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PDB 5NSS

ELECTRON MICROSCOPY0 chains40 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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All Domains (40)

#ChainDomain IDRangeFamilyClassification
1Ae5nssA1A:53-173RNA_pol_A_bac240 → 240.2 → 240.2.1
2Ae5nssA2A:2-52,A:174-239RNA_pol_L305 → 305.1 → 305.1.1
3Be5nssB1B:4-52,B:174-238RNA_pol_L305 → 305.1 → 305.1.1
4Be5nssB2B:53-173RNA_pol_A_bac240 → 240.2 → 240.2.1
5Ce5nssC1C:152-225,C:343-451RNA_pol_Rpb2_24041 → 4041.1 → 4041.1.1
6Ce5nssC2C:578-712RNA_pol_Rpb2_454042 → 4042.1 → 4042.1.1
7Ce5nssC3C:791-827,C:1063-1239RNA_pol_Rpb2_61 → 1.1 → 1.1.2
8Ce5nssC4C:939-10443681.1.1.03681 → 3681.1 → 3681.1.1
9Ce5nssC5C:1-151,C:452-577RNA_pol_Rpb2_1,RNA_pol_Rpb2_34010 → 4010.1 → 4010.1.1
10Ce5nssC6C:226-234,C:289-342275.1.1.0275 → 275.1 → 275.1.1
11Ce5nssC7C:713-790RNA_pol_Rpb2_6325 → 325.1 → 325.1.7
12Ce5nssC8C:828-938,C:1045-1062RNA_pol_Rpb2_6325 → 325.1 → 325.1.7
13Ce5nssC9C:235-288275.1.1.0275 → 275.1 → 275.1.1
14Ce5nssC10C:1240-1340RNA_pol_Rpb2_6,RNA_pol_Rpb2_74043 → 4043.1 → 4043.1.1
15De5nssD1D:932-1022325.1.7.0325 → 325.1 → 325.1.7
16De5nssD2D:334-498RNA_pol_Rpb1_21 → 1.1 → 1.1.2
17De5nssD3D:499-638RNA_pol_Rpb1_34959 → 4959.1 → 4959.1.1
18De5nssD4D:15-54,D:56-3414246.1.1.04246 → 4246.1 → 4246.1.1
19De5nssD5D:639-810RNA_pol_Rpb1_5,RNA_pol_Rpb1_44958 → 4958.1 → 4958.1.1
20De5nssD6D:1023-1151325.1.7.0325 → 325.1 → 325.1.7
21De5nssD7D:895-931,D:1214-1376RNA_pol_Rpb1_54954 → 4954.1 → 4954.1.1
22De5nssD8D:1152-1215325.1.7.0325 → 325.1 → 325.1.7
23De5nssD9D:811-894275.1.1.0275 → 275.1 → 275.1.1
24Ee5nssE1E:2-75RNA_pol_Rpb6152 → 152.1 → 152.1.2
25Fe5nssF1F:178-255AAA_lid_14148 → 148.1 → 148.1.3
26Fe5nssF2F:8-177Sigma54_activat2004 → 2004.1 → 2004.1.1
27Ge5nssG1G:178-258AAA_lid_14148 → 148.1 → 148.1.3
28Ge5nssG2G:8-177Sigma54_activat2004 → 2004.1 → 2004.1.1
29Je5nssJ1J:178-258AAA_lid_14148 → 148.1 → 148.1.3
30Je5nssJ2J:8-177Sigma54_activat2004 → 2004.1 → 2004.1.1
31Ke5nssK1K:178-255AAA_lid_14148 → 148.1 → 148.1.3
32Ke5nssK2K:8-177Sigma54_activat2004 → 2004.1 → 2004.1.1
33Le5nssL1L:8-177Sigma54_activat2004 → 2004.1 → 2004.1.1
34Le5nssL2L:178-257AAA_lid_14148 → 148.1 → 148.1.3
35Me5nssM01M:-111--56Sigma54_AID1004 → 1004.1 → 1004.1.1
36Me5nssM02M:-8-257DSigma54_CBD101 → 101.1 → 101.1.20
37Me5nssM03M:257E-396I101.1.1.33101 → 101.1 → 101.1.1
38Me5nssM04M:415-474Sigma54_DBD101 → 101.1 → 101.1.1
39Ne5nssN1N:178-258AAA_lid_14148 → 148.1 → 148.1.3
40Ne5nssN2N:8-177Sigma54_activat2004 → 2004.1 → 2004.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors