PDB 5N61
ELECTRON MICROSCOPY0 chains34 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Aview chain
11 domainsChain Bview chain
7 domainsChain Cview chain
2 domainsChain Dview chain
1 domainChain Eview chain
2 domainsChain Fview chain
1 domainChain Gview chain
2 domainsChain Hview chain
1 domainChain Iview chain
1 domainChain Jview chain
1 domainChain Kview chain
1 domainChain Lview chain
1 domainChain Mview chain
1 domainChain Nview chain
1 domainChain Oview chain
1 domainAll Domains (34)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e5n61A1 | A:1336-1337,A:1441-1463 | 4956.1.1.0 | 4956 → 4956.1 → 4956.1.1 |
| 2 | A | e5n61A2 | A:1-141,A:174-268,A:312-464 | RNA_pol_Rpb1_1 | 4246 → 4246.1 → 4246.1.1 |
| 3 | A | e5n61A3 | A:1054-1180 | 4957.2.1.0 | 4957 → 4957.2 → 4957.2.1 |
| 4 | A | e5n61A4 | A:516-665 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 5 | A | e5n61A5 | A:1485-1548 | 4956.1.1.0 | 4956 → 4956.1 → 4956.1.1 |
| 6 | A | e5n61A6 | A:666-826 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 7 | A | e5n61A7 | A:465-515 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 8 | A | e5n61A9 | A:827-1053 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 9 | A | e5n61A10 | A:1181-1229,A:1549-1662 | RNA_pol_Rpb1_5 | 4954 → 4954.1 → 4954.1.1 |
| 10 | A | e5n61A11 | A:1230-1265 | 4956.1.1.0 | 4956 → 4956.1 → 4956.1.1 |
| 11 | A | e5n61A8 | A:1266-1332 | 4954.1.1.0 | 4954 → 4954.1 → 4954.1.1 |
| 12 | B | e5n61B1 | B:647-761 | 4042.1.1.0 | 4042 → 4042.1 → 4042.1.1 |
| 13 | B | e5n61B2 | B:762-798,B:912-1040 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 14 | B | e5n61B3 | B:548-646 | RNA_pol_Rpa2_4 | 4961 → 4961.1 → 4961.1.1 |
| 15 | B | e5n61B4 | B:13-209,B:401-547 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 16 | B | e5n61B5 | B:1041-1203 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 17 | B | e5n61B6 | B:799-911 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 18 | B | e5n61B7 | B:210-400 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 19 | C | e5n61C1 | C:31-75,C:222-335 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 20 | C | e5n61C2 | C:76-221 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 21 | D | e5n61D1 | D:12-48,D:80-96 | RNA_polI_A14 | 102 → 102.1 → 102.1.1 |
| 22 | E | e5n61E1 | E:144-215 | RNA_pol_Rpb5_C | 840 → 840.1 → 840.1.1 |
| 23 | E | e5n61E2 | E:4-143 | RNA_pol_Rpb5_N | 2008 → 2008.3 → 2008.3.1 |
| 24 | F | e5n61F1 | F:55-154 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.1 |
| 25 | G | e5n61G1 | G:14-126 | SHS2_Rpb7-N | 872 → 872.1 → 872.1.1 |
| 26 | G | e5n61G2 | G:126-170,G:215-250 | RPA43_OB | 2 → 2.1 → 2.1.1 |
| 27 | H | e5n61H1 | H:3-146 | RNA_pol_Rpb8 | 2 → 2.1 → 2.1.1 |
| 28 | I | e5n61I1 | I:2-64 | RNA_POL_M_15KD | 375 → 375.1 → 375.1.1 |
| 29 | J | e5n61J1 | J:1-69 | RNA_pol_N | 101 → 101.4 → 101.4.1 |
| 30 | K | e5n61K1 | K:42-142 | RNA_pol_L_2 | 305 → 305.1 → 305.1.1 |
| 31 | L | e5n61L1 | L:27-70 | DNA_RNApol_7kD | 375 → 375.1 → 375.1.1 |
| 32 | M | e5n61M1 | M:8-115 | RNA_pol_I_A49 | 59 → 59.1 → 59.1.3 |
| 33 | N | e5n61N1 | N:24-180 | RNA_polI_A34 | 59 → 59.1 → 59.1.3 |
| 34 | O | e5n61O1 | O:48-248,O:324-551,O:581-614 | RRN3 | 109 → 109.4 → 109.4.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors