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PDB 5MQF

ELECTRON MICROSCOPY0 chains57 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

All Domains (57)

#ChainDomain IDRangeFamilyClassification
1ae5mqfa1a:20-118LSM4 → 4.1 → 4.1.1
2Ae5mqfA1A:1183-1502U6-snRNA_bdg,U5_2-snRNA_bdg4967 → 4967.1 → 4967.1.1
3Ae5mqfA2A:1757-1990PRP8_domainIV2484 → 2484.1 → 2484.1.1
4Ae5mqfA3A:1503-1756U6-snRNA_bdg2008 → 2008.1 → 2008.1.1
5Ae5mqfA4A:26-811PRO8NT,PROCN1038 → 1038.1 → 1038.1.1
6Ae5mqfA5A:812-1182RRM_4304 → 304.48 → 304.48.1
7be5mqfb1b:2-77LSM4 → 4.1 → 4.1.1
8Be5mqfB1B:829-957EFG_C304 → 304.24 → 304.24.1
9Be5mqfB2B:581-659EFG_III304 → 304.24 → 304.24.1
10Be5mqfB3B:660-828EFG_IV212 → 212.1 → 212.1.1
11Be5mqfB4B:114-439GTP_EFTU2004 → 2004.1 → 2004.1.1
12Be5mqfB5B:440-580GTP_EFTU_D21 → 1.1 → 1.1.7
13ce5mqfc1c:14-92LSM4 → 4.1 → 4.1.1
14de5mqfd1d:3-76LSM4 → 4.1 → 4.1.1
15De5mqfD1D:186-500WD405 → 5.1 → 5.1.4
16ee5mqfe1e:2-85LSM4 → 4.1 → 4.1.1
17Ee5mqfE1E:273-579WD405 → 5.1 → 5.1.4
18fe5mqff1f:4-87LSM4 → 4.1 → 4.1.1
19Fe5mqfF1F:51-357WD40, Beta-prop_NOL10_N5 → 5.1 → 5.1.4
20ge5mqfg1g:1-82LSM4 → 4.1 → 4.1.1
21Ge5mqfG1G:68-134,G:195-504WD40, Prp19, WD40_Prp195 → 5.1 → 5.1.4
22he5mqfh1h:19-116LSM4 → 4.1 → 4.1.1
23He5mqfH1H:68-134,H:195-504WD40, Prp19, WD40_Prp195 → 5.1 → 5.1.4
24ie5mqfi1i:2-75LSM4 → 4.1 → 4.1.1
25Ie5mqfI1I:68-134,I:195-504WD40, Prp19, WD40_Prp195 → 5.1 → 5.1.4
26je5mqfj1j:14-92LSM4 → 4.1 → 4.1.1
27Je5mqfJ1J:68-134,J:195-504WD40, Prp19, WD40_Prp195 → 5.1 → 5.1.4
28ke5mqfk1k:3-76LSM4 → 4.1 → 4.1.1
29le5mqfl1l:2-84LSM4 → 4.1 → 4.1.1
30Le5mqfL1L:8-64Myb_DNA-binding101 → 101.1 → 101.1.1
31Le5mqfL2L:62-110Myb_DNA-binding101 → 101.1 → 101.1.1
32me5mqfm1m:4-87LSM4 → 4.1 → 4.1.1
33Me5mqfM1M:33-738TPR_8, HAT_Syf1_M, HAT_Syf1_CNRKL1_C, HAT_Syf1_CNRKL1_N, HAT_PRP39_N109 → 109.4 → 109.4.1
34ne5mqfn1n:1-82LSM4 → 4.1 → 4.1.1
35oe5mqfo1o:142-299Pro_isomerase75 → 75.1 → 75.1.1
36oe5mqfo2o:7-82RRM_1304 → 304.9 → 304.9.1
37Oe5mqfO1O:214-802HAT, HAT_Syf1_CNRKL1_C, HAT_Syf1_CNRKL1_N, HAT_PRP39_C, PF29376109 → 109.4 → 109.4.1
38pe5mqfp1p:244-403Helicase_C2004 → 2004.1 → 2004.1.1
39pe5mqfp2p:39-243DEAD2004 → 2004.1 → 2004.1.1
40Pe5mqfP1P:227-308RRM_1304 → 304.9 → 304.9.1
41Pe5mqfP2P:19-89STL11_N376 → 376.1 → 376.1.3
42Pe5mqfP3P:90-218zf-CCCH_RBM22906 → 906.1 → 906.1.1
43qe5mqfq1q:1096-1183BOB_NTP_bind2 → 2.1 → 2.1.1
44qe5mqfq2q:742-917Helicase_C2004 → 2004.1 → 2004.1.1
45qe5mqfq3q:918-1095HA2_N,HA2_C4156 → 4156.1 → 4156.1.1
46qe5mqfq4q:560-741DEAD2004 → 2004.1 → 2004.1.1
47Qe5mqfQ1Q:3-144BUD313952 → 3952.1 → 3952.1.1
48Te5mqfT1T:452-647MA3109 → 109.4 → 109.4.1
49Te5mqfT2T:149-345,T:450-451MIF4G109 → 109.4 → 109.4.1
50Ue5mqfU1U:19-415Aquarius_N_1st109 → 109.4 → 109.4.1
51Ue5mqfU2U:1135-1333AAA_122004 → 2004.1 → 2004.1.1
52Ue5mqfU3U:416-492,U:660-706,U:795-1134ResIII, AAA_112004 → 2004.1 → 2004.1.1
53Ue5mqfU4U:493-659Aquarius_N_2nd1 → 1.1 → 1.1.7
54Ue5mqfU5U:707-753,U:773-794Aquarius_N_3rd3940 → 3940.1 → 3940.1.1
55Ve5mqfV1V:11-165Pro_isomerase75 → 75.1 → 75.1.1
56We5mqfW1W:2-163LRR_9207 → 207.1 → 207.1.1
57Xe5mqfX1X:6-99RRM_1304 → 304.9 → 304.9.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors