ECODEvolutionary Classification of Protein Domains

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PDB 5VNH

X-RAY DIFFRACTION2.60 Å0 chains11 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain Aview chain

5 domains

e5vnhA1(A:3-50,A:394-517)e5vnhA2(A:50-124)e5vnhA3(A:125-205,A:225-393)e5vnhA4(A:621-723,A:746-764)e5vnhA5(A:518-620)

Chain Bview chain

5 domains

e5vnhB1(B:944-1093)e5vnhB2(B:501-743)e5vnhB3(B:839-943)e5vnhB4(B:416-500)e5vnhB5(B:346-415,B:744-838)

Chain Cview chain

1 domain

e5vnhC1(C:1-157)

All Domains (11)

#	Chain	Domain ID	Range	Family	Classification
1	A	e5vnhA1	A:3-50,A:394-517	Sec23_BS	11 → 11.1 → 11.1.5
2	A	e5vnhA2	A:50-124	zf-Sec23_Sec24	375 → 375.1 → 375.1.1
3	A	e5vnhA3	A:125-205,A:225-393	Sec23_trunk	2006 → 2006.1 → 2006.1.6
4	A	e5vnhA4	A:621-723,A:746-764	Gelsolin	224 → 224.1 → 224.1.1
5	A	e5vnhA5	A:518-620	Sec23_helical	610 → 610.2 → 610.2.1
6	B	e5vnhB1	B:944-1093	Gelsolin	224 → 224.1 → 224.1.1
7	B	e5vnhB2	B:501-743	Sec23_trunk	2006 → 2006.1 → 2006.1.6
8	B	e5vnhB3	B:839-943	Sec23_helical	610 → 610.2 → 610.2.1
9	B	e5vnhB4	B:416-500	zf-Sec23_Sec24	375 → 375.1 → 375.1.1
10	B	e5vnhB5	B:346-415,B:744-838	Sec23_BS	11 → 11.1 → 11.1.5
11	C	e5vnhC1	C:1-157	Longin	223 → 223.2 → 223.2.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors