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PDB 5OQM

ELECTRON MICROSCOPY0 chains68 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

All Domains (68)

#ChainDomain IDRangeFamilyClassification
10e5oqm030:503-723Helicase_C_22004 → 2004.1 → 2004.1.1
23e5oqm313:8-79zf-C3HC4_5376 → 376.1 → 376.1.1
33e5oqm323:80-145MAT1386 → 386.1 → 386.1.1
44e5oqm414:22-285Tfb42006 → 2006.1 → 2006.1.6
54e5oqm424:286-323375.1.1.0375 → 375.1 → 375.1.1
65e5oqm515:2-67Tfb54340 → 4340.1 → 4340.1.1
76e5oqm616:375-457C1_4376 → 376.1 → 376.1.2
86e5oqm626:123-307Ssl12006 → 2006.1 → 2006.1.6
96e5oqm636:308-374375.1.1.0375 → 375.1 → 375.1.1
107e5oqm717:546-722ERCC3_RAD25_C2004 → 2004.1 → 2004.1.1
117e5oqm727:723-770ERCC3_RAD25_C2004 → 2004.1 → 2004.1.1
127e5oqm737:363-545ResIII2004 → 2004.1 → 2004.1.1
13ae5oqma1a:10-52,a:100-203,a:277-289Med63195 → 3195.1 → 3195.1.1
14Ae5oqmA1A:520-662RNA_pol_Rpb1_34959 → 4959.1 → 4959.1.1
15Ae5oqmA2A:375-435RNA_pol_Rpb1_2275 → 275.1 → 275.1.1
16Ae5oqmA3A:1142-1272RNA_pol_Rpb1_74955 → 4955.1 → 4955.1.1
17Ae5oqmA4A:872-1059RNA_pol_Rpb1_64957 → 4957.1 → 4957.1.1
18Ae5oqmA5A:3-3364246.1.1.04246 → 4246.1 → 4246.1.1
19Ae5oqmA6A:337-374,A:436-519RNA_pol_Rpb1_21 → 1.1 → 1.1.2
20Ae5oqmA7A:1113-1141,A:1273-1330RNA_pol_Rpb1_54956 → 4956.1 → 4956.1.1
21Ae5oqmA8A:663-871RNA_pol_Rpb1_5,RNA_pol_Rpb1_44958 → 4958.1 → 4958.1.1
22Ae5oqmA9A:1060-1112,A:1331-1452RNA_pol_Rpb1_54954 → 4954.1 → 4954.1.1
23be5oqmb1b:31-171,b:195-2103560.1.1.03560 → 3560.1 → 3560.1.1
24Be5oqmB1B:851-974RNA_pol_Rpb2_6325 → 325.1 → 325.1.7
25Be5oqmB2B:631-8134042.1.1.04042 → 4042.1 → 4042.1.1
26Be5oqmB3B:219-404RNA_pol_Rpb2_24041 → 4041.1 → 4041.1.1
27Be5oqmB4B:20-218,B:405-541RNA_pol_Rpb2_1,RNA_pol_Rpb2_34010 → 4010.1 → 4010.1.1
28Be5oqmB5B:1098-1223RNA_pol_Rpb2_6,RNA_pol_Rpb2_74043 → 4043.1 → 4043.1.1
29Be5oqmB6B:814-850,B:975-1097RNA_pol_Rpb2_61 → 1.1 → 1.1.2
30Be5oqmB7B:542-630RNA_pol_Rpb2_44961 → 4961.1 → 4961.1.1
31ce5oqmc1c:4-111Med113712 → 3712.1 → 3712.1.1
32Ce5oqmC1C:42-172RNA_pol_A_bac240 → 240.2 → 240.2.1
33Ce5oqmC2C:4-41,C:173-265RNA_pol_L305 → 305.1 → 305.1.1
34de5oqmd1d:199-6843561.1.1.03561 → 3561.1 → 3561.1.1
35De5oqmD1D:24-71,D:131-221RNA_pol_Rpb4102 → 102.1 → 102.1.1
36ee5oqme1e:2-93,e:159-301Med18868 → 868.1 → 868.1.1
37Ee5oqmE1E:144-215RNA_pol_Rpb5_C840 → 840.1 → 840.1.1
38Ee5oqmE2E:3-143RNA_pol_Rpb5_N2008 → 2008.3 → 2008.3.1
39fe5oqmf1f:2-209Med20868 → 868.1 → 868.1.1
40Fe5oqmF1F:72-154RNA_pol_Rpb6152 → 152.1 → 152.1.1
41ge5oqmg1g:2-1183559.1.1.03559 → 3559.1 → 3559.1.1
42Ge5oqmG1G:1-68SHS2_Rpb7-N872 → 872.1 → 872.1.1
43Ge5oqmG2G:69-171S12 → 2.1 → 2.1.1
44He5oqmH1H:2-146RNA_pol_Rpb82 → 2.1 → 2.1.1
45ie5oqmi1i:113-211Med74207 → 4207.1 → 4207.1.2
46ie5oqmi2i:16-733548.1.1.03548 → 3548.1 → 3548.1.1
47Ie5oqmI1I:50-117TFIIS_C375 → 375.1 → 375.1.1
48Ie5oqmI2I:2-49RNA_POL_M_15KD375 → 375.1 → 375.1.1
49Je5oqmJ1J:1-65RNA_pol_N101 → 101.4 → 101.4.1
50Ke5oqmK1K:1-112RNA_pol_L_2305 → 305.1 → 305.1.1
51Le5oqmL1L:26-70DNA_RNApol_7kD375 → 375.1 → 375.1.1
52Me5oqmM1M:16-68TF_Zn_Ribbon375 → 375.1 → 375.1.1
53Me5oqmM2M:67-218TFIIB101 → 101.1 → 101.1.10
54Me5oqmM3M:233-326TFIIB101 → 101.1 → 101.1.10
55ne5oqmn1n:3-138Med214207 → 4207.1 → 4207.1.1
56oe5oqmo1o:20-943548.1.1.03548 → 3548.1 → 3548.1.1
57Oe5oqmO1O:157-240TBP331 → 331.1 → 331.1.1
58Oe5oqmO2O:61-156TBP331 → 331.1 → 331.1.1
59Qe5oqmQ1Q:21-35,Q:97-142,Q:327-41559.1.1.059 → 59.1 → 59.1.1
60Re5oqmR1R:58-138,R:207-227TFIIF_beta_N59 → 59.1 → 59.1.1
61Re5oqmR2R:291-351TFIIF_beta101 → 101.1 → 101.1.2
62Ue5oqmU1U:241-286TFIIA74 → 74.1 → 74.1.1
63Ue5oqmU2U:2-47TFIIA104 → 104.1 → 104.1.1
64Ve5oqmV1V:55-119TFIIA_gamma_C74 → 74.1 → 74.1.1
65Ve5oqmV2V:5-54TFIIA_gamma_N104 → 104.1 → 104.1.1
66Xe5oqmX1X:123-188TFIIE_beta101 → 101.1 → 101.1.2
67Xe5oqmX2X:189-249TFA2_Winged_2101 → 101.1 → 101.1.2
68Xe5oqmX3X:250-283TFA2_E-tether101 → 101.1 → 101.1.2

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors