PDB 5UM8
X-RAY DIFFRACTION3.94 Å0 chains12 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Bview chain
1 domainChain Dview chain
2 domainsChain Eview chain
2 domainsChain Hview chain
2 domainsChain Lview chain
2 domainsAll Domains (12)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | B | e5um8B1 | B:521-547,B:569-662 | GP41 | 3567 → 3567.1 → 3567.1.1 |
| 2 | D | e5um8D1 | D:113-222 | C1-set | 11 → 11.1 → 11.1.1 |
| 3 | D | e5um8D2 | D:1-112 | V-set | 11 → 11.1 → 11.1.1 |
| 4 | E | e5um8E1 | E:2-111 | V-set | 11 → 11.1 → 11.1.1 |
| 5 | E | e5um8E2 | E:112-214 | C1-set | 11 → 11.1 → 11.1.1 |
| 6 | G | e5um8G1 | G:32-119,G:203-255,G:474-510 | GP120 | 1061 → 1061.1 → 1061.1.1 |
| 7 | G | e5um8G2 | G:120-202 | GP120 | 6173 → 6173.1 → 6173.1.1 |
| 8 | G | e5um8G3 | G:256-473 | GP120 | 259 → 259.1 → 259.1.1 |
| 9 | H | e5um8H1 | H:1-110 | V-set | 11 → 11.1 → 11.1.1 |
| 10 | H | e5um8H2 | H:111-214 | C1-set | 11 → 11.1 → 11.1.1 |
| 11 | L | e5um8L1 | L:6-108 | V-set | 11 → 11.1 → 11.1.1 |
| 12 | L | e5um8L2 | L:109-210 | C1-set | 11 → 11.1 → 11.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors