ECODEvolutionary Classification of Protein Domains

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PDB 5RMK

X-RAY DIFFRACTION2.08 Å0 chains12 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain Aview chain

6 domains

e5rmkA1(A:148-230)e5rmkA2(A:101-147)e5rmkA3(A:1-46)e5rmkA4(A:47-100)e5rmkA5(A:231-438)e5rmkA6(A:439-592)

Chain Bview chain

6 domains

e5rmkB1(B:231-438)e5rmkB2(B:47-100)e5rmkB3(B:2-46)e5rmkB4(B:101-147)e5rmkB5(B:148-230)e5rmkB6(B:439-593)

All Domains (12)

#	Chain	Domain ID	Range	Family	Classification
1	A	e5rmkA1	A:148-230	CoV_NSP13_1B	1 → 1.1 → 1.1.7
2	A	e5rmkA2	A:101-147	CoV_NSP13_stalk	1168 → 1168.1 → 1168.1.1
3	A	e5rmkA3	A:1-46	CoV_NSP13_ZBD	376 → 376.1 → 376.1.1
4	A	e5rmkA4	A:47-100	CoV_NSP13_ZBD	376 → 376.1 → 376.1.1
5	A	e5rmkA5	A:231-438	AAA_11	2004 → 2004.1 → 2004.1.1
6	A	e5rmkA6	A:439-592	AAA_12	2004 → 2004.1 → 2004.1.1
7	B	e5rmkB1	B:231-438	AAA_11	2004 → 2004.1 → 2004.1.1
8	B	e5rmkB2	B:47-100	CoV_NSP13_ZBD	376 → 376.1 → 376.1.1
9	B	e5rmkB3	B:2-46	CoV_NSP13_ZBD	376 → 376.1 → 376.1.1
10	B	e5rmkB4	B:101-147	CoV_NSP13_stalk	1168 → 1168.1 → 1168.1.1
11	B	e5rmkB5	B:148-230	CoV_NSP13_1B	1 → 1.1 → 1.1.7
12	B	e5rmkB6	B:439-593	AAA_12	2004 → 2004.1 → 2004.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors