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PDB 5OOM

ELECTRON MICROSCOPY0 chains55 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

All Domains (55)

#ChainDomain IDRangeFamilyClassification
10e5oom010:79-186Ribosomal_L32p375 → 375.1 → 375.1.1
21e5oom111:14-65Ribosomal_L33375 → 375.1 → 375.1.1
32e5oom212:50-92Ribosomal_L343074 → 3074.1 → 3074.1.1
43e5oom313:94-188Ribosomal_L35p4281 → 4281.1 → 4281.1.1
55e5oom515:31-422PDCD92008 → 2008.1 → 2008.1.1
66e5oom616:27-79,6:99-380PBP11 → 11.1 → 11.1.7
77e5oom717:69-138TGS221 → 221.1 → 221.1.1
87e5oom727:36-68,7:139-322309.1.2.0309 → 309.1 → 309.1.2
98e5oom818:83-181MRP-L283864 → 3864.1 → 3864.1.1
109e5oom919:15-137MRP-L273865 → 3865.1 → 3865.1.1
11ae5ooma1a:35-77,a:104-142MRP-S323905 → 3905.1 → 3905.1.1
12be5oomb1b:2-149L51_S25_CI-B82485 → 2485.1 → 2485.1.1
13ce5oomc1c:31-233RM44_endonuclase171 → 171.1 → 171.1.1
14ce5oomc2c:234-316DSRM_MRPL44330 → 330.1 → 330.1.1
15de5oomd1d:50-91,d:117-294Tim44243 → 243.1 → 243.1.1
16De5oomD1D:179-296Ribosomal_L2_C4 → 4.1 → 4.1.1
17De5oomD2D:61-178Ribosomal_L22 → 2.1 → 2.1.1
18ee5oome1e:43-279MRP-L46221 → 221.4 → 221.4.1
19Ee5oomE1E:45-225,E:245-348Ribosomal_L31 → 1.1 → 1.1.7
20fe5oomf1f:48-190Ribosomal_S10304 → 304.44 → 304.44.1
21Fe5oomF1F:45-273Ribosomal_L47559 → 7559.1 → 7559.1.1
22ge5oomg1g:38-166Img2306 → 306.3 → 306.3.1
23he5oomh1h:56-158Ribosomal_L50132 → 132.1 → 132.1.1
24He5oomH1H:53-147Ribosomal_L9_N+bL9m_N4076 → 4076.1 → 4076.1.1
25ie5oomi1i:32-128MRP-L51192 → 192.26 → 192.26.1
26Ie5oomI1I:30-197Ribosomal_L10304 → 304.60 → 304.60.1
27je5oomj1j:24-108MRPL523906 → 3906.1 → 3906.1.1
28Je5oomJ1J:18-83Ribosomal_L11_N3781 → 3781.1 → 3781.1.1
29Je5oomJ2J:83-157Ribosomal_L11101 → 101.1 → 101.1.16
30ke5oomk1k:13-96MRP_L532485 → 2485.1 → 2485.1.1
31Ke5oomK1K:2-178Ribosomal_L132490 → 2490.2 → 2490.2.1
32Le5oomL1L:31-145Ribosomal_L143174 → 3174.1 → 3174.1.1
33me5oomm1m:34-78Mitoc_L554987 → 4987.1 → 4987.1.1
34Me5oomM1M:10-296Ribosomal_L27A, PF294712490 → 2490.3 → 2490.3.1
35Ne5oomN1N:47-251Ribosomal_L16325 → 325.1 → 325.1.5
36oe5oomo1o:24-102MRP-633907 → 3907.1 → 3907.1.1
37Oe5oomO1O:9-136Ribosomal_L17218 → 218.3 → 218.3.1
38pe5oomp1p:38-193RF-1330 → 330.3 → 330.3.1
39Pe5oomP1P:39-179Ribosomal_L18p2484 → 2484.1 → 2484.1.1
40qe5oomq1q:25-152CR6_interact3866 → 3866.1 → 3866.1.1
41Qe5oomQ1Q:74-290Ribosomal_L194 → 4.1 → 4.1.1
42re5oomr1r:35-196Ribosomal_S18101 → 101.1 → 101.1.1
43Re5oomR1R:10-149Ribosomal_L20143 → 143.2 → 143.2.1
44se5ooms1s:41-119,s:140-430PDCD92008 → 2008.1 → 2008.1.1
45Se5oomS1S:49-204Ribosomal_L21p4186 → 4186.1 → 4186.1.1
46Te5oomT1T:47-212Ribosomal_L22218 → 218.2 → 218.2.1
47ue5oomu1u:91-201RsfS316 → 316.1 → 316.1.1
48Ue5oomU1U:2-153Ribosomal_L23304 → 304.109 → 304.109.1
49ve5oomv1v:2-70Complex1_LYR1128 → 1128.1 → 1128.1.1
50Ve5oomV1V:15-216KOW,ribosomal_L244 → 4.1 → 4.1.1
51we5oomw1w:74-152PP-binding132 → 132.1 → 132.1.1
52We5oomW1W:40-148325.1.8.0325 → 325.1 → 325.1.8
53Xe5oomX1X:2-244Ribosomal_L284232 → 4232.1 → 4232.1.1
54Ye5oomY1Y:63-238MRP-L47192 → 192.4 → 192.4.1
55Ze5oomZ1Z:35-154Ribosomal_L30887 → 887.1 → 887.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors