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PDB 5SVA

ELECTRON MICROSCOPY0 chains64 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

All Domains (64)

#ChainDomain IDRangeFamilyClassification
1ae5svaa1a:447-508Tfb2_C4340 → 4340.1 → 4340.1.1
2Ae5svaA1A:1132-1242RNA_pol_Rpb1_74955 → 4955.1 → 4955.1.1
3Ae5svaA2A:3-336RNA_pol_Rpb1_14246 → 4246.1 → 4246.1.1
4Ae5svaA3A:375-435RNA_pol_Rpb1_2275 → 275.1 → 275.1.1
5Ae5svaA4A:520-662RNA_pol_Rpb1_34959 → 4959.1 → 4959.1.1
6Ae5svaA5A:1103-1131,A:1243-13004956.1.1.04956 → 4956.1 → 4956.1.1
7Ae5svaA6A:872-1059RNA_pol_Rpb1_64957 → 4957.1 → 4957.1.1
8Ae5svaA7A:1060-1102,A:1301-1455RNA_pol_Rpb1_54954 → 4954.1 → 4954.1.1
9Ae5svaA8A:663-871RNA_pol_Rpb1_5,RNA_pol_Rpb1_44958 → 4958.1 → 4958.1.1
10Ae5svaA9A:337-374,A:436-519RNA_pol_Rpb1_21 → 1.1 → 1.1.2
11be5svab1b:2-64Tfb54340 → 4340.1 → 4340.1.1
12Be5svaB1B:851-974RNA_pol_Rpb2_6325 → 325.1 → 325.1.7
13Be5svaB2B:631-8134042.1.1.04042 → 4042.1 → 4042.1.1
14Be5svaB3B:20-218,B:405-541RNA_pol_Rpb2_1,RNA_pol_Rpb2_34010 → 4010.1 → 4010.1.1
15Be5svaB4B:814-850,B:975-1097RNA_pol_Rpb2_61 → 1.1 → 1.1.2
16Be5svaB5B:219-404RNA_pol_Rpb2_24041 → 4041.1 → 4041.1.1
17Be5svaB6B:1098-1224RNA_pol_Rpb2_6,RNA_pol_Rpb2_74043 → 4043.1 → 4043.1.1
18Be5svaB7B:542-630RNA_pol_Rpb2_44961 → 4961.1 → 4961.1.1
19ce5svac1c:80-213TFIIB101 → 101.1 → 101.1.10
20ce5svac2c:22-79TF_Zn_Ribbon375 → 375.1 → 375.1.1
21Ce5svaC1C:38-172RNA_pol_A_bac240 → 240.2 → 240.2.1
22Ce5svaC2C:3-37,C:173-268RNA_pol_L305 → 305.1 → 305.1.1
23de5svad1d:228-286TFIIA74 → 74.1 → 74.1.1
24de5svad2d:2-61TFIIA104 → 104.1 → 104.1.1
25De5svaD1D:3-71,D:131-221RNA_pol_Rpb4102 → 102.1 → 102.1.1
26ee5svae1e:4-54TFIIA_gamma_N104 → 104.1 → 104.1.1
27ee5svae2e:55-120TFIIA_gamma_C74 → 74.1 → 74.1.1
28Ee5svaE1E:143-215RNA_pol_Rpb5_C840 → 840.1 → 840.1.1
29Ee5svaE2E:2-142RNA_pol_Rpb5_N2008 → 2008.3 → 2008.3.1
30fe5svaf1f:99-142,f:327-417TFIIF_alpha59 → 59.1 → 59.1.1
31Fe5svaF1F:72-155RNA_pol_Rpb6152 → 152.1 → 152.1.1
32ge5svag1g:54-139,g:210-227TFIIF_beta_N59 → 59.1 → 59.1.1
33ge5svag2g:291-359TFIIF_beta101 → 101.1 → 101.1.2
34Ge5svaG1G:69-171S12 → 2.1 → 2.1.1
35Ge5svaG2G:1-68SHS2_Rpb7-N872 → 872.1 → 872.1.1
36he5svah1h:119-160375.1.1.0375 → 375.1 → 375.1.1
37he5svah2h:12-95TFIIE_alpha101 → 101.1 → 101.1.2
38He5svaH1H:2-146RNA_pol_Rpb82 → 2.1 → 2.1.1
39ie5svai1i:188-250TFA2_Winged_2101 → 101.1 → 101.1.2
40ie5svai2i:125-187TFIIE_beta101 → 101.1 → 101.1.2
41Ie5svaI1I:50-120TFIIS_C375 → 375.1 → 375.1.1
42Ie5svaI2I:2-49RNA_POL_M_15KD375 → 375.1 → 375.1.1
43je5svaj1j:157-240TBP331 → 331.1 → 331.1.1
44je5svaj2j:61-156TBP331 → 331.1 → 331.1.1
45Je5svaJ1J:1-65RNA_pol_N101 → 101.4 → 101.4.1
46Ke5svaK1K:1-115RNA_pol_L_2305 → 305.1 → 305.1.1
47Le5svaL1L:25-70DNA_RNApol_7kD375 → 375.1 → 375.1.1
48Me5svaM1M:1-50,M:100-192Med63195 → 3195.1 → 3195.1.1
49ne5svan01n:1-137YEATS11 → 11.2 → 11.2.1
50ne5svan02n:170-243BET3525 → 3525.1 → 3525.1.1
51Ne5svaN1N:23-173,N:194-2103560.1.1.03560 → 3560.1 → 3560.1.1
52Oe5svaO1O:4-115Med113712 → 3712.1 → 3712.1.1
53Pe5svaP1P:182-6873561.1.1.03561 → 3561.1 → 3561.1.1
54Qe5svaQ1Q:2-107,Q:159-301Med18868 → 868.1 → 868.1.1
55Re5svaR1R:2-210Med20868 → 868.1 → 868.1.1
56Se5svaS1S:1-1213559.1.1.03559 → 3559.1 → 3559.1.1
57Ue5svaU1U:108-205Med74207 → 4207.1 → 4207.1.2
58Ue5svaU2U:11-833548.1.1.03548 → 3548.1 → 3548.1.1
59We5svaW1W:3-133Med214207 → 4207.1 → 4207.1.1
60Xe5svaX1X:16-1073548.1.1.03548 → 3548.1 → 3548.1.1
61Ye5svaY2Y:504-718Helicase_C_22004 → 2004.1 → 2004.1.1
62Ye5svaY3Y:18-244DEAD_22004 → 2004.1 → 2004.1.1
63Ze5svaZ1Z:294-538ResIII2004 → 2004.1 → 2004.1.1
64Ze5svaZ2Z:549-785Helicase_C, ERCC3_RAD25_C2004 → 2004.1 → 2004.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors