PDB 5MPS
ELECTRON MICROSCOPY0 chains34 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain aview chain
1 domainChain Aview chain
5 domainsChain bview chain
1 domainChain cview chain
1 domainChain Cview chain
6 domainsChain dview chain
1 domainChain eview chain
1 domainChain fview chain
1 domainChain gview chain
1 domainChain hview chain
1 domainChain jview chain
1 domainChain Jview chain
1 domainChain Lview chain
1 domainChain Mview chain
2 domainsChain Nview chain
2 domainsChain oview chain
1 domainChain Oview chain
2 domainsChain Rview chain
1 domainChain Sview chain
1 domainChain Tview chain
1 domainAll Domains (34)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | a | e5mpsa1 | a:76-188,a:222-247 | 544.1.1.0 | 544 → 544.1 → 544.1.1 |
| 2 | A | e5mpsA1 | A:127-428,A:456-883 | PRO8NT,PROCN | 1038 → 1038.1 → 1038.1.1 |
| 3 | A | e5mpsA2 | A:884-1255 | RRM_4 | 304 → 304.48 → 304.48.1 |
| 4 | A | e5mpsA3 | A:1256-1575 | U6-snRNA_bdg,U5_2-snRNA_bdg | 4967 → 4967.1 → 4967.1.1 |
| 5 | A | e5mpsA4 | A:1829-2100 | PRP8_domainIV | 2484 → 2484.1 → 2484.1.1 |
| 6 | A | e5mpsA5 | A:1600-1828 | U6-snRNA_bdg | 2008 → 2008.1 → 2008.1.1 |
| 7 | b | e5mpsb1 | b:4-55,b:75-102 | LSM | 4 → 4.1 → 4.1.1 |
| 8 | c | e5mpsc1 | c:246-342 | Slu7 | 7101 → 7101.1 → 7101.1.1 |
| 9 | C | e5mpsC1 | C:594-693 | 304.24.1.0 | 304 → 304.24 → 304.24.1 |
| 10 | C | e5mpsC2 | C:856-977 | EFG_C | 304 → 304.24 → 304.24.1 |
| 11 | C | e5mpsC3 | C:708-855 | EFG_IV | 212 → 212.1 → 212.1.1 |
| 12 | C | e5mpsC4 | C:443-508,C:529-593 | 1.1.7.0 | 1 → 1.1 → 1.1.7 |
| 13 | C | e5mpsC5 | C:118-442 | GTP_EFTU | 2004 → 2004.1 → 2004.1.1 |
| 14 | C | e5mpsC6 | C:978-997 | 304.24.1.0 | 304 → 304.24 → 304.24.1 |
| 15 | d | e5mpsd1 | d:4-85 | LSM | 4 → 4.1 → 4.1.1 |
| 16 | e | e5mpse1 | e:10-92 | LSM | 4 → 4.1 → 4.1.1 |
| 17 | f | e5mpsf1 | f:12-83 | LSM | 4 → 4.1 → 4.1.1 |
| 18 | g | e5mpsg1 | g:2-76 | LSM | 4 → 4.1 → 4.1.1 |
| 19 | h | e5mpsh1 | h:1-48,h:76-109 | LSM | 4 → 4.1 → 4.1.1 |
| 20 | H | e5mpsH1 | H:250-262,H:289-481 | MA3 | 109 → 109.4 → 109.4.1 |
| 21 | H | e5mpsH2 | H:11-207,H:245-249 | 109.4.1.0 | 109 → 109.4 → 109.4.1 |
| 22 | j | e5mpsj1 | j:15-108 | LSM | 4 → 4.1 → 4.1.1 |
| 23 | J | e5mpsJ1 | J:135-451 | WD40, Beta-prop_NOL10_N | 5 → 5.1 → 5.1.4 |
| 24 | L | e5mpsL1 | L:2-156 | BUD31 | 3952 → 3952.1 → 3952.1.1 |
| 25 | M | e5mpsM1 | M:130-227 | RRM_1 | 304 → 304.9 → 304.9.1 |
| 26 | M | e5mpsM2 | M:3-129 | Torus | 906 → 906.1 → 906.1.1 |
| 27 | N | e5mpsN1 | N:198-266,N:288-295,N:306-324 | 304.9.1.0 | 304 → 304.9 → 304.9.1 |
| 28 | N | e5mpsN2 | N:4-144 | STL11_N | 376 → 376.1 → 376.1.3 |
| 29 | o | e5mpso1 | o:155-454 | WD40 | 5 → 5.1 → 5.1.4 |
| 30 | O | e5mpsO1 | O:13-58 | Myb_DNA-binding | 101 → 101.1 → 101.1.1 |
| 31 | O | e5mpsO2 | O:62-109,O:230-252 | Myb_DNA-binding | 101 → 101.1 → 101.1.1 |
| 32 | R | e5mpsR1 | R:2-116 | cwf21 | 6026 → 6026.1 → 6026.1.1 |
| 33 | S | e5mpsS1 | S:36-556 | HAT, HAT_Syf1_CNRKL1_N, HAT_PRP39_N | 109 → 109.4 → 109.4.1 |
| 34 | T | e5mpsT1 | T:407-790,T:1000-1017 | HAT_Syf1_CNRKL1_C | 109 → 109.4 → 109.4.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors