PDB 5ND9
ELECTRON MICROSCOPY0 chains54 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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1 domainAll Domains (54)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | 0 | e5nd901 | 0:10-55 | Ribosomal_L28 | 4232 → 4232.1 → 4232.1.1 |
| 2 | 1 | e5nd911 | 1:2-66 | Ribosomal_L29 | 192 → 192.4 → 192.4.1 |
| 3 | 2 | e5nd921 | 2:2-58 | Ribosomal_L30 | 887 → 887.1 → 887.1.1 |
| 4 | 3 | e5nd931 | 3:1-81 | Ribosomal_L31 | 4987 → 4987.1 → 4987.1.1 |
| 5 | 4 | e5nd941 | 4:2-45 | Ribosomal_L32p | 375 → 375.1 → 375.1.1 |
| 6 | 5 | e5nd951 | 5:8-46 | Ribosomal_L33 | 375 → 375.1 → 375.1.1 |
| 7 | 6 | e5nd961 | 6:2-45 | Ribosomal_L34 | 3074 → 3074.1 → 3074.1.1 |
| 8 | 7 | e5nd971 | 7:2-61 | Ribosomal_L35p | 4281 → 4281.1 → 4281.1.1 |
| 9 | 8 | e5nd981 | 8:1-37 | Ribosomal_L36 | 919 → 919.1 → 919.1.1 |
| 10 | b | e5nd9b1 | b:7-228 | Ribosomal_S2 | 2007 → 2007.6 → 2007.6.1 |
| 11 | c | e5nd9c1 | c:2-104 | KH_2 | 327 → 327.11 → 327.11.1 |
| 12 | c | e5nd9c2 | c:105-204 | Ribosomal_S3_C | 230 → 230.2 → 230.2.1 |
| 13 | d | e5nd9d1 | d:2-200 | Ribosomal_S4,S4 | 221 → 221.1 → 221.1.2 |
| 14 | D | e5nd9D1 | D:1-124 | Ribosomal_L2 | 2 → 2.1 → 2.1.1 |
| 15 | D | e5nd9D2 | D:125-275 | Ribosomal_L2_C | 4 → 4.1 → 4.1.1 |
| 16 | e | e5nd9e1 | e:7-76 | Ribosomal_S5 | 330 → 330.1 → 330.1.1 |
| 17 | e | e5nd9e2 | e:77-166 | Ribosomal_S5_C | 212 → 212.1 → 212.1.1 |
| 18 | E | e5nd9E1 | E:2-219 | Ribosomal_L3 | 1 → 1.1 → 1.1.7 |
| 19 | f | e5nd9f1 | f:1-94 | Ribosomal_S6 | 304 → 304.12 → 304.12.1 |
| 20 | F | e5nd9F1 | F:3-201 | Ribosomal_L4 | 7559 → 7559.1 → 7559.1.1 |
| 21 | g | e5nd9g1 | g:7-153 | Ribosomal_S7 | 167 → 167.1 → 167.1.1 |
| 22 | G | e5nd9G1 | G:5-170 | Ribosomal_L5,Ribosomal_L5_C | 882 → 882.1 → 882.1.1 |
| 23 | h | e5nd9h1 | h:2-67 | Ribosomal_S8 | 320 → 320.2 → 320.2.1 |
| 24 | h | e5nd9h2 | h:68-132 | Ribosomal_S8 | 4988 → 4988.1 → 4988.1.1 |
| 25 | H | e5nd9H1 | H:8-82 | Ribosomal_L6 | 318 → 318.1 → 318.1.1 |
| 26 | H | e5nd9H2 | H:83-171 | Ribosomal_L6 | 318 → 318.1 → 318.1.1 |
| 27 | i | e5nd9i1 | i:5-132 | Ribosomal_S9 | 212 → 212.1 → 212.1.1 |
| 28 | j | e5nd9j1 | j:4-102 | Ribosomal_S10 | 304 → 304.44 → 304.44.1 |
| 29 | k | e5nd9k1 | k:13-127 | Ribosomal_S11 | 2484 → 2484.1 → 2484.1.1 |
| 30 | l | e5nd9l1 | l:2-136 | Ribosom_S12_S23 | 2 → 2.1 → 2.1.1 |
| 31 | m | e5nd9m1 | m:2-111 | Ribosomal_S13 | 102 → 102.2 → 102.2.1 |
| 32 | M | e5nd9M1 | M:1-145 | Ribosomal_L13 | 2490 → 2490.2 → 2490.2.1 |
| 33 | n | e5nd9n1 | n:2-61 | Ribosomal_S14 | 377 → 377.1 → 377.1.1 |
| 34 | N | e5nd9N1 | N:1-122 | Ribosomal_L14 | 3174 → 3174.1 → 3174.1.1 |
| 35 | o | e5nd9o1 | o:2-89 | Ribosomal_S15 | 616 → 616.1 → 616.1.1 |
| 36 | O | e5nd9O1 | O:1-131 | Ribosomal_L27A, PF29471 | 2490 → 2490.3 → 2490.3.1 |
| 37 | p | e5nd9p1 | p:2-91 | Ribosomal_S16 | 837 → 837.1 → 837.1.1 |
| 38 | P | e5nd9P1 | P:4-136 | Ribosomal_L16 | 325 → 325.1 → 325.1.5 |
| 39 | q | e5nd9q1 | q:2-86 | Ribosomal_S17 | 2 → 2.1 → 2.1.1 |
| 40 | Q | e5nd9Q1 | Q:4-120 | Ribosomal_L17 | 218 → 218.3 → 218.3.1 |
| 41 | r | e5nd9r1 | r:24-79 | Ribosomal_S18 | 101 → 101.1 → 101.1.1 |
| 42 | R | e5nd9R1 | R:1-119 | Ribosomal_L18p | 2484 → 2484.1 → 2484.1.1 |
| 43 | s | e5nd9s1 | s:4-87 | Ribosomal_S19 | 838 → 838.1 → 838.1.1 |
| 44 | S | e5nd9S1 | S:4-110 | Ribosomal_L19 | 4 → 4.1 → 4.1.1 |
| 45 | t | e5nd9t1 | t:3-82 | Ribosomal_S20p | 604 → 604.9 → 604.9.1 |
| 46 | T | e5nd9T1 | T:2-117 | Ribosomal_L20 | 143 → 143.2 → 143.2.1 |
| 47 | u | e5nd9u1 | u:10-54 | Ribosomal_S21 | 3666 → 3666.1 → 3666.1.1 |
| 48 | U | e5nd9U1 | U:1-102 | Ribosomal_L21p | 4186 → 4186.1 → 4186.1.1 |
| 49 | v | e5nd9v1 | v:4-104 | Ribosomal_S30AE | 330 → 330.2 → 330.2.1 |
| 50 | V | e5nd9V1 | V:1-112 | Ribosomal_L22 | 218 → 218.2 → 218.2.1 |
| 51 | W | e5nd9W1 | W:2-90 | Ribosomal_L23 | 304 → 304.109 → 304.109.1 |
| 52 | X | e5nd9X1 | X:3-102 | KOW,ribosomal_L24 | 4 → 4.1 → 4.1.1 |
| 53 | Y | e5nd9Y1 | Y:3-96 | Ribosomal_L25p | 239 → 239.1 → 239.1.1 |
| 54 | Z | e5nd9Z1 | Z:17-93 | 325.1.8.0 | 325 → 325.1 → 325.1.8 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors