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PDB 5OQJ

ELECTRON MICROSCOPY0 chains57 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

All Domains (57)

#ChainDomain IDRangeFamilyClassification
10e5oqj010:503-723Helicase_C_22004 → 2004.1 → 2004.1.1
23e5oqj313:8-79zf-C3HC4_5376 → 376.1 → 376.1.1
33e5oqj323:80-145MAT1386 → 386.1 → 386.1.1
44e5oqj414:22-285Tfb42006 → 2006.1 → 2006.1.6
54e5oqj424:286-323375.1.1.0375 → 375.1 → 375.1.1
65e5oqj515:2-67Tfb54340 → 4340.1 → 4340.1.1
76e5oqj616:123-307Ssl12006 → 2006.1 → 2006.1.6
86e5oqj626:375-457C1_4376 → 376.1 → 376.1.2
96e5oqj636:308-374375.1.1.0375 → 375.1 → 375.1.1
107e5oqj717:546-722ERCC3_RAD25_C2004 → 2004.1 → 2004.1.1
117e5oqj727:363-545ResIII2004 → 2004.1 → 2004.1.1
127e5oqj737:723-770ERCC3_RAD25_C2004 → 2004.1 → 2004.1.1
13Ae5oqjA1A:1142-1272RNA_pol_Rpb1_74955 → 4955.1 → 4955.1.1
14Ae5oqjA2A:872-1059RNA_pol_Rpb1_64957 → 4957.1 → 4957.1.1
15Ae5oqjA3A:375-435RNA_pol_Rpb1_2275 → 275.1 → 275.1.1
16Ae5oqjA4A:1060-1112,A:1331-1452RNA_pol_Rpb1_54954 → 4954.1 → 4954.1.1
17Ae5oqjA5A:520-662RNA_pol_Rpb1_34959 → 4959.1 → 4959.1.1
18Ae5oqjA6A:663-871RNA_pol_Rpb1_5,RNA_pol_Rpb1_44958 → 4958.1 → 4958.1.1
19Ae5oqjA7A:337-374,A:436-519RNA_pol_Rpb1_21 → 1.1 → 1.1.2
20Ae5oqjA8A:3-3364246.1.1.04246 → 4246.1 → 4246.1.1
21Ae5oqjA9A:1113-1141,A:1273-1330RNA_pol_Rpb1_54956 → 4956.1 → 4956.1.1
22Be5oqjB1B:814-850,B:975-1097RNA_pol_Rpb2_61 → 1.1 → 1.1.2
23Be5oqjB2B:851-974RNA_pol_Rpb2_6325 → 325.1 → 325.1.7
24Be5oqjB3B:542-630RNA_pol_Rpb2_44961 → 4961.1 → 4961.1.1
25Be5oqjB4B:219-404RNA_pol_Rpb2_24041 → 4041.1 → 4041.1.1
26Be5oqjB5B:1098-1223RNA_pol_Rpb2_6,RNA_pol_Rpb2_74043 → 4043.1 → 4043.1.1
27Be5oqjB6B:631-8134042.1.1.04042 → 4042.1 → 4042.1.1
28Be5oqjB7B:20-218,B:405-541RNA_pol_Rpb2_1,RNA_pol_Rpb2_34010 → 4010.1 → 4010.1.1
29Ce5oqjC1C:4-41,C:173-265RNA_pol_L305 → 305.1 → 305.1.1
30Ce5oqjC2C:42-172RNA_pol_A_bac240 → 240.2 → 240.2.1
31De5oqjD1D:24-71,D:131-221RNA_pol_Rpb4102 → 102.1 → 102.1.1
32Ee5oqjE1E:3-143RNA_pol_Rpb5_N2008 → 2008.3 → 2008.3.1
33Ee5oqjE2E:144-215RNA_pol_Rpb5_C840 → 840.1 → 840.1.1
34Fe5oqjF1F:72-154RNA_pol_Rpb6152 → 152.1 → 152.1.1
35Ge5oqjG1G:1-68SHS2_Rpb7-N872 → 872.1 → 872.1.1
36Ge5oqjG2G:69-171S12 → 2.1 → 2.1.1
37He5oqjH1H:2-146RNA_pol_Rpb82 → 2.1 → 2.1.1
38Ie5oqjI1I:50-117TFIIS_C375 → 375.1 → 375.1.1
39Ie5oqjI2I:2-49RNA_POL_M_15KD375 → 375.1 → 375.1.1
40Je5oqjJ1J:1-65RNA_pol_N101 → 101.4 → 101.4.1
41Ke5oqjK1K:1-112RNA_pol_L_2305 → 305.1 → 305.1.1
42Le5oqjL1L:26-70DNA_RNApol_7kD375 → 375.1 → 375.1.1
43Me5oqjM1M:16-68TF_Zn_Ribbon375 → 375.1 → 375.1.1
44Me5oqjM2M:233-326TFIIB101 → 101.1 → 101.1.10
45Me5oqjM3M:67-218TFIIB101 → 101.1 → 101.1.10
46Oe5oqjO1O:61-156TBP331 → 331.1 → 331.1.1
47Oe5oqjO2O:157-240TBP331 → 331.1 → 331.1.1
48Qe5oqjQ1Q:21-35,Q:97-142,Q:327-415TFIIF_alpha59 → 59.1 → 59.1.1
49Re5oqjR1R:291-351TFIIF_beta101 → 101.1 → 101.1.2
50Re5oqjR2R:58-138,R:207-227TFIIF_beta_N59 → 59.1 → 59.1.1
51Ue5oqjU1U:241-286TFIIA74 → 74.1 → 74.1.1
52Ue5oqjU2U:2-47TFIIA104 → 104.1 → 104.1.1
53Ve5oqjV1V:5-54TFIIA_gamma_N104 → 104.1 → 104.1.1
54Ve5oqjV2V:55-119TFIIA_gamma_C74 → 74.1 → 74.1.1
55Xe5oqjX1X:123-188TFIIE_beta101 → 101.1 → 101.1.2
56Xe5oqjX2X:250-283TFA2_E-tether101 → 101.1 → 101.1.2
57Xe5oqjX3X:189-249TFA2_Winged_2101 → 101.1 → 101.1.2

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors