PDB 5N5Z
ELECTRON MICROSCOPY0 chains33 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Aview chain
9 domainsChain Bview chain
7 domainsChain Cview chain
2 domainsChain Dview chain
1 domainChain Eview chain
2 domainsChain Fview chain
1 domainChain Gview chain
2 domainsChain Hview chain
1 domainChain Iview chain
2 domainsChain Jview chain
1 domainChain Kview chain
1 domainChain Lview chain
1 domainChain Mview chain
1 domainChain Nview chain
1 domainChain Oview chain
1 domainAll Domains (33)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e5n5zA1 | A:506-580 | RNA_pol_Rpb1_2 | 275 → 275.1 → 275.1.1 |
| 2 | A | e5n5zA2 | A:1054-1180 | 4957.2.1.0 | 4957 → 4957.2 → 4957.2.1 |
| 3 | A | e5n5zA3 | A:1181-1234,A:1545-1662 | RNA_pol_Rpb1_5 | 4954 → 4954.1 → 4954.1.1 |
| 4 | A | e5n5zA4 | A:1262-1339,A:1440-1497 | 4955.1.1.0 | 4955 → 4955.1 → 4955.1.1 |
| 5 | A | e5n5zA5 | A:464-505,A:581-665 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 6 | A | e5n5zA6 | A:666-826 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 7 | A | e5n5zA7 | A:1235-1261,A:1498-1544 | 4956.1.1.0 | 4956 → 4956.1 → 4956.1.1 |
| 8 | A | e5n5zA8 | A:827-1053 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 9 | A | e5n5zA9 | A:1-141,A:174-273,A:312-463 | RNA_pol_Rpb1_1 | 4246 → 4246.1 → 4246.1.1 |
| 10 | B | e5n5zB1 | B:210-400 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 11 | B | e5n5zB2 | B:548-646 | RNA_pol_Rpa2_4 | 4961 → 4961.1 → 4961.1.1 |
| 12 | B | e5n5zB3 | B:14-209,B:401-547 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 13 | B | e5n5zB4 | B:762-798,B:912-1040 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 14 | B | e5n5zB5 | B:647-761 | 4042.1.1.0 | 4042 → 4042.1 → 4042.1.1 |
| 15 | B | e5n5zB6 | B:1041-1203 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 16 | B | e5n5zB7 | B:799-911 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 17 | C | e5n5zC1 | C:31-75,C:222-335 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 18 | C | e5n5zC2 | C:76-221 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 19 | D | e5n5zD1 | D:12-48,D:80-100 | RNA_polI_A14 | 102 → 102.1 → 102.1.1 |
| 20 | E | e5n5zE1 | E:144-215 | RNA_pol_Rpb5_C | 840 → 840.1 → 840.1.1 |
| 21 | E | e5n5zE2 | E:4-143 | RNA_pol_Rpb5_N | 2008 → 2008.3 → 2008.3.1 |
| 22 | F | e5n5zF1 | F:55-154 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.1 |
| 23 | G | e5n5zG1 | G:14-126 | SHS2_Rpb7-N | 872 → 872.1 → 872.1.1 |
| 24 | G | e5n5zG2 | G:126-170,G:215-250 | RPA43_OB | 2 → 2.1 → 2.1.1 |
| 25 | H | e5n5zH1 | H:3-146 | RNA_pol_Rpb8 | 2 → 2.1 → 2.1.1 |
| 26 | I | e5n5zI1 | I:2-67 | RNA_POL_M_15KD | 375 → 375.1 → 375.1.1 |
| 27 | I | e5n5zI2 | I:68-124 | TFIIS_C | 375 → 375.1 → 375.1.1 |
| 28 | J | e5n5zJ1 | J:1-69 | RNA_pol_N | 101 → 101.4 → 101.4.1 |
| 29 | K | e5n5zK1 | K:42-142 | RNA_pol_L_2 | 305 → 305.1 → 305.1.1 |
| 30 | L | e5n5zL1 | L:27-70 | DNA_RNApol_7kD | 375 → 375.1 → 375.1.1 |
| 31 | M | e5n5zM1 | M:8-115 | RNA_pol_I_A49 | 59 → 59.1 → 59.1.3 |
| 32 | N | e5n5zN1 | N:24-180 | RNA_polI_A34 | 59 → 59.1 → 59.1.3 |
| 33 | O | e5n5zO1 | O:48-248,O:324-553,O:575-616 | RRN3 | 109 → 109.4 → 109.4.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors