PDB 5U0S
ELECTRON MICROSCOPY0 chains40 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain 3view chain
1 domainChain aview chain
8 domainsChain bview chain
7 domainsChain cview chain
2 domainsChain dview chain
1 domainChain eview chain
2 domainsChain fview chain
1 domainChain Fview chain
1 domainChain gview chain
2 domainsChain Gview chain
2 domainsChain hview chain
1 domainChain Hview chain
1 domainChain iview chain
2 domainsChain jview chain
1 domainChain kview chain
1 domainChain Kview chain
1 domainChain lview chain
1 domainChain Qview chain
1 domainChain Rview chain
1 domainChain Tview chain
1 domainChain Uview chain
1 domainChain Vview chain
1 domainAll Domains (40)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | 3 | e5u0s31 | 3:2-104 | 3548.1.1.0 | 3548 → 3548.1 → 3548.1.1 |
| 2 | a | e5u0sa1 | a:526-668 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 3 | a | e5u0sa2 | a:1272-1337 | 4956.1.1.0 | 4956 → 4956.1 → 4956.1.1 |
| 4 | a | e5u0sa3 | a:2-342 | RNA_pol_Rpb1_1 | 4246 → 4246.1 → 4246.1.1 |
| 5 | a | e5u0sa4 | a:878-1062 | RNA_pol_Rpb1_6 | 4957 → 4957.1 → 4957.1.1 |
| 6 | a | e5u0sa5 | a:1145-1278 | RNA_pol_Rpb1_7 | 4955 → 4955.1 → 4955.1.1 |
| 7 | a | e5u0sa6 | a:340-525 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 8 | a | e5u0sa7 | a:669-877 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 9 | a | e5u0sa8 | a:1063-1116,a:1338-1456 | RNA_pol_Rpb1_5 | 4954 → 4954.1 → 4954.1.1 |
| 10 | b | e5u0sb1 | b:840-963 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 11 | b | e5u0sb2 | b:204-390 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 12 | b | e5u0sb3 | b:10-57,b:77-121,b:149-203,b:391-527 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 13 | b | e5u0sb4 | b:528-616 | RNA_pol_Rpb2_4 | 4961 → 4961.1 → 4961.1.1 |
| 14 | b | e5u0sb5 | b:1087-1210 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 15 | b | e5u0sb6 | b:803-839,b:964-1086 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 16 | b | e5u0sb7 | b:617-802 | 4042.1.1.0 | 4042 → 4042.1 → 4042.1.1 |
| 17 | c | e5u0sc1 | c:4-36,c:174-266 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 18 | c | e5u0sc2 | c:37-173 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 19 | d | e5u0sd1 | d:6-130 | RNA_pol_Rpb4 | 102 → 102.1 → 102.1.1 |
| 20 | e | e5u0se1 | e:4-138 | RNA_pol_Rpb5_N | 2008 → 2008.3 → 2008.3.1 |
| 21 | e | e5u0se2 | e:139-210 | RNA_pol_Rpb5_C | 840 → 840.1 → 840.1.1 |
| 22 | f | e5u0sf1 | f:60-142 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.1 |
| 23 | F | e5u0sF1 | F:9-158 | Med6 | 3195 → 3195.1 → 3195.1.1 |
| 24 | g | e5u0sg1 | g:70-172 | S1 | 2 → 2.1 → 2.1.1 |
| 25 | g | e5u0sg2 | g:3-69 | SHS2_Rpb7-N | 872 → 872.1 → 872.1.1 |
| 26 | G | e5u0sG1 | G:11-86 | 3548.1.1.0 | 3548 → 3548.1 → 3548.1.1 |
| 27 | G | e5u0sG2 | G:219-315 | Med7 | 4207 → 4207.1 → 4207.1.2 |
| 28 | h | e5u0sh1 | h:2-125 | RNA_pol_Rpb8 | 2 → 2.1 → 2.1.1 |
| 29 | H | e5u0sH1 | H:3-200 | 3560.1.1.0 | 3560 → 3560.1 → 3560.1.1 |
| 30 | i | e5u0si1 | i:51-113 | TFIIS_C | 375 → 375.1 → 375.1.1 |
| 31 | i | e5u0si2 | i:3-50 | RNA_POL_M_15KD | 375 → 375.1 → 375.1.1 |
| 32 | j | e5u0sj1 | j:1-64 | RNA_pol_N | 101 → 101.4 → 101.4.1 |
| 33 | k | e5u0sk1 | k:1-119 | RNA_pol_L_2 | 305 → 305.1 → 305.1.1 |
| 34 | K | e5u0sK1 | K:15-112 | Med11 | 3712 → 3712.1 → 3712.1.1 |
| 35 | l | e5u0sl1 | l:19-63 | DNA_RNApol_7kD | 375 → 375.1 → 375.1.1 |
| 36 | Q | e5u0sQ1 | Q:99-352,Q:378-538 | 3561.1.1.0 | 3561 → 3561.1 → 3561.1.1 |
| 37 | R | e5u0sR1 | R:1-207 | Med18 | 868 → 868.1 → 868.1.1 |
| 38 | T | e5u0sT1 | T:2-187 | Med20 | 868 → 868.1 → 868.1.1 |
| 39 | U | e5u0sU1 | U:1-138 | Med21 | 4207 → 4207.1 → 4207.1.1 |
| 40 | V | e5u0sV1 | V:5-122 | 3559.1.1.0 | 3559 → 3559.1 → 3559.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors