PDB 5MY1
ELECTRON MICROSCOPY0 chains47 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Bview chain
1 domainChain Cview chain
2 domainsChain Dview chain
1 domainChain Eview chain
2 domainsChain Fview chain
1 domainChain Gview chain
1 domainChain Hview chain
2 domainsChain Iview chain
1 domainChain Jview chain
1 domainChain Kview chain
1 domainChain Lview chain
1 domainChain Mview chain
1 domainChain Nview chain
1 domainChain Oview chain
1 domainChain Pview chain
1 domainChain Qview chain
1 domainChain Rview chain
1 domainChain Sview chain
1 domainChain Tview chain
1 domainChain Uview chain
1 domainChain Vview chain
2 domainsChain Wview chain
2 domainsChain Xview chain
10 domainsChain Yview chain
9 domainsChain Zview chain
1 domainAll Domains (47)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | B | e5my1B1 | B:8-225 | Ribosomal_S2 | 2007 → 2007.6 → 2007.6.1 |
| 2 | C | e5my1C1 | C:106-206 | Ribosomal_S3_C | 230 → 230.2 → 230.2.1 |
| 3 | C | e5my1C2 | C:1-105 | KH_2 | 327 → 327.11 → 327.11.1 |
| 4 | D | e5my1D1 | D:1-205 | Ribosomal_S4,S4 | 221 → 221.1 → 221.1.2 |
| 5 | E | e5my1E1 | E:9-77 | Ribosomal_S5 | 330 → 330.1 → 330.1.1 |
| 6 | E | e5my1E2 | E:78-158 | Ribosomal_S5_C | 212 → 212.1 → 212.1.1 |
| 7 | F | e5my1F1 | F:1-100 | Ribosomal_S6 | 304 → 304.12 → 304.12.1 |
| 8 | G | e5my1G1 | G:2-151 | Ribosomal_S7 | 167 → 167.1 → 167.1.1 |
| 9 | H | e5my1H1 | H:66-129 | Ribosomal_S8 | 4988 → 4988.1 → 4988.1.1 |
| 10 | H | e5my1H2 | H:1-65 | Ribosomal_S8 | 320 → 320.2 → 320.2.1 |
| 11 | I | e5my1I1 | I:3-129 | Ribosomal_S9 | 212 → 212.1 → 212.1.1 |
| 12 | J | e5my1J1 | J:5-102 | Ribosomal_S10 | 304 → 304.44 → 304.44.1 |
| 13 | K | e5my1K1 | K:12-128 | Ribosomal_S11 | 2484 → 2484.1 → 2484.1.1 |
| 14 | L | e5my1L1 | L:1-123 | Ribosom_S12_S23 | 2 → 2.1 → 2.1.1 |
| 15 | M | e5my1M1 | M:1-114 | Ribosomal_S13 | 102 → 102.2 → 102.2.1 |
| 16 | N | e5my1N1 | N:1-100 | Ribosomal_S14 | 377 → 377.1 → 377.1.1 |
| 17 | O | e5my1O1 | O:1-88 | Ribosomal_S15 | 616 → 616.1 → 616.1.1 |
| 18 | P | e5my1P1 | P:1-82 | Ribosomal_S16 | 837 → 837.1 → 837.1.1 |
| 19 | Q | e5my1Q1 | Q:3-82 | Ribosomal_S17 | 2 → 2.1 → 2.1.1 |
| 20 | R | e5my1R1 | R:19-73 | Ribosomal_S18 | 101 → 101.1 → 101.1.1 |
| 21 | S | e5my1S1 | S:2-80 | Ribosomal_S19 | 838 → 838.1 → 838.1.1 |
| 22 | T | e5my1T1 | T:2-86 | Ribosomal_S20p | 604 → 604.9 → 604.9.1 |
| 23 | U | e5my1U1 | U:3-53 | Ribosomal_S21 | 3666 → 3666.1 → 3666.1.1 |
| 24 | V | e5my1V1 | V:10-52,V:174-234 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 25 | V | e5my1V2 | V:53-173 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 26 | W | e5my1W1 | W:4-52,W:174-232 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 27 | W | e5my1W2 | W:53-173 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 28 | X | e5my1X1 | X:235-288 | 275.1.1.0 | 275 → 275.1 → 275.1.1 |
| 29 | X | e5my1X2 | X:152-225,X:343-451 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 30 | X | e5my1X3 | X:1240-1341 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 31 | X | e5my1X4 | X:791-827,X:1063-1239 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 32 | X | e5my1X5 | X:578-712 | RNA_pol_Rpb2_45 | 4042 → 4042.1 → 4042.1.1 |
| 33 | X | e5my1X6 | X:3-151,X:452-577 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 34 | X | e5my1X7 | X:713-790 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 35 | X | e5my1X8 | X:828-938,X:1045-1062 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 36 | X | e5my1X9 | X:226-234,X:289-342 | 275.1.1.0 | 275 → 275.1 → 275.1.1 |
| 37 | X | e5my1X10 | X:939-983,X:1004-1044 | 3681.1.1.0 | 3681 → 3681.1 → 3681.1.1 |
| 38 | Y | e5my1Y1 | Y:1-341 | 4246.1.1.0 | 4246 → 4246.1 → 4246.1.1 |
| 39 | Y | e5my1Y2 | Y:895-931,Y:1214-1376 | RNA_pol_Rpb1_5 | 4954 → 4954.1 → 4954.1.1 |
| 40 | Y | e5my1Y4 | Y:932-1022 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 41 | Y | e5my1Y5 | Y:334-498 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 42 | Y | e5my1Y6 | Y:1023-1131 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 43 | Y | e5my1Y7 | Y:811-894 | 275.1.1.0 | 275 → 275.1 → 275.1.1 |
| 44 | Y | e5my1Y8 | Y:639-810 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 45 | Y | e5my1Y9 | Y:499-638 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 46 | Y | e5my1Y10 | Y:1134-1215 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 47 | Z | e5my1Z1 | Z:5-83 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.2 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors