ECODEvolutionary Classification of Protein Domains

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PDB 5VK3

X-RAY DIFFRACTION2.11 Å0 chains10 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain Aview chain

2 domains

e5vk3A1(A:357-415,A:489-506)e5vk3A2(A:7-356,A:507-560)

Chain Bview chain

8 domains

e5vk3B1(B:2550-2685)e5vk3B2(B:195-325)e5vk3B3(B:726-792)e5vk3B4(B:643-725)e5vk3B5(B:555-642)e5vk3B6(B:793-928)e5vk3B7(B:490-554)e5vk3B8(B:360-479)

All Domains (10)

#	Chain	Domain ID	Range	Family	Classification
1	A	e5vk3A1	A:357-415,A:489-506	PRC2_EED_ins	1094 → 1094.1 → 1094.1.1
2	A	e5vk3A2	A:7-356,A:507-560	WD40	5 → 5.1 → 5.1.4
3	B	e5vk3B1	B:2550-2685	VEFS-Box	186 → 186.2 → 186.2.1
4	B	e5vk3B2	B:195-325	EZH2_N	1020 → 1020.1 → 1020.1.1
5	B	e5vk3B3	B:726-792	preSET_CXC	3358 → 3358.1 → 3358.1.1
6	B	e5vk3B4	B:643-725	Ezh2-like__CXC_fung	3358 → 3358.1 → 3358.1.1
7	B	e5vk3B5	B:555-642	101.1.1.0	101 → 101.1 → 101.1.1
8	B	e5vk3B6	B:793-928	SET	70 → 70.3 → 70.3.1
9	B	e5vk3B7	B:490-554	Ezh2_MCSS_fung	1019 → 1019.1 → 1019.1.1
10	B	e5vk3B8	B:360-479	101.1.1.0	101 → 101.1 → 101.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors