PDB 5NRL
ELECTRON MICROSCOPY0 chains78 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
Loading viewer...
Domains by Chain
Chain 3view chain
1 domainChain 7view chain
1 domainChain 8view chain
1 domainChain aview chain
1 domainChain Aview chain
6 domainsChain bview chain
1 domainChain Bview chain
12 domainsChain Cview chain
5 domainsChain dview chain
1 domainChain Dview chain
1 domainChain eview chain
1 domainChain fview chain
1 domainChain Fview chain
3 domainsChain gview chain
1 domainChain Gview chain
2 domainsChain hview chain
1 domainChain Hview chain
1 domainChain iview chain
1 domainChain jview chain
1 domainChain Jview chain
1 domainChain kview chain
1 domainChain Kview chain
1 domainChain lview chain
1 domainChain mview chain
1 domainChain Mview chain
1 domainChain nview chain
1 domainChain oview chain
1 domainChain Oview chain
1 domainChain pview chain
1 domainChain Pview chain
4 domainsChain qview chain
1 domainChain rview chain
1 domainChain Rview chain
2 domainsChain sview chain
1 domainChain Sview chain
3 domainsChain tview chain
1 domainChain Tview chain
1 domainChain uview chain
1 domainChain Uview chain
2 domainsChain vview chain
1 domainChain Vview chain
1 domainChain wview chain
1 domainChain Wview chain
1 domainChain xview chain
1 domainChain yview chain
1 domainChain Yview chain
1 domainChain zview chain
1 domainChain Zview chain
1 domainAll Domains (78)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | 3 | e5nrl31 | 3:3-79 | LSM | 4 → 4.1 → 4.1.1 |
| 2 | 7 | e5nrl71 | 7:26-105 | LSM | 4 → 4.1 → 4.1.1 |
| 3 | 8 | e5nrl81 | 8:4-67 | LSM | 4 → 4.1 → 4.1.1 |
| 4 | a | e5nrla1 | a:1-90 | LSM | 4 → 4.1 → 4.1.1 |
| 5 | A | e5nrlA1 | A:884-1255 | RRM_4 | 304 → 304.48 → 304.48.1 |
| 6 | A | e5nrlA2 | A:1575-1826 | U6-snRNA_bdg | 2008 → 2008.1 → 2008.1.1 |
| 7 | A | e5nrlA3 | A:1256-1574 | U6-snRNA_bdg,U5_2-snRNA_bdg | 4967 → 4967.1 → 4967.1.1 |
| 8 | A | e5nrlA4 | A:2088-2401 | PROCT | 2492 → 2492.1 → 2492.1.1 |
| 9 | A | e5nrlA5 | A:1827-2087 | PRP8_domainIV | 2484 → 2484.1 → 2484.1.1 |
| 10 | A | e5nrlA6 | A:128-883 | PRO8NT,PROCN | 1038 → 1038.1 → 1038.1.1 |
| 11 | b | e5nrlb1 | b:12-54,b:76-102 | LSM | 4 → 4.1 → 4.1.1 |
| 12 | B | e5nrlB1 | B:1199-1333 | Sec63 | 11 → 11.1 → 11.1.1 |
| 13 | B | e5nrlB2 | B:1334-1541 | DEAD | 2004 → 2004.1 → 2004.1.1 |
| 14 | B | e5nrlB3 | B:906-1010 | SNRNP200_wHTH | 101 → 101.1 → 101.1.2 |
| 15 | B | e5nrlB4 | B:1143-1198 | 102.5.1.0 | 102 → 102.5 → 102.5.1 |
| 16 | B | e5nrlB5 | B:1011-1142 | Sec63 | 4156 → 4156.1 → 4156.1.1 |
| 17 | B | e5nrlB6 | B:2050-2163 | Sec63 | 11 → 11.1 → 11.1.1 |
| 18 | B | e5nrlB7 | B:701-905 | Helicase_C | 2004 → 2004.1 → 2004.1.1 |
| 19 | B | e5nrlB8 | B:447-700 | DEAD | 2004 → 2004.1 → 2004.1.1 |
| 20 | B | e5nrlB9 | B:1859-1991 | Sec63 | 4156 → 4156.1 → 4156.1.1 |
| 21 | B | e5nrlB10 | B:1992-2049 | 102.5.1.0 | 102 → 102.5 → 102.5.1 |
| 22 | B | e5nrlB11 | B:1741-1858 | SNRNP200_wHTH | 101 → 101.1 → 101.1.2 |
| 23 | B | e5nrlB12 | B:1542-1740 | 2004.1.1.0 | 2004 → 2004.1 → 2004.1.1 |
| 24 | C | e5nrlC1 | C:706-855 | EFG_IV | 212 → 212.1 → 212.1.1 |
| 25 | C | e5nrlC2 | C:443-508,C:529-593 | 1.1.7.0 | 1 → 1.1 → 1.1.7 |
| 26 | C | e5nrlC3 | C:594-693 | 304.24.1.0 | 304 → 304.24 → 304.24.1 |
| 27 | C | e5nrlC4 | C:105-442 | GTP_EFTU | 2004 → 2004.1 → 2004.1.1 |
| 28 | C | e5nrlC5 | C:856-976 | EFG_C | 304 → 304.24 → 304.24.1 |
| 29 | d | e5nrld1 | d:4-86 | LSM | 4 → 4.1 → 4.1.1 |
| 30 | D | e5nrlD1 | D:2-143 | DIM1 | 2485 → 2485.1 → 2485.1.1 |
| 31 | e | e5nrle1 | e:10-93 | LSM | 4 → 4.1 → 4.1.1 |
| 32 | f | e5nrlf1 | f:13-84 | LSM | 4 → 4.1 → 4.1.1 |
| 33 | F | e5nrlF1 | F:225-348 | Nop | 102 → 102.1 → 102.1.4 |
| 34 | F | e5nrlF2 | F:349-458 | Prp31_C | 1039 → 1039.1 → 1039.1.1 |
| 35 | F | e5nrlF3 | F:42-224 | Nop | 606 → 606.1 → 606.1.1 |
| 36 | g | e5nrlg1 | g:3-73 | LSM | 4 → 4.1 → 4.1.1 |
| 37 | G | e5nrlG1 | G:332-466 | Prp3_C | 304 → 304.110 → 304.110.1 |
| 38 | G | e5nrlG2 | G:140-174,G:217-331 | PRP3 | 1040 → 1040.1 → 1040.1.1 |
| 39 | h | e5nrlh1 | h:1-48,h:78-109 | LSM | 4 → 4.1 → 4.1.1 |
| 40 | H | e5nrlH1 | H:109-465 | WD40 | 5 → 5.1 → 5.1.4 |
| 41 | i | e5nrli1 | i:17-108 | LSM | 4 → 4.1 → 4.1.1 |
| 42 | j | e5nrlj1 | j:1-90 | LSM | 4 → 4.1 → 4.1.1 |
| 43 | J | e5nrlJ1 | J:155-178,J:211-899 | PF29376 | 109 → 109.4 → 109.4.1 |
| 44 | k | e5nrlk1 | k:12-54,k:76-102 | LSM | 4 → 4.1 → 4.1.1 |
| 45 | K | e5nrlK1 | K:3-126 | Ribosomal_L7Ae | 301 → 301.1 → 301.1.1 |
| 46 | l | e5nrll1 | l:1-48,l:78-119,l:138-146 | LSM | 4 → 4.1 → 4.1.1 |
| 47 | m | e5nrlm1 | m:17-108 | LSM | 4 → 4.1 → 4.1.1 |
| 48 | M | e5nrlM1 | M:2-209 | PRP38 | 109 → 109.50 → 109.50.1 |
| 49 | n | e5nrln1 | n:4-85 | LSM | 4 → 4.1 → 4.1.1 |
| 50 | o | e5nrlo1 | o:4-84 | LSM | 4 → 4.1 → 4.1.1 |
| 51 | O | e5nrlO1 | O:132-149,O:155-971 | PPP2R1A-like_HEAT | 109 → 109.4 → 109.4.1 |
| 52 | p | e5nrlp1 | p:10-93 | LSM | 4 → 4.1 → 4.1.1 |
| 53 | P | e5nrlP1 | P:1232-1261,P:1298-1361 | CPSF_A | 101 → 101.1 → 101.1.1 |
| 54 | P | e5nrlP2 | P:452-784,P:815-851 | Beta-prop_RSE1_2nd | 5 → 5.1 → 5.1.4 |
| 55 | P | e5nrlP3 | P:852-890,P:918-1231 | CPSF_A | 5 → 5.1 → 5.1.4 |
| 56 | P | e5nrlP4 | P:53-299,P:324-451,P:472-483 | MMS1_N | 5 → 5.1 → 5.1.4 |
| 57 | q | e5nrlq1 | q:12-84 | LSM | 4 → 4.1 → 4.1.1 |
| 58 | r | e5nrlr1 | r:2-76 | LSM | 4 → 4.1 → 4.1.1 |
| 59 | R | e5nrlR1 | R:106-203 | RRM_1 | 304 → 304.9 → 304.9.1 |
| 60 | R | e5nrlR2 | R:9-86 | RRM_1 | 304 → 304.9 → 304.9.1 |
| 61 | s | e5nrls1 | s:12-54,s:76-102 | LSM | 4 → 4.1 → 4.1.1 |
| 62 | S | e5nrlS1 | S:28-43,S:71-83 | 377.1.1.0 | 377 → 377.1 → 377.1.1 |
| 63 | S | e5nrlS2 | S:2-18,S:42-54,S:82-104 | PHF5 | 377 → 377.1 → 377.1.1 |
| 64 | S | e5nrlS3 | S:21-27,S:55-70 | 377.1.1.0 | 377 → 377.1 → 377.1.1 |
| 65 | t | e5nrlt1 | t:1-48,t:78-101 | LSM | 4 → 4.1 → 4.1.1 |
| 66 | T | e5nrlT01 | T:1-378 | 3403.1.1.0 | 3403 → 3403.1 → 3403.1.1 |
| 67 | u | e5nrlu1 | u:17-108 | LSM | 4 → 4.1 → 4.1.1 |
| 68 | U | e5nrlU1 | U:125-253 | SF3A2 | 319 → 319.2 → 319.2.1 |
| 69 | U | e5nrlU2 | U:34-95 | zf-met | 386 → 386.1 → 386.1.1 |
| 70 | v | e5nrlv1 | v:4-85 | LSM | 4 → 4.1 → 4.1.1 |
| 71 | V | e5nrlV1 | V:89-228 | Surp | 574 → 574.1 → 574.1.1 |
| 72 | w | e5nrlw1 | w:10-93 | LSM | 4 → 4.1 → 4.1.1 |
| 73 | W | e5nrlW1 | W:1-170 | LRR_9 | 207 → 207.1 → 207.1.1 |
| 74 | x | e5nrlx1 | x:12-84 | LSM | 4 → 4.1 → 4.1.1 |
| 75 | y | e5nrly1 | y:2-76 | LSM | 4 → 4.1 → 4.1.1 |
| 76 | Y | e5nrlY1 | Y:28-111 | RRM_5 | 304 → 304.9 → 304.9.1 |
| 77 | z | e5nrlz1 | z:11-84 | LSM | 4 → 4.1 → 4.1.1 |
| 78 | Z | e5nrlZ1 | Z:2-84 | SF3b10 | 1106 → 1106.1 → 1106.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors