 → 4.1 → 4.1.1
39qe5mdzq1q:2-124Ribosom_S12_S232 → 2.1 → 2.1.1
40Qe5mdzQ1Q:2-118Ribosomal_L20143 → 143.2 → 143.2.1
41re5mdzr1r:2-117Ribosomal_S13102 → 102.2 → 102.2.1
42Re5mdzR1R:1-103Ribosomal_L21p4186 → 4186.1 → 4186.1.1
43se5mdzs1s:2-101Ribosomal_S14377 → 377.1 → 377.1.1
44Se5mdzS1S:1-110Ribosomal_L22218 → 218.2 → 218.2.1
45te5mdzt1t:2-89Ribosomal_S15616 → 616.1 → 616.1.1
46Te5mdzT1T:1-94Ribosomal_L23304 → 304.109 → 304.109.1
47ue5mdzu1u:1-82Ribosomal_S16837 → 837.1 → 837.1.1
48Ue5mdzU1U:2-104KOW,ribosomal_L244 → 4.1 → 4.1.1
49ve5mdzv1v:4-83Ribosomal_S172 → 2.1 → 2.1.1
50Ve5mdzV1V:1-94Ribosomal_L25p239 → 239.1 → 239.1.1
51we5mdzw1w:10-75Ribosomal_S18101 → 101.1 → 101.1.1
52We5mdzW1W:10-85325.1.8.0325 → 325.1 → 325.1.8
53xe5mdzx1x:2-84Ribosomal_S19838 → 838.1 → 838.1.1
54Xe5mdzX1X:2-78Ribosomal_L284232 → 4232.1 → 4232.1.1
55ye5mdzy1y:2-87Ribosomal_S20p604 → 604.9 → 604.9.1
56Ye5mdzY1Y:2-63Ribosomal_L29192 → 192.4 → 192.4.1
57ze5mdzz1z:2-71Ribosomal_S213666 → 3666.1 → 3666.1.1
58Ze5mdzZ1Z:2-59Ribosomal_L30887 → 887.1 → 887.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors