PDB 5TBZ
X-RAY DIFFRACTION7.00 Å0 chains51 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Aview chain
2 domainsChain Bview chain
2 domainsChain Cview chain
10 domainsChain Dview chain
10 domainsChain Fview chain
2 domainsChain Gview chain
2 domainsChain Hview chain
10 domainsChain Iview chain
9 domainsChain Jview chain
2 domainsChain Kview chain
2 domainsAll Domains (51)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e5tbzA1 | A:10-52,A:174-234 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 2 | A | e5tbzA2 | A:53-173 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 3 | B | e5tbzB1 | B:4-52,B:174-232 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 4 | B | e5tbzB2 | B:53-173 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 5 | C | e5tbzC1 | C:791-827,C:1063-1239 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 6 | C | e5tbzC2 | C:939-983,C:1004-1044 | 3681.1.1.0 | 3681 → 3681.1 → 3681.1.1 |
| 7 | C | e5tbzC3 | C:3-151,C:452-577 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 8 | C | e5tbzC4 | C:713-790 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 9 | C | e5tbzC5 | C:578-712 | RNA_pol_Rpb2_45 | 4042 → 4042.1 → 4042.1.1 |
| 10 | C | e5tbzC6 | C:226-234,C:289-342 | 275.1.1.0 | 275 → 275.1 → 275.1.1 |
| 11 | C | e5tbzC7 | C:828-938,C:1045-1062 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 12 | C | e5tbzC8 | C:235-288 | 275.1.1.0 | 275 → 275.1 → 275.1.1 |
| 13 | C | e5tbzC9 | C:152-225,C:343-451 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 14 | C | e5tbzC10 | C:1240-1341 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 15 | D | e5tbzD1 | D:23-42,D:66-139,D:159-333 | 4246.1.1.0 | 4246 → 4246.1 → 4246.1.1 |
| 16 | D | e5tbzD2 | D:334-377,D:418-498 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 17 | D | e5tbzD3 | D:378-417 | 4951.1.1.0 | 4951 → 4951.1 → 4951.1.1 |
| 18 | D | e5tbzD4 | D:499-638 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 19 | D | e5tbzD5 | D:639-810 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 20 | D | e5tbzD6 | D:811-894 | 275.1.1.0 | 275 → 275.1 → 275.1.1 |
| 21 | D | e5tbzD7 | D:895-936,D:1129-1151,D:1216-1370 | RNA_pol_Rpb1_5 | 4954 → 4954.1 → 4954.1.1 |
| 22 | D | e5tbzD8 | D:1152-1215 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 23 | D | e5tbzD9 | D:941-1022 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 24 | D | e5tbzD10 | D:1023-1128 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 25 | F | e5tbzF1 | F:10-52,F:174-234 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 26 | F | e5tbzF2 | F:53-173 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 27 | G | e5tbzG1 | G:4-52,G:174-232 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 28 | G | e5tbzG2 | G:53-173 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 29 | H | e5tbzH1 | H:791-827,H:1063-1239 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 30 | H | e5tbzH2 | H:1240-1341 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 31 | H | e5tbzH3 | H:828-938,H:1045-1062 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 32 | H | e5tbzH4 | H:713-790 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 33 | H | e5tbzH5 | H:578-712 | RNA_pol_Rpb2_45 | 4042 → 4042.1 → 4042.1.1 |
| 34 | H | e5tbzH6 | H:939-983,H:1004-1044 | 3681.1.1.0 | 3681 → 3681.1 → 3681.1.1 |
| 35 | H | e5tbzH7 | H:152-225,H:343-451 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 36 | H | e5tbzH8 | H:3-151,H:452-577 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 37 | H | e5tbzH9 | H:235-288 | 275.1.1.0 | 275 → 275.1 → 275.1.1 |
| 38 | H | e5tbzH10 | H:226-234,H:289-342 | 275.1.1.0 | 275 → 275.1 → 275.1.1 |
| 39 | I | e5tbzI1 | I:41-139,I:160-341 | RNA_pol_Rpb1_1 | 4246 → 4246.1 → 4246.1.1 |
| 40 | I | e5tbzI2 | I:639-810 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 41 | I | e5tbzI3 | I:1214-1370 | RNA_pol_Rpb1_5 | 4954 → 4954.1 → 4954.1.1 |
| 42 | I | e5tbzI4 | I:499-638 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 43 | I | e5tbzI5 | I:334-498 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 44 | I | e5tbzI6 | I:1023-1128 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 45 | I | e5tbzI7 | I:811-894 | 275.1.1.0 | 275 → 275.1 → 275.1.1 |
| 46 | I | e5tbzI8 | I:944-1022 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 47 | I | e5tbzI9 | I:1152-1215 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 48 | J | e5tbzJ1 | J:8-46,J:67-123 | NusG | 304 → 304.17 → 304.17.1 |
| 49 | J | e5tbzJ2 | J:123-181 | KOW | 4 → 4.1 → 4.1.1 |
| 50 | K | e5tbzK1 | K:8-46,K:67-123 | NusG | 304 → 304.17 → 304.17.1 |
| 51 | K | e5tbzK2 | K:123-181 | KOW | 4 → 4.1 → 4.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors