PDB 5MQF
ELECTRON MICROSCOPY0 chains57 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain aview chain
1 domainChain Aview chain
5 domainsChain bview chain
1 domainChain Bview chain
5 domainsChain cview chain
1 domainChain dview chain
1 domainChain Dview chain
1 domainChain eview chain
1 domainChain Eview chain
1 domainChain fview chain
1 domainChain Fview chain
1 domainChain gview chain
1 domainChain Gview chain
1 domainChain hview chain
1 domainChain Hview chain
1 domainChain iview chain
1 domainChain Iview chain
1 domainChain jview chain
1 domainChain Jview chain
1 domainChain kview chain
1 domainChain lview chain
1 domainChain Lview chain
2 domainsChain mview chain
1 domainChain Mview chain
1 domainChain nview chain
1 domainChain oview chain
2 domainsChain Oview chain
1 domainChain pview chain
2 domainsChain Pview chain
3 domainsChain qview chain
4 domainsChain Qview chain
1 domainChain Tview chain
2 domainsChain Uview chain
5 domainsChain Vview chain
1 domainChain Wview chain
1 domainChain Xview chain
1 domainAll Domains (57)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | a | e5mqfa1 | a:20-118 | LSM | 4 → 4.1 → 4.1.1 |
| 2 | A | e5mqfA1 | A:1183-1502 | U6-snRNA_bdg,U5_2-snRNA_bdg | 4967 → 4967.1 → 4967.1.1 |
| 3 | A | e5mqfA2 | A:1757-1990 | PRP8_domainIV | 2484 → 2484.1 → 2484.1.1 |
| 4 | A | e5mqfA3 | A:1503-1756 | U6-snRNA_bdg | 2008 → 2008.1 → 2008.1.1 |
| 5 | A | e5mqfA4 | A:26-811 | PRO8NT,PROCN | 1038 → 1038.1 → 1038.1.1 |
| 6 | A | e5mqfA5 | A:812-1182 | RRM_4 | 304 → 304.48 → 304.48.1 |
| 7 | b | e5mqfb1 | b:2-77 | LSM | 4 → 4.1 → 4.1.1 |
| 8 | B | e5mqfB1 | B:829-957 | EFG_C | 304 → 304.24 → 304.24.1 |
| 9 | B | e5mqfB2 | B:581-659 | EFG_III | 304 → 304.24 → 304.24.1 |
| 10 | B | e5mqfB3 | B:660-828 | EFG_IV | 212 → 212.1 → 212.1.1 |
| 11 | B | e5mqfB4 | B:114-439 | GTP_EFTU | 2004 → 2004.1 → 2004.1.1 |
| 12 | B | e5mqfB5 | B:440-580 | GTP_EFTU_D2 | 1 → 1.1 → 1.1.7 |
| 13 | c | e5mqfc1 | c:14-92 | LSM | 4 → 4.1 → 4.1.1 |
| 14 | d | e5mqfd1 | d:3-76 | LSM | 4 → 4.1 → 4.1.1 |
| 15 | D | e5mqfD1 | D:186-500 | WD40 | 5 → 5.1 → 5.1.4 |
| 16 | e | e5mqfe1 | e:2-85 | LSM | 4 → 4.1 → 4.1.1 |
| 17 | E | e5mqfE1 | E:273-579 | WD40 | 5 → 5.1 → 5.1.4 |
| 18 | f | e5mqff1 | f:4-87 | LSM | 4 → 4.1 → 4.1.1 |
| 19 | F | e5mqfF1 | F:51-357 | WD40, Beta-prop_NOL10_N | 5 → 5.1 → 5.1.4 |
| 20 | g | e5mqfg1 | g:1-82 | LSM | 4 → 4.1 → 4.1.1 |
| 21 | G | e5mqfG1 | G:68-134,G:195-504 | WD40, Prp19, WD40_Prp19 | 5 → 5.1 → 5.1.4 |
| 22 | h | e5mqfh1 | h:19-116 | LSM | 4 → 4.1 → 4.1.1 |
| 23 | H | e5mqfH1 | H:68-134,H:195-504 | WD40, Prp19, WD40_Prp19 | 5 → 5.1 → 5.1.4 |
| 24 | i | e5mqfi1 | i:2-75 | LSM | 4 → 4.1 → 4.1.1 |
| 25 | I | e5mqfI1 | I:68-134,I:195-504 | WD40, Prp19, WD40_Prp19 | 5 → 5.1 → 5.1.4 |
| 26 | j | e5mqfj1 | j:14-92 | LSM | 4 → 4.1 → 4.1.1 |
| 27 | J | e5mqfJ1 | J:68-134,J:195-504 | WD40, Prp19, WD40_Prp19 | 5 → 5.1 → 5.1.4 |
| 28 | k | e5mqfk1 | k:3-76 | LSM | 4 → 4.1 → 4.1.1 |
| 29 | l | e5mqfl1 | l:2-84 | LSM | 4 → 4.1 → 4.1.1 |
| 30 | L | e5mqfL1 | L:8-64 | Myb_DNA-binding | 101 → 101.1 → 101.1.1 |
| 31 | L | e5mqfL2 | L:62-110 | Myb_DNA-binding | 101 → 101.1 → 101.1.1 |
| 32 | m | e5mqfm1 | m:4-87 | LSM | 4 → 4.1 → 4.1.1 |
| 33 | M | e5mqfM1 | M:33-738 | TPR_8, HAT_Syf1_M, HAT_Syf1_CNRKL1_C, HAT_Syf1_CNRKL1_N, HAT_PRP39_N | 109 → 109.4 → 109.4.1 |
| 34 | n | e5mqfn1 | n:1-82 | LSM | 4 → 4.1 → 4.1.1 |
| 35 | o | e5mqfo1 | o:142-299 | Pro_isomerase | 75 → 75.1 → 75.1.1 |
| 36 | o | e5mqfo2 | o:7-82 | RRM_1 | 304 → 304.9 → 304.9.1 |
| 37 | O | e5mqfO1 | O:214-802 | HAT, HAT_Syf1_CNRKL1_C, HAT_Syf1_CNRKL1_N, HAT_PRP39_C, PF29376 | 109 → 109.4 → 109.4.1 |
| 38 | p | e5mqfp1 | p:244-403 | Helicase_C | 2004 → 2004.1 → 2004.1.1 |
| 39 | p | e5mqfp2 | p:39-243 | DEAD | 2004 → 2004.1 → 2004.1.1 |
| 40 | P | e5mqfP1 | P:227-308 | RRM_1 | 304 → 304.9 → 304.9.1 |
| 41 | P | e5mqfP2 | P:19-89 | STL11_N | 376 → 376.1 → 376.1.3 |
| 42 | P | e5mqfP3 | P:90-218 | zf-CCCH_RBM22 | 906 → 906.1 → 906.1.1 |
| 43 | q | e5mqfq1 | q:1096-1183B | OB_NTP_bind | 2 → 2.1 → 2.1.1 |
| 44 | q | e5mqfq2 | q:742-917 | Helicase_C | 2004 → 2004.1 → 2004.1.1 |
| 45 | q | e5mqfq3 | q:918-1095 | HA2_N,HA2_C | 4156 → 4156.1 → 4156.1.1 |
| 46 | q | e5mqfq4 | q:560-741 | DEAD | 2004 → 2004.1 → 2004.1.1 |
| 47 | Q | e5mqfQ1 | Q:3-144 | BUD31 | 3952 → 3952.1 → 3952.1.1 |
| 48 | T | e5mqfT1 | T:452-647 | MA3 | 109 → 109.4 → 109.4.1 |
| 49 | T | e5mqfT2 | T:149-345,T:450-451 | MIF4G | 109 → 109.4 → 109.4.1 |
| 50 | U | e5mqfU1 | U:19-415 | Aquarius_N_1st | 109 → 109.4 → 109.4.1 |
| 51 | U | e5mqfU2 | U:1135-1333 | AAA_12 | 2004 → 2004.1 → 2004.1.1 |
| 52 | U | e5mqfU3 | U:416-492,U:660-706,U:795-1134 | ResIII, AAA_11 | 2004 → 2004.1 → 2004.1.1 |
| 53 | U | e5mqfU4 | U:493-659 | Aquarius_N_2nd | 1 → 1.1 → 1.1.7 |
| 54 | U | e5mqfU5 | U:707-753,U:773-794 | Aquarius_N_3rd | 3940 → 3940.1 → 3940.1.1 |
| 55 | V | e5mqfV1 | V:11-165 | Pro_isomerase | 75 → 75.1 → 75.1.1 |
| 56 | W | e5mqfW1 | W:2-163 | LRR_9 | 207 → 207.1 → 207.1.1 |
| 57 | X | e5mqfX1 | X:6-99 | RRM_1 | 304 → 304.9 → 304.9.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors