ECODEvolutionary Classification of Protein Domains

Home/PDB

PDB 5OMW

X-RAY DIFFRACTION2.60 Å0 chains14 ECOD domains

View in RCSB PDB

3D Structure(domains colored, ligands/nucleic acids shown)

Loading viewer...

Domains by Chain

Chain Aview chain

7 domains

e5omwA1(A:226-415)e5omwA2(A:570-618)e5omwA3(A:416-489)e5omwA5(A:797-860)e5omwA7(A:148-225)e5omwA6(A:619-796)e5omwA8(A:1-157,A:492-568)

Chain Dview chain

7 domains

e5omwD2(D:570-618)e5omwD4(D:148-225)e5omwD5(D:416-489)e5omwD6(D:226-415)e5omwD7(D:797-860)e5omwD8(D:619-796)e5omwD9(D:1-157,D:492-568)

All Domains (14)

#	Chain	Domain ID	Range	Family	Classification
1	A	e5omwA1	A:226-415	tRNA-synt_1_2	1 → 1.1 → 1.1.1
2	A	e5omwA2	A:570-618	375.14.1.0	375 → 375.14 → 375.14.1
3	A	e5omwA3	A:416-489	tRNA-synt_1	375 → 375.1 → 375.1.1
4	A	e5omwA5	A:797-860	221.15.1.0	221 → 221.15 → 221.15.1
5	A	e5omwA7	A:148-225	tRNA-synt_1	375 → 375.1 → 375.1.1
6	A	e5omwA6	A:619-796	140.1.1.0	140 → 140.1 → 140.1.1
7	A	e5omwA8	A:1-157,A:492-568	tRNA-synt_1	2005 → 2005.1 → 2005.1.1
8	D	e5omwD2	D:570-618	375.14.1.0	375 → 375.14 → 375.14.1
9	D	e5omwD4	D:148-225	tRNA-synt_1	375 → 375.1 → 375.1.1
10	D	e5omwD5	D:416-489	tRNA-synt_1	375 → 375.1 → 375.1.1
11	D	e5omwD6	D:226-415	tRNA-synt_1_2	1 → 1.1 → 1.1.1
12	D	e5omwD7	D:797-860	221.15.1.0	221 → 221.15 → 221.15.1
13	D	e5omwD8	D:619-796	140.1.1.0	140 → 140.1 → 140.1.1
14	D	e5omwD9	D:1-157,D:492-568	tRNA-synt_1	2005 → 2005.1 → 2005.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors