PDB 5NSS
ELECTRON MICROSCOPY0 chains40 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Aview chain
2 domainsChain Bview chain
2 domainsChain Cview chain
10 domainsChain Dview chain
9 domainsChain Eview chain
1 domainChain Fview chain
2 domainsChain Gview chain
2 domainsChain Jview chain
2 domainsChain Kview chain
2 domainsChain Lview chain
2 domainsChain Mview chain
4 domainsChain Nview chain
2 domainsAll Domains (40)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e5nssA1 | A:53-173 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 2 | A | e5nssA2 | A:2-52,A:174-239 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 3 | B | e5nssB1 | B:4-52,B:174-238 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 4 | B | e5nssB2 | B:53-173 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 5 | C | e5nssC1 | C:152-225,C:343-451 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 6 | C | e5nssC2 | C:578-712 | RNA_pol_Rpb2_45 | 4042 → 4042.1 → 4042.1.1 |
| 7 | C | e5nssC3 | C:791-827,C:1063-1239 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 8 | C | e5nssC4 | C:939-1044 | 3681.1.1.0 | 3681 → 3681.1 → 3681.1.1 |
| 9 | C | e5nssC5 | C:1-151,C:452-577 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 10 | C | e5nssC6 | C:226-234,C:289-342 | 275.1.1.0 | 275 → 275.1 → 275.1.1 |
| 11 | C | e5nssC7 | C:713-790 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 12 | C | e5nssC8 | C:828-938,C:1045-1062 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 13 | C | e5nssC9 | C:235-288 | 275.1.1.0 | 275 → 275.1 → 275.1.1 |
| 14 | C | e5nssC10 | C:1240-1340 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 15 | D | e5nssD1 | D:932-1022 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 16 | D | e5nssD2 | D:334-498 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 17 | D | e5nssD3 | D:499-638 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 18 | D | e5nssD4 | D:15-54,D:56-341 | 4246.1.1.0 | 4246 → 4246.1 → 4246.1.1 |
| 19 | D | e5nssD5 | D:639-810 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 20 | D | e5nssD6 | D:1023-1151 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 21 | D | e5nssD7 | D:895-931,D:1214-1376 | RNA_pol_Rpb1_5 | 4954 → 4954.1 → 4954.1.1 |
| 22 | D | e5nssD8 | D:1152-1215 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 23 | D | e5nssD9 | D:811-894 | 275.1.1.0 | 275 → 275.1 → 275.1.1 |
| 24 | E | e5nssE1 | E:2-75 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.2 |
| 25 | F | e5nssF1 | F:178-255 | AAA_lid_14 | 148 → 148.1 → 148.1.3 |
| 26 | F | e5nssF2 | F:8-177 | Sigma54_activat | 2004 → 2004.1 → 2004.1.1 |
| 27 | G | e5nssG1 | G:178-258 | AAA_lid_14 | 148 → 148.1 → 148.1.3 |
| 28 | G | e5nssG2 | G:8-177 | Sigma54_activat | 2004 → 2004.1 → 2004.1.1 |
| 29 | J | e5nssJ1 | J:178-258 | AAA_lid_14 | 148 → 148.1 → 148.1.3 |
| 30 | J | e5nssJ2 | J:8-177 | Sigma54_activat | 2004 → 2004.1 → 2004.1.1 |
| 31 | K | e5nssK1 | K:178-255 | AAA_lid_14 | 148 → 148.1 → 148.1.3 |
| 32 | K | e5nssK2 | K:8-177 | Sigma54_activat | 2004 → 2004.1 → 2004.1.1 |
| 33 | L | e5nssL1 | L:8-177 | Sigma54_activat | 2004 → 2004.1 → 2004.1.1 |
| 34 | L | e5nssL2 | L:178-257 | AAA_lid_14 | 148 → 148.1 → 148.1.3 |
| 35 | M | e5nssM01 | M:-111--56 | Sigma54_AID | 1004 → 1004.1 → 1004.1.1 |
| 36 | M | e5nssM02 | M:-8-257D | Sigma54_CBD | 101 → 101.1 → 101.1.20 |
| 37 | M | e5nssM03 | M:257E-396I | 101.1.1.33 | 101 → 101.1 → 101.1.1 |
| 38 | M | e5nssM04 | M:415-474 | Sigma54_DBD | 101 → 101.1 → 101.1.1 |
| 39 | N | e5nssN1 | N:178-258 | AAA_lid_14 | 148 → 148.1 → 148.1.3 |
| 40 | N | e5nssN2 | N:8-177 | Sigma54_activat | 2004 → 2004.1 → 2004.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors